RNA–Protein interactions for RNA: ENST00000426546.6

CCDC107-206, Transcript of coiled-coil domain containing 107, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCDC107, Length 1,242 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107-206ENST00000426546 NBPF1Q3BBV0 1214 aa28.95■■■□□ 2.22
CCDC107-206ENST00000426546 CCDC9Q9Y3X0 531 aaKnown RBP28.95■■■□□ 2.22
CCDC107-206ENST00000426546 NGDNQ8NEJ9 315 aaKnown RBP28.94■■■□□ 2.22
CCDC107-206ENST00000426546 NUDT16Q96DE0 195 aaKnown RBP28.93■■■□□ 2.22
CCDC107-206ENST00000426546 CRYBG1Q9Y4K1 1723 aa28.93■■■□□ 2.22
CCDC107-206ENST00000426546 KRT27Q7Z3Y8 459 aa28.92■■■□□ 2.22
CCDC107-206ENST00000426546 NRAPQ86VF7 1730 aa28.91■■■□□ 2.22
CCDC107-206ENST00000426546 SF3B2Q13435 895 aaKnown RBP28.91■■■□□ 2.22
CCDC107-206ENST00000426546 CDK19Q9BWU1 502 aa28.91■■■□□ 2.22
CCDC107-206ENST00000426546 L3MBTL2Q969R5 705 aa28.89■■■□□ 2.22
CCDC107-206ENST00000426546 QRICH2Q9H0J4 1663 aa28.87■■■□□ 2.21
CCDC107-206ENST00000426546 COL14A1Q05707 1796 aaKnown RBP28.87■■■□□ 2.21
CCDC107-206ENST00000426546 POLR3AO14802 1390 aaPredicted RBP28.87■■■□□ 2.21
CCDC107-206ENST00000426546 TRPM1Q7Z4N2 1603 aa28.87■■■□□ 2.21
CCDC107-206ENST00000426546 CENPJQ9HC77 1338 aaPredicted RBP28.86■■■□□ 2.21
CCDC107-206ENST00000426546 BTG4Q9NY30 223 aa28.85■■■□□ 2.21
CCDC107-206ENST00000426546 CCDC61Q9Y6R9 512 aa28.85■■■□□ 2.21
CCDC107-206ENST00000426546 PAK3O75914 559 aaPredicted RBP28.84■■■□□ 2.21
CCDC107-206ENST00000426546 SIN3AQ96ST3 1273 aa28.84■■■□□ 2.21
CCDC107-206ENST00000426546 A0A0G2JS52 829 aa28.83■■■□□ 2.21
CCDC107-206ENST00000426546 MYT1Q01538 1121 aa28.83■■■□□ 2.21
CCDC107-206ENST00000426546 FAM98CQ17RN3 349 aaKnown RBP28.83■■■□□ 2.21
CCDC107-206ENST00000426546 PHRF1Q9P1Y6 1649 aaKnown RBP28.81■■■□□ 2.2
CCDC107-206ENST00000426546 PLEKHG3A1L390 1219 aa28.81■■■□□ 2.2
CCDC107-206ENST00000426546 ACEP12821 1306 aa28.8■■■□□ 2.2
CCDC107-206ENST00000426546 NEUROD1Q13562 356 aa28.77■■■□□ 2.2
CCDC107-206ENST00000426546 NBPF8Q3BBV2 869 aa28.77■■■□□ 2.2
CCDC107-206ENST00000426546 LRP5O75197 1615 aa28.76■■■□□ 2.2
CCDC107-206ENST00000426546 SPATA31A5Q5VU36 1347 aa28.76■■■□□ 2.19
CCDC107-206ENST00000426546 SPATA31A7Q8IWB4 1347 aa28.76■■■□□ 2.19
CCDC107-206ENST00000426546 BAG6P46379 1132 aa28.76■■■□□ 2.19
CCDC107-206ENST00000426546 SRPK2P78362 688 aaKnown RBP28.76■■■□□ 2.19
CCDC107-206ENST00000426546 PPIP5K1Q6PFW1 1433 aa28.76■■■□□ 2.19
CCDC107-206ENST00000426546 THSD7AQ9UPZ6 1657 aa28.73■■■□□ 2.19
CCDC107-206ENST00000426546 ROCK2O75116 1388 aaKnown RBP28.73■■■□□ 2.19
CCDC107-206ENST00000426546 PRDM11Q9NQV5 511 aa28.72■■■□□ 2.19
CCDC107-206ENST00000426546 FAM182BQ5T319 152 aa28.71■■■□□ 2.19
CCDC107-206ENST00000426546 CABP2Q9NPB3 220 aa28.71■■■□□ 2.19
CCDC107-206ENST00000426546 RGPD1P0DJD0 1748 aa28.71■■■□□ 2.19
CCDC107-206ENST00000426546 PSDA5PKW4 1024 aaPredicted RBP28.7■■■□□ 2.18
CCDC107-206ENST00000426546 BRD4O60885 1362 aaPredicted RBP28.7■■■□□ 2.18
CCDC107-206ENST00000426546 KIAA0232Q92628 1395 aa28.69■■■□□ 2.18
CCDC107-206ENST00000426546 NRKQ7Z2Y5 1582 aa28.69■■■□□ 2.18
CCDC107-206ENST00000426546 EN1Q05925 392 aaPredicted RBP28.68■■■□□ 2.18
CCDC107-206ENST00000426546 EVC2Q86UK5 1308 aa28.67■■■□□ 2.18
CCDC107-206ENST00000426546 NUTM2GQ5VZR2 741 aa28.66■■■□□ 2.18
CCDC107-206ENST00000426546 ABTB2Q8N961 1025 aa28.66■■■□□ 2.18
CCDC107-206ENST00000426546 USP19O94966 1318 aa28.66■■■□□ 2.18
CCDC107-206ENST00000426546 TNS1Q9HBL0 1735 aaKnown RBP28.65■■■□□ 2.18
CCDC107-206ENST00000426546 SPATA31A1Q5TZJ5 1347 aa28.65■■■□□ 2.18
CCDC107-206ENST00000426546 DISP2A7MBM2 1401 aa28.64■■■□□ 2.18
CCDC107-206ENST00000426546 USP6P35125 1406 aa28.63■■■□□ 2.17
CCDC107-206ENST00000426546 CHRNA2Q15822 529 aa28.63■■■□□ 2.17
CCDC107-206ENST00000426546 ZC3H6P61129 1189 aaKnown RBP28.62■■■□□ 2.17
CCDC107-206ENST00000426546 CABP1Q9NZU7 370 aa28.62■■■□□ 2.17
CCDC107-206ENST00000426546 NLRP13Q86W25 1043 aa28.61■■■□□ 2.17
CCDC107-206ENST00000426546 CPDO75976 1380 aa28.61■■■□□ 2.17
CCDC107-206ENST00000426546 STRN4Q9NRL3 753 aa28.6■■■□□ 2.17
CCDC107-206ENST00000426546 LMO7Q8WWI1 1683 aa28.6■■■□□ 2.17
CCDC107-206ENST00000426546 TONSLQ96HA7 1378 aa28.57■■■□□ 2.16
CCDC107-206ENST00000426546 SBNO2Q9Y2G9 1366 aa28.57■■■□□ 2.16
CCDC107-206ENST00000426546 AKAP12Q02952 1782 aa28.57■■■□□ 2.16
CCDC107-206ENST00000426546 R3HDM1Q15032 1099 aaKnown RBP28.56■■■□□ 2.16
CCDC107-206ENST00000426546 EZH2Q15910 746 aaKnown RBP28.56■■■□□ 2.16
CCDC107-206ENST00000426546 SSH2Q76I76 1423 aa28.56■■■□□ 2.16
CCDC107-206ENST00000426546 PIK3C2AO00443 1686 aa28.55■■■□□ 2.16
CCDC107-206ENST00000426546 CAMTA1Q9Y6Y1 1673 aa28.55■■■□□ 2.16
CCDC107-206ENST00000426546 GCP02774 474 aa28.55■■■□□ 2.16
CCDC107-206ENST00000426546 FAM196AQ6ZSG2 479 aa28.55■■■□□ 2.16
CCDC107-206ENST00000426546 TRIM37O94972 964 aa28.54■■■□□ 2.16
CCDC107-206ENST00000426546 TRIM26Q12899 539 aaPredicted RBP28.54■■■□□ 2.16
CCDC107-206ENST00000426546 SLIT3O75094 1523 aa28.53■■■□□ 2.16
CCDC107-206ENST00000426546 CAMKK2Q96RR4 588 aa28.53■■■□□ 2.16
CCDC107-206ENST00000426546 CARD11Q9BXL7 1154 aa28.52■■■□□ 2.16
CCDC107-206ENST00000426546 USP35Q9P2H5 1018 aa28.52■■■□□ 2.16
CCDC107-206ENST00000426546 BARGINQ6ZT62 677 aa28.51■■■□□ 2.15
CCDC107-206ENST00000426546 ZNF692Q9BU19 519 aaPredicted RBP28.51■■■□□ 2.15
CCDC107-206ENST00000426546 NLRP6P59044 892 aa28.5■■■□□ 2.15
CCDC107-206ENST00000426546 EVA1CP58658 441 aa28.49■■■□□ 2.15
CCDC107-206ENST00000426546 CPSF1Q10570 1443 aaKnown RBP28.49■■■□□ 2.15
CCDC107-206ENST00000426546 LARP1Q6PKG0 1096 aaKnown RBP28.47■■■□□ 2.15
CCDC107-206ENST00000426546 COL5A2P05997 1499 aaPredicted RBP28.46■■■□□ 2.15
CCDC107-206ENST00000426546 MON2Q7Z3U7 1717 aa28.46■■■□□ 2.15
CCDC107-206ENST00000426546 APBA3O96018 575 aa28.46■■■□□ 2.15
CCDC107-206ENST00000426546 PARD3Q8TEW0 1356 aa28.46■■■□□ 2.15
CCDC107-206ENST00000426546 PDE3BQ13370 1112 aa28.45■■■□□ 2.14
CCDC107-206ENST00000426546 TTC21BQ7Z4L5 1316 aa28.44■■■□□ 2.14
CCDC107-206ENST00000426546 TTC21AQ8NDW8 1320 aa28.44■■■□□ 2.14
CCDC107-206ENST00000426546 TCP11L2Q8N4U5 519 aa28.44■■■□□ 2.14
CCDC107-206ENST00000426546 AATKQ6ZMQ8 1374 aa28.44■■■□□ 2.14
CCDC107-206ENST00000426546 RREB1Q92766 1687 aa28.43■■■□□ 2.14
CCDC107-206ENST00000426546 COL18A1P39060 1754 aa28.42■■■□□ 2.14
CCDC107-206ENST00000426546 KTN1Q86UP2 1357 aaKnown RBP28.42■■■□□ 2.14
CCDC107-206ENST00000426546 THRAP3Q9Y2W1 955 aaKnown RBP28.41■■■□□ 2.14
CCDC107-206ENST00000426546 CRB1P82279 1406 aa28.39■■■□□ 2.14
CCDC107-206ENST00000426546 NUP188Q5SRE5 1749 aa28.39■■■□□ 2.14
CCDC107-206ENST00000426546 PARP4Q9UKK3 1724 aaKnown RBP28.39■■■□□ 2.14
CCDC107-206ENST00000426546 KCNH5Q8NCM2 988 aa28.38■■■□□ 2.13
CCDC107-206ENST00000426546 USP54Q70EL1 1684 aa28.37■■■□□ 2.13
CCDC107-206ENST00000426546 CD163L1Q9NR16 1453 aa28.36■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 114.9 ms