RNA–Protein interactions for RNA: ENST00000425562.6

LRCH3-203, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LRCH3, Length 2,970 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-203ENST00000425562 NOB1Q9ULX3 412 aaKnown RBP16.9■□□□□ 0.3
LRCH3-203ENST00000425562 SSFA2P28290 1259 aa16.89■□□□□ 0.3
LRCH3-203ENST00000425562 KIAA1211Q6ZU35 1233 aa16.89■□□□□ 0.3
LRCH3-203ENST00000425562 SLC24A1O60721 1099 aa16.89■□□□□ 0.29
LRCH3-203ENST00000425562 TMEM57Q8N5G2 664 aa16.89■□□□□ 0.29
LRCH3-203ENST00000425562 QRICH2Q9H0J4 1663 aa16.89■□□□□ 0.29
LRCH3-203ENST00000425562 CD109Q6YHK3 1445 aa16.88■□□□□ 0.29
LRCH3-203ENST00000425562 ZNF518AQ6AHZ1 1483 aa16.88■□□□□ 0.29
LRCH3-203ENST00000425562 IDI1Q13907 227 aa16.88■□□□□ 0.29
LRCH3-203ENST00000425562 CHAMP1Q96JM3 812 aa16.88■□□□□ 0.29
LRCH3-203ENST00000425562 IFT172Q9UG01 1749 aa16.87■□□□□ 0.29
LRCH3-203ENST00000425562 EVC2Q86UK5 1308 aa16.87■□□□□ 0.29
LRCH3-203ENST00000425562 ELL2O00472 640 aaPredicted RBP16.87■□□□□ 0.29
LRCH3-203ENST00000425562 SHPRHQ149N8 1683 aa16.86■□□□□ 0.29
LRCH3-203ENST00000425562 ADGRB3O60242 1522 aa16.86■□□□□ 0.29
LRCH3-203ENST00000425562 ANKRD45Q5TZF3 282 aa16.86■□□□□ 0.29
LRCH3-203ENST00000425562 FOXD4L5Q5VV16 416 aaPredicted RBP16.86■□□□□ 0.29
LRCH3-203ENST00000425562 FOXD4L4Q8WXT5 416 aaPredicted RBP16.86■□□□□ 0.29
LRCH3-203ENST00000425562 VIRMAQ69YN4 1812 aaKnown RBP16.85■□□□□ 0.29
LRCH3-203ENST00000425562 OSCARQ8IYS5 282 aa16.85■□□□□ 0.29
LRCH3-203ENST00000425562 FAM13BQ9NYF5 915 aa16.85■□□□□ 0.29
LRCH3-203ENST00000425562 DDX49Q9Y6V7 483 aaKnown RBP16.85■□□□□ 0.29
LRCH3-203ENST00000425562 NRXN1Q9ULB1 1477 aa16.85■□□□□ 0.29
LRCH3-203ENST00000425562 TPRNQ4KMQ1 711 aa16.85■□□□□ 0.29
LRCH3-203ENST00000425562 NASPP49321 788 aaPredicted RBP16.84■□□□□ 0.29
LRCH3-203ENST00000425562 GBP4Q96PP9 640 aa16.84■□□□□ 0.29
LRCH3-203ENST00000425562 SBNO2Q9Y2G9 1366 aa16.84■□□□□ 0.29
LRCH3-203ENST00000425562 ADGRB1O14514 1584 aa16.83■□□□□ 0.28
LRCH3-203ENST00000425562 VGFO15240 615 aaPredicted RBP16.83■□□□□ 0.28
LRCH3-203ENST00000425562 MPNDQ8N594 471 aa16.83■□□□□ 0.28
LRCH3-203ENST00000425562 GAS2L2Q8NHY3 880 aa16.83■□□□□ 0.28
LRCH3-203ENST00000425562 NINLQ9Y2I6 1382 aa16.83■□□□□ 0.28
LRCH3-203ENST00000425562 FBXO31Q5XUX0 539 aaPredicted RBP16.83■□□□□ 0.28
LRCH3-203ENST00000425562 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.83■□□□□ 0.28
LRCH3-203ENST00000425562 PRAM1Q96QH2 718 aa16.83■□□□□ 0.28
LRCH3-203ENST00000425562 FRMPD1Q5SYB0 1578 aa16.82■□□□□ 0.28
LRCH3-203ENST00000425562 APBB1O00213 710 aa16.82■□□□□ 0.28
LRCH3-203ENST00000425562 R3HCC1Q9Y3T6 440 aaKnown RBP16.82■□□□□ 0.28
LRCH3-203ENST00000425562 WDR63Q8IWG1 891 aa16.82■□□□□ 0.28
LRCH3-203ENST00000425562 PPLO60437 1756 aa16.81■□□□□ 0.28
LRCH3-203ENST00000425562 A0A1W2PP64 1363 aa16.81■□□□□ 0.28
LRCH3-203ENST00000425562 ATF7IPQ6VMQ6 1270 aa16.81■□□□□ 0.28
LRCH3-203ENST00000425562 MCTP1Q6DN14 999 aa16.81■□□□□ 0.28
LRCH3-203ENST00000425562 POGZQ7Z3K3 1410 aa16.81■□□□□ 0.28
LRCH3-203ENST00000425562 CAVIN1Q6NZI2 390 aaKnown RBP16.8■□□□□ 0.28
LRCH3-203ENST00000425562 TULP4Q9NRJ4 1543 aa16.8■□□□□ 0.28
LRCH3-203ENST00000425562 XPCQ01831 940 aaPredicted RBP16.8■□□□□ 0.28
LRCH3-203ENST00000425562 PKP1Q13835 747 aa16.8■□□□□ 0.28
LRCH3-203ENST00000425562 MYO3AQ8NEV4 1616 aa16.8■□□□□ 0.28
LRCH3-203ENST00000425562 PHF23Q9BUL5 403 aaPredicted RBP16.8■□□□□ 0.28
LRCH3-203ENST00000425562 DDX19BQ9UMR2 479 aa16.8■□□□□ 0.28
LRCH3-203ENST00000425562 IQSEC2Q5JU85 1478 aa16.79■□□□□ 0.28
LRCH3-203ENST00000425562 NGEFQ8N5V2 710 aa16.79■□□□□ 0.28
LRCH3-203ENST00000425562 THUMPD2Q9BTF0 503 aaKnown RBP16.79■□□□□ 0.28
LRCH3-203ENST00000425562 GLI2P10070 1586 aa16.79■□□□□ 0.28
LRCH3-203ENST00000425562 MSNP26038 577 aaKnown RBP16.79■□□□□ 0.28
LRCH3-203ENST00000425562 RAB3GAP1Q15042 981 aa16.79■□□□□ 0.28
LRCH3-203ENST00000425562 ANKRD36BQ8N2N9 1353 aa16.79■□□□□ 0.28
LRCH3-203ENST00000425562 TMPOP42166 694 aaKnown RBP16.78■□□□□ 0.28
LRCH3-203ENST00000425562 ANP32BQ92688 251 aaKnown RBP16.78■□□□□ 0.28
LRCH3-203ENST00000425562 SIGLEC1Q9BZZ2 1709 aa16.78■□□□□ 0.28
LRCH3-203ENST00000425562 RIPK4P57078 832 aa16.78■□□□□ 0.28
LRCH3-203ENST00000425562 CHD1LQ86WJ1 897 aa16.78■□□□□ 0.28
LRCH3-203ENST00000425562 KIF2CQ99661 725 aa16.78■□□□□ 0.28
LRCH3-203ENST00000425562 RBM27Q9P2N5 1060 aaKnown RBP16.78■□□□□ 0.28
LRCH3-203ENST00000425562 STAG3Q9UJ98 1225 aa16.78■□□□□ 0.28
LRCH3-203ENST00000425562 FYB1O15117 783 aa16.77■□□□□ 0.28
LRCH3-203ENST00000425562 FOXD4L6Q3SYB3 417 aaPredicted RBP16.77■□□□□ 0.28
LRCH3-203ENST00000425562 FOXD4L3Q6VB84 417 aaPredicted RBP16.77■□□□□ 0.28
LRCH3-203ENST00000425562 ABCC3O15438 1527 aa16.77■□□□□ 0.28
LRCH3-203ENST00000425562 TRIM35Q9UPQ4 493 aa16.77■□□□□ 0.28
LRCH3-203ENST00000425562 AK9Q5TCS8 1911 aa16.77■□□□□ 0.27
LRCH3-203ENST00000425562 SETBP1Q9Y6X0 1596 aa16.77■□□□□ 0.27
LRCH3-203ENST00000425562 CABP1Q9NZU7 370 aa16.77■□□□□ 0.27
LRCH3-203ENST00000425562 ZC3H13Q5T200 1668 aaKnown RBP16.76■□□□□ 0.27
LRCH3-203ENST00000425562 TBC1D9Q6ZT07 1266 aa16.76■□□□□ 0.27
LRCH3-203ENST00000425562 SMC5Q8IY18 1101 aa16.76■□□□□ 0.27
LRCH3-203ENST00000425562 RPGRIP1LQ68CZ1 1315 aa16.76■□□□□ 0.27
LRCH3-203ENST00000425562 LMTK2Q8IWU2 1503 aa16.76■□□□□ 0.27
LRCH3-203ENST00000425562 HMOX1P09601 288 aa16.76■□□□□ 0.27
LRCH3-203ENST00000425562 DDIT3P35638 169 aa16.76■□□□□ 0.27
LRCH3-203ENST00000425562 HDAC1Q13547 482 aaPredicted RBP16.75■□□□□ 0.27
LRCH3-203ENST00000425562 WAPLQ7Z5K2 1190 aa16.75■□□□□ 0.27
LRCH3-203ENST00000425562 ZBTB40Q9NUA8 1239 aa16.75■□□□□ 0.27
LRCH3-203ENST00000425562 NEURL4Q96JN8 1562 aa16.75■□□□□ 0.27
LRCH3-203ENST00000425562 CAMSAP1Q5T5Y3 1602 aa16.75■□□□□ 0.27
LRCH3-203ENST00000425562 K7ELQ4 463 aaPredicted RBP16.75■□□□□ 0.27
LRCH3-203ENST00000425562 MLECQ14165 292 aa16.75■□□□□ 0.27
LRCH3-203ENST00000425562 RNF214Q8ND24 703 aa16.75■□□□□ 0.27
LRCH3-203ENST00000425562 RBM25P49756 843 aaKnown RBP16.74■□□□□ 0.27
LRCH3-203ENST00000425562 NUCB1Q02818 461 aa16.74■□□□□ 0.27
LRCH3-203ENST00000425562 ATAD2Q6PL18 1390 aa16.74■□□□□ 0.27
LRCH3-203ENST00000425562 BAG4O95429 457 aaKnown RBP16.74■□□□□ 0.27
LRCH3-203ENST00000425562 PLEKHF1Q96S99 279 aa16.74■□□□□ 0.27
LRCH3-203ENST00000425562 YEATS2Q9ULM3 1422 aa16.73■□□□□ 0.27
LRCH3-203ENST00000425562 GOLGA6L22H0YM25 854 aa16.73■□□□□ 0.27
LRCH3-203ENST00000425562 ZSCAN30Q86W11 494 aa16.73■□□□□ 0.27
LRCH3-203ENST00000425562 CDK19Q9BWU1 502 aa16.73■□□□□ 0.27
LRCH3-203ENST00000425562 HECW2Q9P2P5 1572 aa16.73■□□□□ 0.27
LRCH3-203ENST00000425562 PRDM10Q9NQV6 1147 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 105 ms