RNA–Protein interactions for RNA: ENST00000426059.1

FN1-208, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 2,388 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-208ENST00000426059 SUPT16HQ9Y5B9 1047 aaKnown RBP23.11■■□□□ 1.29
FN1-208ENST00000426059 PPM1GO15355 546 aaPredicted RBP23.1■■□□□ 1.29
FN1-208ENST00000426059 TTC21BQ7Z4L5 1316 aa23.1■■□□□ 1.29
FN1-208ENST00000426059 USP6P35125 1406 aa23.09■■□□□ 1.29
FN1-208ENST00000426059 PROSER2Q86WR7 435 aaPredicted RBP23.09■■□□□ 1.29
FN1-208ENST00000426059 INSRP06213 1382 aa23.09■■□□□ 1.29
FN1-208ENST00000426059 LMTK3Q96Q04 1460 aa23.09■■□□□ 1.29
FN1-208ENST00000426059 COG3Q96JB2 828 aa23.07■■□□□ 1.28
FN1-208ENST00000426059 MAP2P11137 1827 aaKnown RBP23.07■■□□□ 1.28
FN1-208ENST00000426059 NRKQ7Z2Y5 1582 aa23.07■■□□□ 1.28
FN1-208ENST00000426059 ADGRL3Q9HAR2 1447 aa23.07■■□□□ 1.28
FN1-208ENST00000426059 POLKQ9UBT6 870 aa23.06■■□□□ 1.28
FN1-208ENST00000426059 NWD1Q149M9 1564 aa23.06■■□□□ 1.28
FN1-208ENST00000426059 CDCA7LQ96GN5 454 aa23.06■■□□□ 1.28
FN1-208ENST00000426059 APAF1O14727 1248 aa23.05■■□□□ 1.28
FN1-208ENST00000426059 EMILIN1Q9Y6C2 1016 aa23.05■■□□□ 1.28
FN1-208ENST00000426059 ANKARQ7Z5J8 1434 aa23.05■■□□□ 1.28
FN1-208ENST00000426059 STRCP1A6NGW2 1772 aa23.04■■□□□ 1.28
FN1-208ENST00000426059 RRS1Q15050 365 aaKnown RBP23.04■■□□□ 1.28
FN1-208ENST00000426059 NUDCQ9Y266 331 aa23.04■■□□□ 1.28
FN1-208ENST00000426059 SMG6Q86US8 1419 aaKnown RBP23.03■■□□□ 1.28
FN1-208ENST00000426059 U2AF1L5P0DN76 240 aaPredicted RBP23.03■■□□□ 1.28
FN1-208ENST00000426059 U2AF1Q01081 240 aaKnown RBP eCLIP23.03■■□□□ 1.28
FN1-208ENST00000426059 FKBP8Q14318 412 aa23.03■■□□□ 1.28
FN1-208ENST00000426059 U2SURPO15042 1029 aaKnown RBP23.02■■□□□ 1.28
FN1-208ENST00000426059 SOX12O15370 315 aa23.02■■□□□ 1.28
FN1-208ENST00000426059 SSH2Q76I76 1423 aa23.02■■□□□ 1.28
FN1-208ENST00000426059 ESCO1Q5FWF5 840 aa23.01■■□□□ 1.27
FN1-208ENST00000426059 COL3A1P02461 1466 aaPredicted RBP23.01■■□□□ 1.27
FN1-208ENST00000426059 PHF8Q9UPP1 1060 aa23■■□□□ 1.27
FN1-208ENST00000426059 STRCQ7RTU9 1775 aa23■■□□□ 1.27
FN1-208ENST00000426059 IRX6P78412 446 aaPredicted RBP22.99■■□□□ 1.27
FN1-208ENST00000426059 NUTM2GQ5VZR2 741 aa22.99■■□□□ 1.27
FN1-208ENST00000426059 ORAI2Q96SN7 254 aa22.98■■□□□ 1.27
FN1-208ENST00000426059 DIAPH1O60610 1272 aaKnown RBP22.98■■□□□ 1.27
FN1-208ENST00000426059 PAK3O75914 559 aaPredicted RBP22.98■■□□□ 1.27
FN1-208ENST00000426059 NEUROD2Q15784 382 aa22.98■■□□□ 1.27
FN1-208ENST00000426059 PNPLA6Q8IY17 1366 aa22.97■■□□□ 1.27
FN1-208ENST00000426059 RRP7AQ9Y3A4 280 aaKnown RBP22.97■■□□□ 1.27
FN1-208ENST00000426059 OVOS2A0A0J9YW53 1432 aa22.96■■□□□ 1.27
FN1-208ENST00000426059 OVOS2Q6IE36 1432 aa22.96■■□□□ 1.27
FN1-208ENST00000426059 TMEM94Q12767 1356 aa22.96■■□□□ 1.27
FN1-208ENST00000426059 NEFLP07196 543 aa22.95■■□□□ 1.26
FN1-208ENST00000426059 RUNDC1Q96C34 613 aa22.95■■□□□ 1.26
FN1-208ENST00000426059 TTC21AQ8NDW8 1320 aa22.95■■□□□ 1.26
FN1-208ENST00000426059 AATKQ6ZMQ8 1374 aa22.94■■□□□ 1.26
FN1-208ENST00000426059 PDE3BQ13370 1112 aa22.94■■□□□ 1.26
FN1-208ENST00000426059 C19orf44Q9H6X5 657 aa22.94■■□□□ 1.26
FN1-208ENST00000426059 PIK3C2AO00443 1686 aa22.94■■□□□ 1.26
FN1-208ENST00000426059 TCP11L2Q8N4U5 519 aa22.93■■□□□ 1.26
FN1-208ENST00000426059 XPCQ01831 940 aaPredicted RBP22.93■■□□□ 1.26
FN1-208ENST00000426059 ZNF521Q96K83 1311 aa22.93■■□□□ 1.26
FN1-208ENST00000426059 NLRP6P59044 892 aa22.92■■□□□ 1.26
FN1-208ENST00000426059 FOXO3O43524 673 aa22.92■■□□□ 1.26
FN1-208ENST00000426059 ABTB2Q8N961 1025 aa22.91■■□□□ 1.26
FN1-208ENST00000426059 PSME1Q06323 249 aa22.91■■□□□ 1.26
FN1-208ENST00000426059 DMRT2Q9Y5R5 561 aa22.9■■□□□ 1.26
FN1-208ENST00000426059 SPINK5Q9NQ38 1064 aaPredicted RBP22.89■■□□□ 1.26
FN1-208ENST00000426059 ZNF335Q9H4Z2 1342 aaPredicted RBP22.88■■□□□ 1.25
FN1-208ENST00000426059 CDK12Q9NYV4 1490 aaPredicted RBP22.88■■□□□ 1.25
FN1-208ENST00000426059 HMOX1P09601 288 aa22.88■■□□□ 1.25
FN1-208ENST00000426059 GOLGA2Q08379 1002 aa22.88■■□□□ 1.25
FN1-208ENST00000426059 USP31Q70CQ4 1352 aa22.88■■□□□ 1.25
FN1-208ENST00000426059 ATF3P18847 181 aa22.87■■□□□ 1.25
FN1-208ENST00000426059 PLEKHF1Q96S99 279 aa22.87■■□□□ 1.25
FN1-208ENST00000426059 PLEKHG5O94827 1062 aa22.87■■□□□ 1.25
FN1-208ENST00000426059 IL13P35225 146 aa22.87■■□□□ 1.25
FN1-208ENST00000426059 IQSEC2Q5JU85 1478 aa22.87■■□□□ 1.25
FN1-208ENST00000426059 C1orf167Q5SNV9 1468 aa22.86■■□□□ 1.25
FN1-208ENST00000426059 WWC1Q8IX03 1113 aa22.86■■□□□ 1.25
FN1-208ENST00000426059 HSP90AB2PQ58FF8 381 aa22.85■■□□□ 1.25
FN1-208ENST00000426059 PEAK1Q9H792 1746 aa22.85■■□□□ 1.25
FN1-208ENST00000426059 MARF1Q9Y4F3 1742 aaKnown RBP22.85■■□□□ 1.25
FN1-208ENST00000426059 MAP3K19Q56UN5 1328 aa22.84■■□□□ 1.25
FN1-208ENST00000426059 DUSP27Q5VZP5 1158 aa22.83■■□□□ 1.25
FN1-208ENST00000426059 DDX17Q92841 729 aaKnown RBP22.83■■□□□ 1.25
FN1-208ENST00000426059 XIRP1Q702N8 1843 aaKnown RBP22.83■■□□□ 1.25
FN1-208ENST00000426059 PRKAR2BP31323 418 aa22.82■■□□□ 1.24
FN1-208ENST00000426059 SLFN5Q08AF3 891 aa22.82■■□□□ 1.24
FN1-208ENST00000426059 MST1RQ04912 1400 aa22.82■■□□□ 1.24
FN1-208ENST00000426059 EIF4A2Q14240 407 aaKnown RBP22.82■■□□□ 1.24
FN1-208ENST00000426059 RSPH6AQ9H0K4 717 aa22.82■■□□□ 1.24
FN1-208ENST00000426059 RCAN3Q9UKA8 241 aa22.82■■□□□ 1.24
FN1-208ENST00000426059 MAPK8IP3Q9UPT6 1336 aa22.81■■□□□ 1.24
FN1-208ENST00000426059 LMOD2Q6P5Q4 547 aa22.81■■□□□ 1.24
FN1-208ENST00000426059 LRRC7Q96NW7 1537 aa22.81■■□□□ 1.24
FN1-208ENST00000426059 FCHSD2O94868 740 aa22.8■■□□□ 1.24
FN1-208ENST00000426059 TMPOP42166 694 aaKnown RBP22.79■■□□□ 1.24
FN1-208ENST00000426059 MSH6P52701 1360 aa22.78■■□□□ 1.24
FN1-208ENST00000426059 AMPHP49418 695 aa22.78■■□□□ 1.24
FN1-208ENST00000426059 KRT28Q7Z3Y7 464 aa22.78■■□□□ 1.24
FN1-208ENST00000426059 PHACTR3Q96KR7 559 aa22.78■■□□□ 1.24
FN1-208ENST00000426059 CADPS2Q86UW7 1296 aa22.78■■□□□ 1.24
FN1-208ENST00000426059 NGEFQ8N5V2 710 aa22.78■■□□□ 1.24
FN1-208ENST00000426059 NCOA3Q9Y6Q9 1424 aa22.77■■□□□ 1.24
FN1-208ENST00000426059 PHF23Q9BUL5 403 aaPredicted RBP22.77■■□□□ 1.24
FN1-208ENST00000426059 AEBP1Q8IUX7 1158 aa22.76■■□□□ 1.23
FN1-208ENST00000426059 TRMT2AQ8IZ69 625 aaKnown RBP22.76■■□□□ 1.23
FN1-208ENST00000426059 DCCP43146 1447 aa22.75■■□□□ 1.23
FN1-208ENST00000426059 RNF123Q5XPI4 1314 aa22.75■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms