RNA–Protein interactions for RNA: ENST00000425393.1

RAB3GAP1-202, Transcript of RAB3 GTPase activating protein catalytic subunit 1, humanhuman

TSL 2 BASIC

Gene RAB3GAP1, Length 1,139 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3GAP1-202ENST00000425393 WFS1O76024 890 aa11.76□□□□□ -0.53
RAB3GAP1-202ENST00000425393 F12P00748 615 aaPredicted RBP11.76□□□□□ -0.53
RAB3GAP1-202ENST00000425393 TUSC1Q2TAM9 212 aa11.76□□□□□ -0.53
RAB3GAP1-202ENST00000425393 BCANQ96GW7 911 aa11.76□□□□□ -0.53
RAB3GAP1-202ENST00000425393 SENP2Q9HC62 589 aa11.76□□□□□ -0.53
RAB3GAP1-202ENST00000425393 CTHP32929 405 aa11.75□□□□□ -0.53
RAB3GAP1-202ENST00000425393 MAP10Q9P2G4 905 aa11.75□□□□□ -0.53
RAB3GAP1-202ENST00000425393 TLL2Q9Y6L7 1015 aa11.74□□□□□ -0.53
RAB3GAP1-202ENST00000425393 PER1O15534 1290 aaPredicted RBP11.73□□□□□ -0.53
RAB3GAP1-202ENST00000425393 LILRB3O75022 631 aa11.73□□□□□ -0.53
RAB3GAP1-202ENST00000425393 LCE2AQ5TA79 106 aaPredicted RBP11.73□□□□□ -0.53
RAB3GAP1-202ENST00000425393 WASF2Q9Y6W5 498 aa11.73□□□□□ -0.53
RAB3GAP1-202ENST00000425393 NUTM2BA6NNL0 878 aaPredicted RBP11.72□□□□□ -0.53
RAB3GAP1-202ENST00000425393 NUTM2EB1AL46 878 aaPredicted RBP11.72□□□□□ -0.53
RAB3GAP1-202ENST00000425393 CLK2P49760 499 aaKnown RBP11.72□□□□□ -0.53
RAB3GAP1-202ENST00000425393 NUTM2DQ5VT03 806 aaPredicted RBP11.72□□□□□ -0.53
RAB3GAP1-202ENST00000425393 NUTM2AQ8IVF1 878 aaPredicted RBP11.72□□□□□ -0.53
RAB3GAP1-202ENST00000425393 VARSP26640 1264 aaKnown RBP11.71□□□□□ -0.53
RAB3GAP1-202ENST00000425393 TSC1Q92574 1164 aa11.71□□□□□ -0.53
RAB3GAP1-202ENST00000425393 KIFC2Q96AC6 838 aa11.7□□□□□ -0.54
RAB3GAP1-202ENST00000425393 TRIM47Q96LD4 638 aa11.69□□□□□ -0.54
RAB3GAP1-202ENST00000425393 RTL5Q5HYW3 569 aaPredicted RBP11.68□□□□□ -0.54
RAB3GAP1-202ENST00000425393 MPNDQ8N594 471 aa11.68□□□□□ -0.54
RAB3GAP1-202ENST00000425393 RSPH6AQ9H0K4 717 aa11.68□□□□□ -0.54
RAB3GAP1-202ENST00000425393 SNRPBP14678 240 aaKnown RBP11.67□□□□□ -0.54
RAB3GAP1-202ENST00000425393 FOXJ1Q92949 421 aa11.67□□□□□ -0.54
RAB3GAP1-202ENST00000425393 INSM1Q01101 510 aaPredicted RBP11.66□□□□□ -0.54
RAB3GAP1-202ENST00000425393 HELBQ8NG08 1087 aaPredicted RBP11.66□□□□□ -0.54
RAB3GAP1-202ENST00000425393 GPBP1L1Q9HC44 474 aaPredicted RBP11.66□□□□□ -0.54
RAB3GAP1-202ENST00000425393 POLR3EQ9NVU0 708 aa11.66□□□□□ -0.54
RAB3GAP1-202ENST00000425393 PLEKHG3A1L390 1219 aa11.65□□□□□ -0.54
RAB3GAP1-202ENST00000425393 BMP1P13497 986 aa11.65□□□□□ -0.54
RAB3GAP1-202ENST00000425393 NFX1Q12986 1120 aaKnown RBP11.65□□□□□ -0.54
RAB3GAP1-202ENST00000425393 CAPN5O15484 640 aaPredicted RBP11.64□□□□□ -0.55
RAB3GAP1-202ENST00000425393 FAM174AQ8TBP5 190 aa11.64□□□□□ -0.55
RAB3GAP1-202ENST00000425393 KDM4CQ9H3R0 1056 aa11.64□□□□□ -0.55
RAB3GAP1-202ENST00000425393 NNTQ13423 1086 aa11.63□□□□□ -0.55
RAB3GAP1-202ENST00000425393 C4orf48Q5BLP8 95 aa11.63□□□□□ -0.55
RAB3GAP1-202ENST00000425393 STK17AQ9UEE5 414 aa11.63□□□□□ -0.55
RAB3GAP1-202ENST00000425393 WIPF1O43516 503 aa11.62□□□□□ -0.55
RAB3GAP1-202ENST00000425393 TRIM46Q7Z4K8 759 aa11.62□□□□□ -0.55
RAB3GAP1-202ENST00000425393 TERTO14746 1132 aaKnown RBP11.61□□□□□ -0.55
RAB3GAP1-202ENST00000425393 ADH1CP00326 375 aa11.6□□□□□ -0.55
RAB3GAP1-202ENST00000425393 BPHLQ86WA6 291 aaPredicted RBP11.6□□□□□ -0.55
RAB3GAP1-202ENST00000425393 CDK15Q96Q40 435 aa11.6□□□□□ -0.55
RAB3GAP1-202ENST00000425393 FAM117AQ9C073 453 aa11.6□□□□□ -0.55
RAB3GAP1-202ENST00000425393 AGERQ15109 404 aa11.59□□□□□ -0.55
RAB3GAP1-202ENST00000425393 SH3D19Q5HYK7 790 aa11.59□□□□□ -0.55
RAB3GAP1-202ENST00000425393 ARMC2Q8NEN0 867 aa11.59□□□□□ -0.55
RAB3GAP1-202ENST00000425393 SKIV2LQ15477 1246 aaKnown RBP11.58□□□□□ -0.56
RAB3GAP1-202ENST00000425393 DDRGK1Q96HY6 314 aa11.58□□□□□ -0.56
RAB3GAP1-202ENST00000425393 TIMP2P16035 220 aa11.57□□□□□ -0.56
RAB3GAP1-202ENST00000425393 ARID5BQ14865 1188 aa11.57□□□□□ -0.56
RAB3GAP1-202ENST00000425393 NBPF14Q5TI25 921 aa11.57□□□□□ -0.56
RAB3GAP1-202ENST00000425393 FBXO31Q5XUX0 539 aaPredicted RBP11.57□□□□□ -0.56
RAB3GAP1-202ENST00000425393 SH3RF1Q7Z6J0 888 aa11.57□□□□□ -0.56
RAB3GAP1-202ENST00000425393 SLC16A10Q8TF71 515 aa11.57□□□□□ -0.56
RAB3GAP1-202ENST00000425393 CTDSPL2Q05D32 466 aa11.56□□□□□ -0.56
RAB3GAP1-202ENST00000425393 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.56□□□□□ -0.56
RAB3GAP1-202ENST00000425393 C1QTNF2Q9BXJ5 285 aa11.56□□□□□ -0.56
RAB3GAP1-202ENST00000425393 KLF16Q9BXK1 252 aaPredicted RBP11.56□□□□□ -0.56
RAB3GAP1-202ENST00000425393 WDR4P57081 412 aaKnown RBP11.55□□□□□ -0.56
RAB3GAP1-202ENST00000425393 SH3BP5LQ7L8J4 393 aa11.55□□□□□ -0.56
RAB3GAP1-202ENST00000425393 PROCA1Q8NCQ7 364 aaPredicted RBP11.54□□□□□ -0.56
RAB3GAP1-202ENST00000425393 NR3C2P08235 984 aa11.53□□□□□ -0.56
RAB3GAP1-202ENST00000425393 GRM5P41594 1212 aa11.52□□□□□ -0.57
RAB3GAP1-202ENST00000425393 NR5A1Q13285 461 aa11.52□□□□□ -0.57
RAB3GAP1-202ENST00000425393 LCE2CQ5TA81 110 aa11.52□□□□□ -0.57
RAB3GAP1-202ENST00000425393 MRPL14Q6P1L8 145 aaKnown RBP11.52□□□□□ -0.57
RAB3GAP1-202ENST00000425393 ZFP42Q96MM3 310 aa11.52□□□□□ -0.57
RAB3GAP1-202ENST00000425393 PPP2R2DQ66LE6 453 aa11.51□□□□□ -0.57
RAB3GAP1-202ENST00000425393 LRRN4Q8WUT4 740 aa11.51□□□□□ -0.57
RAB3GAP1-202ENST00000425393 GPKOWQ92917 476 aaPredicted RBP eCLIP11.51□□□□□ -0.572e-9■■■■□ 22.7
RAB3GAP1-202ENST00000425393 MAGEB6P1A0A0J9YX57 407 aa11.5□□□□□ -0.57
RAB3GAP1-202ENST00000425393 ZIC2O95409 532 aaPredicted RBP11.5□□□□□ -0.57
RAB3GAP1-202ENST00000425393 TRMT44Q8IYL2 757 aaKnown RBP11.5□□□□□ -0.57
RAB3GAP1-202ENST00000425393 MAP4K5Q9Y4K4 846 aa11.5□□□□□ -0.57
RAB3GAP1-202ENST00000425393 FAM181BA6NEQ2 426 aa11.49□□□□□ -0.57
RAB3GAP1-202ENST00000425393 ITPKCQ96DU7 683 aa11.49□□□□□ -0.57
RAB3GAP1-202ENST00000425393 ZFAND3Q9H8U3 227 aa11.49□□□□□ -0.57
RAB3GAP1-202ENST00000425393 NXF1Q9UBU9 619 aaKnown RBP11.49□□□□□ -0.57
RAB3GAP1-202ENST00000425393 FSHRP23945 695 aa11.48□□□□□ -0.57
RAB3GAP1-202ENST00000425393 NPAS3Q8IXF0 933 aa11.48□□□□□ -0.57
RAB3GAP1-202ENST00000425393 CARD14Q9BXL6 1004 aa11.48□□□□□ -0.57
RAB3GAP1-202ENST00000425393 PURBQ96QR8 312 aaKnown RBP11.47□□□□□ -0.57
RAB3GAP1-202ENST00000425393 ATP1B4Q9UN42 357 aaPredicted RBP11.47□□□□□ -0.57
RAB3GAP1-202ENST00000425393 ERFEQ4G0M1 354 aa11.46□□□□□ -0.57
RAB3GAP1-202ENST00000425393 VASH1Q7L8A9 365 aaPredicted RBP11.46□□□□□ -0.57
RAB3GAP1-202ENST00000425393 IRF7Q92985 503 aa11.46□□□□□ -0.57
RAB3GAP1-202ENST00000425393 FKBPLQ9UIM3 349 aa11.46□□□□□ -0.57
RAB3GAP1-202ENST00000425393 SCARF1Q14162 830 aa11.45□□□□□ -0.58
RAB3GAP1-202ENST00000425393 NR6A1Q15406 480 aa11.45□□□□□ -0.58
RAB3GAP1-202ENST00000425393 PDXDC2PQ6P474 469 aa11.45□□□□□ -0.58
RAB3GAP1-202ENST00000425393 AP1G2O75843 785 aa11.44□□□□□ -0.58
RAB3GAP1-202ENST00000425393 ARHGAP9Q9BRR9 750 aa11.43□□□□□ -0.58
RAB3GAP1-202ENST00000425393 ZC3H4Q9UPT8 1303 aaKnown RBP11.42□□□□□ -0.58
RAB3GAP1-202ENST00000425393 MEIOBQ8N635 442 aa11.42□□□□□ -0.58
RAB3GAP1-202ENST00000425393 HMX1Q9NP08 348 aaPredicted RBP11.41□□□□□ -0.58
RAB3GAP1-202ENST00000425393 USP17L8P0C7I0 530 aa11.4□□□□□ -0.58
RAB3GAP1-202ENST00000425393 CCDC116Q8IYX3 515 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms