RNA–Protein interactions for RNA: ENST00000426763.3

RPL28-202, Transcript of ribosomal protein L28, humanhuman

TSL 1 (best)

Gene RPL28, Length 5,620 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-202ENST00000426763 SYNE3Q6ZMZ3 975 aa17■□□□□ 0.31
RPL28-202ENST00000426763 FBXW7Q969H0 707 aa17■□□□□ 0.31
RPL28-202ENST00000426763 L1TD1Q5T7N2 865 aaKnown RBP17■□□□□ 0.31
RPL28-202ENST00000426763 APPP05067 770 aa17■□□□□ 0.31
RPL28-202ENST00000426763 PDE4AP27815 886 aa17■□□□□ 0.31
RPL28-202ENST00000426763 NEUROD6Q96NK8 337 aa16.99■□□□□ 0.31
RPL28-202ENST00000426763 PBRM1Q86U86 1689 aa16.99■□□□□ 0.31
RPL28-202ENST00000426763 SF3B2Q13435 895 aaKnown RBP16.99■□□□□ 0.31
RPL28-202ENST00000426763 CT47B1P0C2W7 299 aaPredicted RBP16.99■□□□□ 0.31
RPL28-202ENST00000426763 KLHL34Q8N239 644 aa16.99■□□□□ 0.31
RPL28-202ENST00000426763 IPO9Q96P70 1041 aaKnown RBP16.99■□□□□ 0.31
RPL28-202ENST00000426763 TRAPPC8Q9Y2L5 1435 aa16.99■□□□□ 0.31
RPL28-202ENST00000426763 FOXD4L1Q9NU39 408 aa16.99■□□□□ 0.31
RPL28-202ENST00000426763 TSR2Q969E8 191 aaKnown RBP16.98■□□□□ 0.31
RPL28-202ENST00000426763 AKAP17AQ02040 695 aaKnown RBP16.98■□□□□ 0.31
RPL28-202ENST00000426763 DRC7Q8IY82 874 aa16.98■□□□□ 0.31
RPL28-202ENST00000426763 UHRF1BP1LA0JNW5 1464 aa16.98■□□□□ 0.31
RPL28-202ENST00000426763 LRPPRCP42704 1394 aaKnown RBP16.98■□□□□ 0.31
RPL28-202ENST00000426763 RASSF8Q8NHQ8 419 aa16.98■□□□□ 0.31
RPL28-202ENST00000426763 SLC4A2P04920 1241 aa16.97■□□□□ 0.31
RPL28-202ENST00000426763 RNF20Q5VTR2 975 aa16.97■□□□□ 0.31
RPL28-202ENST00000426763 CPLX2Q6PUV4 134 aaKnown RBP16.97■□□□□ 0.31
RPL28-202ENST00000426763 LNPKQ9C0E8 428 aa16.97■□□□□ 0.31
RPL28-202ENST00000426763 FOXO3O43524 673 aa16.97■□□□□ 0.31
RPL28-202ENST00000426763 FAM184AQ8NB25 1140 aa16.96■□□□□ 0.31
RPL28-202ENST00000426763 NME9Q86XW9 330 aa16.96■□□□□ 0.31
RPL28-202ENST00000426763 NFE2L2Q16236 605 aa16.96■□□□□ 0.31
RPL28-202ENST00000426763 FAM177BA6PVY3 158 aa16.95■□□□□ 0.3
RPL28-202ENST00000426763 H3BQV1 296 aa16.95■□□□□ 0.3
RPL28-202ENST00000426763 IFFO2Q5TF58 517 aa16.95■□□□□ 0.3
RPL28-202ENST00000426763 TRDNQ13061 729 aa16.95■□□□□ 0.3
RPL28-202ENST00000426763 INTS3Q68E01 1043 aaKnown RBP16.95■□□□□ 0.3
RPL28-202ENST00000426763 MARCH6O60337 910 aa16.95■□□□□ 0.3
RPL28-202ENST00000426763 BTBD11A6QL63 1104 aa16.94■□□□□ 0.3
RPL28-202ENST00000426763 ANO2Q9NQ90 1003 aa16.94■□□□□ 0.3
RPL28-202ENST00000426763 GNAT3A8MTJ3 354 aa16.94■□□□□ 0.3
RPL28-202ENST00000426763 CLASRPQ8N2M8 674 aaKnown RBP16.94■□□□□ 0.3
RPL28-202ENST00000426763 CCT4P50991 539 aaKnown RBP16.94■□□□□ 0.3
RPL28-202ENST00000426763 NINLQ9Y2I6 1382 aa16.93■□□□□ 0.3
RPL28-202ENST00000426763 SURF6O75683 361 aaKnown RBP16.93■□□□□ 0.3
RPL28-202ENST00000426763 PDE3AQ14432 1141 aa16.93■□□□□ 0.3
RPL28-202ENST00000426763 SF3A1Q15459 793 aaKnown RBP16.93■□□□□ 0.3
RPL28-202ENST00000426763 CADPS2Q86UW7 1296 aa16.93■□□□□ 0.3
RPL28-202ENST00000426763 NOB1Q9ULX3 412 aaKnown RBP16.93■□□□□ 0.3
RPL28-202ENST00000426763 GNAI2P04899 355 aa16.93■□□□□ 0.3
RPL28-202ENST00000426763 ABCA5Q8WWZ7 1642 aa16.93■□□□□ 0.3
RPL28-202ENST00000426763 TPM4P67936 248 aa16.92■□□□□ 0.3
RPL28-202ENST00000426763 TCOF1Q13428 1488 aaKnown RBP16.92■□□□□ 0.3
RPL28-202ENST00000426763 DISP1Q96F81 1524 aa16.92■□□□□ 0.3
RPL28-202ENST00000426763 HMGB2P26583 209 aaKnown RBP16.92■□□□□ 0.3
RPL28-202ENST00000426763 VPS53Q5VIR6 699 aa16.92■□□□□ 0.3
RPL28-202ENST00000426763 PTPRKQ15262 1439 aa16.92■□□□□ 0.3
RPL28-202ENST00000426763 WWC1Q8IX03 1113 aa16.91■□□□□ 0.3
RPL28-202ENST00000426763 KRT28Q7Z3Y7 464 aa16.91■□□□□ 0.3
RPL28-202ENST00000426763 ERC1Q8IUD2 1116 aa16.91■□□□□ 0.3
RPL28-202ENST00000426763 TSHZ2Q9NRE2 1034 aa16.91■□□□□ 0.3
RPL28-202ENST00000426763 TMPOP42166 694 aaKnown RBP16.91■□□□□ 0.3
RPL28-202ENST00000426763 SRCIN1Q9C0H9 1055 aa16.91■□□□□ 0.3
RPL28-202ENST00000426763 ATP6V1DQ9Y5K8 247 aa16.9■□□□□ 0.3
RPL28-202ENST00000426763 NSD2O96028 1365 aa16.9■□□□□ 0.3
RPL28-202ENST00000426763 AMOTQ4VCS5 1084 aa16.9■□□□□ 0.3
RPL28-202ENST00000426763 WASHC4Q2M389 1173 aa16.9■□□□□ 0.3
RPL28-202ENST00000426763 RIMS2Q9UQ26 1411 aa16.9■□□□□ 0.3
RPL28-202ENST00000426763 ZNF428Q96B54 188 aa16.9■□□□□ 0.3
RPL28-202ENST00000426763 SHANK2Q9UPX8 1470 aa16.89■□□□□ 0.29
RPL28-202ENST00000426763 RAD21O60216 631 aa16.89■□□□□ 0.29
RPL28-202ENST00000426763 MYL6BP14649 208 aa16.89■□□□□ 0.29
RPL28-202ENST00000426763 CFAP43Q8NDM7 1665 aa16.89■□□□□ 0.29
RPL28-202ENST00000426763 GZF1Q9H116 711 aaPredicted RBP16.89■□□□□ 0.29
RPL28-202ENST00000426763 CTDP1Q9Y5B0 961 aaPredicted RBP16.89■□□□□ 0.29
RPL28-202ENST00000426763 ERICH2A1L162 156 aa16.88■□□□□ 0.29
RPL28-202ENST00000426763 CNTROBQ8N137 903 aa16.88■□□□□ 0.29
RPL28-202ENST00000426763 CEP170Q5SW79 1584 aa16.88■□□□□ 0.29
RPL28-202ENST00000426763 CPLX1O14810 134 aa16.88■□□□□ 0.29
RPL28-202ENST00000426763 MSH6P52701 1360 aa16.88■□□□□ 0.29
RPL28-202ENST00000426763 TRIM29Q14134 588 aa16.88■□□□□ 0.29
RPL28-202ENST00000426763 CCDC27Q2M243 656 aa16.88■□□□□ 0.29
RPL28-202ENST00000426763 TBC1D2BQ9UPU7 963 aa16.88■□□□□ 0.29
RPL28-202ENST00000426763 FOXD4L5Q5VV16 416 aaPredicted RBP16.87■□□□□ 0.29
RPL28-202ENST00000426763 FOXD4L4Q8WXT5 416 aaPredicted RBP16.87■□□□□ 0.29
RPL28-202ENST00000426763 CNNM1Q9NRU3 951 aa16.87■□□□□ 0.29
RPL28-202ENST00000426763 EMILIN1Q9Y6C2 1016 aa16.87■□□□□ 0.29
RPL28-202ENST00000426763 CDC45O75419 566 aa16.87■□□□□ 0.29
RPL28-202ENST00000426763 BCAR3O75815 825 aa16.87■□□□□ 0.29
RPL28-202ENST00000426763 ADAMTS2O95450 1211 aa16.87■□□□□ 0.29
RPL28-202ENST00000426763 ATF7IPQ6VMQ6 1270 aa16.86■□□□□ 0.29
RPL28-202ENST00000426763 GCC1Q96CN9 775 aa16.86■□□□□ 0.29
RPL28-202ENST00000426763 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.86■□□□□ 0.29
RPL28-202ENST00000426763 FSD1Q9BTV5 496 aa16.86■□□□□ 0.29
RPL28-202ENST00000426763 C11orf95C9JLR9 678 aaPredicted RBP16.86■□□□□ 0.29
RPL28-202ENST00000426763 ACEP12821 1306 aa16.86■□□□□ 0.29
RPL28-202ENST00000426763 MSNP26038 577 aaKnown RBP16.86■□□□□ 0.29
RPL28-202ENST00000426763 STARD3NLO95772 234 aa16.85■□□□□ 0.29
RPL28-202ENST00000426763 CHAF1AQ13111 956 aaPredicted RBP16.85■□□□□ 0.29
RPL28-202ENST00000426763 NFXL1Q6ZNB6 911 aa16.85■□□□□ 0.29
RPL28-202ENST00000426763 TMOD3Q9NYL9 352 aa16.85■□□□□ 0.29
RPL28-202ENST00000426763 TTC21BQ7Z4L5 1316 aa16.85■□□□□ 0.29
RPL28-202ENST00000426763 RALYLQ86SE5 291 aaKnown RBP16.85■□□□□ 0.29
RPL28-202ENST00000426763 PHF14O94880 888 aa16.85■□□□□ 0.29
RPL28-202ENST00000426763 DHX16O60231 1041 aaKnown RBP16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 190.3 ms