RNA–Protein interactions for RNA: ENST00000425718.1

APOE-202, Transcript of apolipoprotein E, humanhuman

TSL 1 (best)

Gene APOE, Length 923 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-202ENST00000425718 ARHGEF10O15013 1369 aa33.2■■■□□ 2.9
APOE-202ENST00000425718 TNS3Q68CZ2 1445 aa33.19■■■□□ 2.9
APOE-202ENST00000425718 DDX17Q92841 729 aaKnown RBP33.19■■■□□ 2.9
APOE-202ENST00000425718 ALS2Q96Q42 1657 aa33.17■■■□□ 2.9
APOE-202ENST00000425718 HSPA1LP34931 641 aa33.17■■■□□ 2.9
APOE-202ENST00000425718 XPCQ01831 940 aaPredicted RBP33.16■■■□□ 2.9
APOE-202ENST00000425718 SPATA31A3Q5VYP0 1347 aa33.16■■■□□ 2.9
APOE-202ENST00000425718 PAK3O75914 559 aaPredicted RBP33.15■■■□□ 2.9
APOE-202ENST00000425718 SHPRHQ149N8 1683 aa33.15■■■□□ 2.9
APOE-202ENST00000425718 SSH2Q76I76 1423 aa33.15■■■□□ 2.9
APOE-202ENST00000425718 JCADQ9P266 1359 aa33.13■■■□□ 2.89
APOE-202ENST00000425718 TTC21BQ7Z4L5 1316 aa33.13■■■□□ 2.89
APOE-202ENST00000425718 PANK3Q9H999 370 aa33.13■■■□□ 2.89
APOE-202ENST00000425718 KIF20BQ96Q89 1820 aa33.1■■■□□ 2.89
APOE-202ENST00000425718 COL22A1Q8NFW1 1626 aaPredicted RBP33.1■■■□□ 2.89
APOE-202ENST00000425718 ABTB2Q8N961 1025 aa33.08■■■□□ 2.89
APOE-202ENST00000425718 NSD3Q9BZ95 1437 aa33.08■■■□□ 2.89
APOE-202ENST00000425718 LMOD2Q6P5Q4 547 aa33.07■■■□□ 2.88
APOE-202ENST00000425718 USP54Q70EL1 1684 aa33.07■■■□□ 2.88
APOE-202ENST00000425718 CGNL1Q0VF96 1302 aa33.06■■■□□ 2.88
APOE-202ENST00000425718 KNSTRNQ9Y448 316 aa33.06■■■□□ 2.88
APOE-202ENST00000425718 PIK3C2AO00443 1686 aa33.05■■■□□ 2.88
APOE-202ENST00000425718 NLRP13Q86W25 1043 aa33.05■■■□□ 2.88
APOE-202ENST00000425718 PNPLA6Q8IY17 1366 aa33.05■■■□□ 2.88
APOE-202ENST00000425718 MED1Q15648 1581 aaPredicted RBP33.04■■■□□ 2.88
APOE-202ENST00000425718 SUGP2Q8IX01 1082 aaKnown RBP eCLIP33.03■■■□□ 2.88
APOE-202ENST00000425718 NSD2O96028 1365 aa33.02■■■□□ 2.88
APOE-202ENST00000425718 CARD14Q9BXL6 1004 aa33.02■■■□□ 2.88
APOE-202ENST00000425718 SPATA31A6Q5VVP1 1343 aa33.02■■■□□ 2.88
APOE-202ENST00000425718 USP31Q70CQ4 1352 aa33■■■□□ 2.87
APOE-202ENST00000425718 ANKRD26Q9UPS8 1709 aa32.99■■■□□ 2.87
APOE-202ENST00000425718 NLRP6P59044 892 aa32.99■■■□□ 2.87
APOE-202ENST00000425718 COG3Q96JB2 828 aa32.96■■■□□ 2.87
APOE-202ENST00000425718 ABCA3Q99758 1704 aa32.95■■■□□ 2.87
APOE-202ENST00000425718 CRYBG1Q9Y4K1 1723 aa32.95■■■□□ 2.87
APOE-202ENST00000425718 ILDR1Q86SU0 546 aaPredicted RBP32.95■■■□□ 2.87
APOE-202ENST00000425718 NPC1L1Q9UHC9 1359 aa32.95■■■□□ 2.86
APOE-202ENST00000425718 DDX10Q13206 875 aaKnown RBP32.94■■■□□ 2.86
APOE-202ENST00000425718 NME9Q86XW9 330 aa32.94■■■□□ 2.86
APOE-202ENST00000425718 USP19O94966 1318 aa32.94■■■□□ 2.86
APOE-202ENST00000425718 PHRF1Q9P1Y6 1649 aaKnown RBP32.94■■■□□ 2.86
APOE-202ENST00000425718 FYB1O15117 783 aa32.93■■■□□ 2.86
APOE-202ENST00000425718 PER1O15534 1290 aaPredicted RBP32.93■■■□□ 2.86
APOE-202ENST00000425718 HAP1P54257 671 aaPredicted RBP32.93■■■□□ 2.86
APOE-202ENST00000425718 KCNH5Q8NCM2 988 aa32.93■■■□□ 2.86
APOE-202ENST00000425718 MARF1Q9Y4F3 1742 aaKnown RBP32.92■■■□□ 2.86
APOE-202ENST00000425718 OVOS2A0A0J9YW53 1432 aa32.92■■■□□ 2.86
APOE-202ENST00000425718 OVOS2Q6IE36 1432 aa32.92■■■□□ 2.86
APOE-202ENST00000425718 SLIT3O75094 1523 aa32.91■■■□□ 2.86
APOE-202ENST00000425718 NUTM2GQ5VZR2 741 aa32.89■■■□□ 2.86
APOE-202ENST00000425718 AMER1Q5JTC6 1135 aaPredicted RBP32.86■■■□□ 2.85
APOE-202ENST00000425718 GGNBP2Q9H3C7 697 aa32.86■■■□□ 2.85
APOE-202ENST00000425718 GCP02774 474 aa32.83■■■□□ 2.85
APOE-202ENST00000425718 NUTM2BA6NNL0 878 aaPredicted RBP32.8■■■□□ 2.84
APOE-202ENST00000425718 NUTM2EB1AL46 878 aaPredicted RBP32.8■■■□□ 2.84
APOE-202ENST00000425718 NUTM2AQ8IVF1 878 aaPredicted RBP32.8■■■□□ 2.84
APOE-202ENST00000425718 CABLES1Q8TDN4 633 aa32.8■■■□□ 2.84
APOE-202ENST00000425718 MORC1Q86VD1 984 aa32.79■■■□□ 2.84
APOE-202ENST00000425718 ZRANB1Q9UGI0 708 aa32.79■■■□□ 2.84
APOE-202ENST00000425718 CPDO75976 1380 aa32.78■■■□□ 2.84
APOE-202ENST00000425718 NFAT5O94916 1531 aa32.77■■■□□ 2.84
APOE-202ENST00000425718 LTN1O94822 1766 aa32.77■■■□□ 2.84
APOE-202ENST00000425718 MAP2P11137 1827 aaKnown RBP32.77■■■□□ 2.84
APOE-202ENST00000425718 MEX3CQ5U5Q3 659 aaKnown RBP32.76■■■□□ 2.83
APOE-202ENST00000425718 ABCC6O95255 1503 aa32.76■■■□□ 2.83
APOE-202ENST00000425718 PLEKHG5O94827 1062 aa32.75■■■□□ 2.83
APOE-202ENST00000425718 COL14A1Q05707 1796 aaKnown RBP32.75■■■□□ 2.83
APOE-202ENST00000425718 AATKQ6ZMQ8 1374 aa32.74■■■□□ 2.83
APOE-202ENST00000425718 CC2D1BQ5T0F9 858 aaKnown RBP32.74■■■□□ 2.83
APOE-202ENST00000425718 LRP6O75581 1613 aa32.72■■■□□ 2.83
APOE-202ENST00000425718 KIF24Q5T7B8 1368 aa32.71■■■□□ 2.83
APOE-202ENST00000425718 PRDM11Q9NQV5 511 aa32.71■■■□□ 2.83
APOE-202ENST00000425718 ADAMTS2O95450 1211 aa32.7■■■□□ 2.83
APOE-202ENST00000425718 NWD2Q9ULI1 1742 aa32.7■■■□□ 2.83
APOE-202ENST00000425718 KIAA0232Q92628 1395 aa32.7■■■□□ 2.82
APOE-202ENST00000425718 ZC3H6P61129 1189 aaKnown RBP32.69■■■□□ 2.82
APOE-202ENST00000425718 ARHGEF25Q86VW2 580 aa32.69■■■□□ 2.82
APOE-202ENST00000425718 SOX12O15370 315 aa32.68■■■□□ 2.82
APOE-202ENST00000425718 RALBP1Q15311 655 aa32.67■■■□□ 2.82
APOE-202ENST00000425718 RTL1A6NKG5 1358 aa32.67■■■□□ 2.82
APOE-202ENST00000425718 PLCH1Q4KWH8 1693 aa32.65■■■□□ 2.82
APOE-202ENST00000425718 NGLY1Q96IV0 654 aa32.63■■■□□ 2.81
APOE-202ENST00000425718 PARD3Q8TEW0 1356 aa32.62■■■□□ 2.81
APOE-202ENST00000425718 C8orf37Q96NL8 207 aa32.62■■■□□ 2.81
APOE-202ENST00000425718 COL18A1P39060 1754 aa32.62■■■□□ 2.81
APOE-202ENST00000425718 AMPHP49418 695 aa32.61■■■□□ 2.81
APOE-202ENST00000425718 LMO7Q8WWI1 1683 aa32.61■■■□□ 2.81
APOE-202ENST00000425718 BLMP54132 1417 aaPredicted RBP32.6■■■□□ 2.81
APOE-202ENST00000425718 TNKS1BP1Q9C0C2 1729 aaKnown RBP32.6■■■□□ 2.81
APOE-202ENST00000425718 MAP3K19Q56UN5 1328 aa32.6■■■□□ 2.81
APOE-202ENST00000425718 ZBTB7CA1YPR0 619 aa32.6■■■□□ 2.81
APOE-202ENST00000425718 FAM83GA6ND36 823 aa32.6■■■□□ 2.81
APOE-202ENST00000425718 TNNT2P45379 298 aaPredicted RBP32.6■■■□□ 2.81
APOE-202ENST00000425718 FLT4P35916 1363 aa32.59■■■□□ 2.81
APOE-202ENST00000425718 SMG6Q86US8 1419 aaKnown RBP32.59■■■□□ 2.81
APOE-202ENST00000425718 SLIT2O94813 1529 aa32.58■■■□□ 2.81
APOE-202ENST00000425718 IP6K1Q92551 441 aa32.58■■■□□ 2.81
APOE-202ENST00000425718 RGPD5Q99666 1765 aa32.58■■■□□ 2.81
APOE-202ENST00000425718 ANP32CO43423 234 aa32.57■■■□□ 2.8
APOE-202ENST00000425718 CNGB1Q14028 1251 aaPredicted RBP32.57■■■□□ 2.8
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms