RNA–Protein interactions for RNA: ENST00000425712.1

LINC01006-203, Transcript of long intergenic non-protein coding RNA 1006, humanhuman

TSL 2 BASIC

Gene LINC01006, Length 661 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006-203ENST00000425712 USP54Q70EL1 1684 aa12.94□□□□□ -0.34
LINC01006-203ENST00000425712 PER1O15534 1290 aaPredicted RBP12.94□□□□□ -0.34
LINC01006-203ENST00000425712 PSME1Q06323 249 aa12.94□□□□□ -0.34
LINC01006-203ENST00000425712 SBNO1A3KN83 1393 aa12.94□□□□□ -0.34
LINC01006-203ENST00000425712 TTC21BQ7Z4L5 1316 aa12.93□□□□□ -0.34
LINC01006-203ENST00000425712 FOXO3O43524 673 aa12.93□□□□□ -0.34
LINC01006-203ENST00000425712 CARD14Q9BXL6 1004 aa12.93□□□□□ -0.34
LINC01006-203ENST00000425712 TNS3Q68CZ2 1445 aa12.93□□□□□ -0.34
LINC01006-203ENST00000425712 PIK3C2AO00443 1686 aa12.93□□□□□ -0.34
LINC01006-203ENST00000425712 DIEXFQ68CQ4 756 aaKnown RBP12.92□□□□□ -0.34
LINC01006-203ENST00000425712 KRT28Q7Z3Y7 464 aa12.92□□□□□ -0.34
LINC01006-203ENST00000425712 ALS2Q96Q42 1657 aa12.92□□□□□ -0.34
LINC01006-203ENST00000425712 SOS2Q07890 1332 aaPredicted RBP12.91□□□□□ -0.34
LINC01006-203ENST00000425712 PHLPP1O60346 1717 aa12.91□□□□□ -0.34
LINC01006-203ENST00000425712 AMER1Q5JTC6 1135 aaPredicted RBP12.91□□□□□ -0.34
LINC01006-203ENST00000425712 ARHGEF10O15013 1369 aa12.91□□□□□ -0.34
LINC01006-203ENST00000425712 SCAF1Q9H7N4 1312 aaKnown RBP12.9□□□□□ -0.34
LINC01006-203ENST00000425712 OVOS2A0A0J9YW53 1432 aa12.9□□□□□ -0.34
LINC01006-203ENST00000425712 OVOS2Q6IE36 1432 aa12.9□□□□□ -0.34
LINC01006-203ENST00000425712 PIP4K2BP78356 416 aa12.9□□□□□ -0.34
LINC01006-203ENST00000425712 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.9□□□□□ -0.34
LINC01006-203ENST00000425712 COL16A1Q07092 1604 aaPredicted RBP12.9□□□□□ -0.34
LINC01006-203ENST00000425712 USP31Q70CQ4 1352 aa12.9□□□□□ -0.34
LINC01006-203ENST00000425712 MED1Q15648 1581 aaPredicted RBP12.9□□□□□ -0.35
LINC01006-203ENST00000425712 PAK3O75914 559 aaPredicted RBP12.89□□□□□ -0.35
LINC01006-203ENST00000425712 ANP32CO43423 234 aa12.88□□□□□ -0.35
LINC01006-203ENST00000425712 XPCQ01831 940 aaPredicted RBP12.88□□□□□ -0.35
LINC01006-203ENST00000425712 PARD3Q8TEW0 1356 aa12.88□□□□□ -0.35
LINC01006-203ENST00000425712 SPATA31A3Q5VYP0 1347 aa12.88□□□□□ -0.35
LINC01006-203ENST00000425712 FYB1O15117 783 aa12.87□□□□□ -0.35
LINC01006-203ENST00000425712 RALBP1Q15311 655 aa12.87□□□□□ -0.35
LINC01006-203ENST00000425712 NME9Q86XW9 330 aa12.87□□□□□ -0.35
LINC01006-203ENST00000425712 ABTB2Q8N961 1025 aa12.87□□□□□ -0.35
LINC01006-203ENST00000425712 DDX17Q92841 729 aaKnown RBP12.87□□□□□ -0.35
LINC01006-203ENST00000425712 COG3Q96JB2 828 aa12.87□□□□□ -0.35
LINC01006-203ENST00000425712 SLIT3O75094 1523 aa12.87□□□□□ -0.35
LINC01006-203ENST00000425712 MARF1Q9Y4F3 1742 aaKnown RBP12.86□□□□□ -0.35
LINC01006-203ENST00000425712 CC2D1BQ5T0F9 858 aaKnown RBP12.86□□□□□ -0.35
LINC01006-203ENST00000425712 GGNBP2Q9H3C7 697 aa12.86□□□□□ -0.35
LINC01006-203ENST00000425712 COL22A1Q8NFW1 1626 aaPredicted RBP12.85□□□□□ -0.35
LINC01006-203ENST00000425712 PHRF1Q9P1Y6 1649 aaKnown RBP12.85□□□□□ -0.35
LINC01006-203ENST00000425712 MORC1Q86VD1 984 aa12.85□□□□□ -0.35
LINC01006-203ENST00000425712 NLRP13Q86W25 1043 aa12.85□□□□□ -0.35
LINC01006-203ENST00000425712 LRRC59Q96AG4 307 aaKnown RBP12.85□□□□□ -0.35
LINC01006-203ENST00000425712 PRKRIP1Q9H875 184 aaPredicted RBP12.85□□□□□ -0.35
LINC01006-203ENST00000425712 USP19O94966 1318 aa12.85□□□□□ -0.35
LINC01006-203ENST00000425712 CRYBG1Q9Y4K1 1723 aa12.85□□□□□ -0.35
LINC01006-203ENST00000425712 NLRP6P59044 892 aa12.84□□□□□ -0.35
LINC01006-203ENST00000425712 LMOD2Q6P5Q4 547 aa12.84□□□□□ -0.35
LINC01006-203ENST00000425712 SHPRHQ149N8 1683 aa12.83□□□□□ -0.35
LINC01006-203ENST00000425712 ABCA3Q99758 1704 aa12.83□□□□□ -0.36
LINC01006-203ENST00000425712 MYBBP1AQ9BQG0 1328 aaKnown RBP12.83□□□□□ -0.36
LINC01006-203ENST00000425712 AATKQ6ZMQ8 1374 aa12.82□□□□□ -0.36
LINC01006-203ENST00000425712 KCNH5Q8NCM2 988 aa12.82□□□□□ -0.36
LINC01006-203ENST00000425712 NFAT5O94916 1531 aa12.82□□□□□ -0.36
LINC01006-203ENST00000425712 PNPLA6Q8IY17 1366 aa12.81□□□□□ -0.36
LINC01006-203ENST00000425712 SMG6Q86US8 1419 aaKnown RBP12.81□□□□□ -0.36
LINC01006-203ENST00000425712 CNGB1Q14028 1251 aaPredicted RBP12.81□□□□□ -0.36
LINC01006-203ENST00000425712 JCADQ9P266 1359 aa12.81□□□□□ -0.36
LINC01006-203ENST00000425712 NUTM2GQ5VZR2 741 aa12.8□□□□□ -0.36
LINC01006-203ENST00000425712 ZRANB1Q9UGI0 708 aa12.8□□□□□ -0.36
LINC01006-203ENST00000425712 ABCC6O95255 1503 aa12.79□□□□□ -0.36
LINC01006-203ENST00000425712 RTL1A6NKG5 1358 aa12.79□□□□□ -0.36
LINC01006-203ENST00000425712 KIF24Q5T7B8 1368 aa12.79□□□□□ -0.36
LINC01006-203ENST00000425712 CDK12Q9NYV4 1490 aaPredicted RBP12.78□□□□□ -0.36
LINC01006-203ENST00000425712 FBXO41Q8TF61 875 aa12.78□□□□□ -0.36
LINC01006-203ENST00000425712 LTN1O94822 1766 aa12.77□□□□□ -0.36
LINC01006-203ENST00000425712 GCP02774 474 aa12.77□□□□□ -0.37
LINC01006-203ENST00000425712 PPP2R1AP30153 589 aa12.77□□□□□ -0.37
LINC01006-203ENST00000425712 TNNT2P45379 298 aaPredicted RBP12.77□□□□□ -0.37
LINC01006-203ENST00000425712 HAP1P54257 671 aaPredicted RBP12.77□□□□□ -0.37
LINC01006-203ENST00000425712 CPDO75976 1380 aa12.77□□□□□ -0.37
LINC01006-203ENST00000425712 HSPA1LP34931 641 aa12.76□□□□□ -0.37
LINC01006-203ENST00000425712 CCER2I3L3R5 266 aa12.75□□□□□ -0.37
LINC01006-203ENST00000425712 SOX12O15370 315 aa12.75□□□□□ -0.37
LINC01006-203ENST00000425712 MAP2P11137 1827 aaKnown RBP12.75□□□□□ -0.37
LINC01006-203ENST00000425712 FLT4P35916 1363 aa12.75□□□□□ -0.37
LINC01006-203ENST00000425712 SPATA31A6Q5VVP1 1343 aa12.75□□□□□ -0.37
LINC01006-203ENST00000425712 MAP3K19Q56UN5 1328 aa12.74□□□□□ -0.37
LINC01006-203ENST00000425712 CFAP53Q96M91 514 aa12.74□□□□□ -0.37
LINC01006-203ENST00000425712 PEAK1Q9H792 1746 aa12.74□□□□□ -0.37
LINC01006-203ENST00000425712 BLMP54132 1417 aaPredicted RBP12.73□□□□□ -0.37
LINC01006-203ENST00000425712 RRS1Q15050 365 aaKnown RBP12.73□□□□□ -0.37
LINC01006-203ENST00000425712 ARHGEF25Q86VW2 580 aa12.73□□□□□ -0.37
LINC01006-203ENST00000425712 MIER1Q8N108 512 aa12.73□□□□□ -0.37
LINC01006-203ENST00000425712 CABLES1Q8TDN4 633 aa12.73□□□□□ -0.37
LINC01006-203ENST00000425712 POLKQ9UBT6 870 aa12.73□□□□□ -0.37
LINC01006-203ENST00000425712 EMILIN1Q9Y6C2 1016 aa12.73□□□□□ -0.37
LINC01006-203ENST00000425712 COL14A1Q05707 1796 aaKnown RBP12.73□□□□□ -0.37
LINC01006-203ENST00000425712 INSRP06213 1382 aa12.72□□□□□ -0.37
LINC01006-203ENST00000425712 KIAA0232Q92628 1395 aa12.72□□□□□ -0.37
LINC01006-203ENST00000425712 PLEKHG5O94827 1062 aa12.72□□□□□ -0.37
LINC01006-203ENST00000425712 AMPHP49418 695 aa12.72□□□□□ -0.37
LINC01006-203ENST00000425712 MTHFSP49914 203 aa12.72□□□□□ -0.37
LINC01006-203ENST00000425712 COL3A1P02461 1466 aaPredicted RBP12.72□□□□□ -0.37
LINC01006-203ENST00000425712 LMO7Q8WWI1 1683 aa12.71□□□□□ -0.37
LINC01006-203ENST00000425712 PRDM11Q9NQV5 511 aa12.71□□□□□ -0.37
LINC01006-203ENST00000425712 FAM208AQ9UK61 1670 aaKnown RBP12.7□□□□□ -0.38
LINC01006-203ENST00000425712 PPM1GO15355 546 aaPredicted RBP12.7□□□□□ -0.38
LINC01006-203ENST00000425712 ZC3H6P61129 1189 aaKnown RBP12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms