RNA–Protein interactions for RNA: ENST00000424932.2

CKS1BP6-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 6, humanhuman

BASIC

Gene CKS1BP6, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP6-201ENST00000424932 ERICH6Q7L0X2 663 aa6.29□□□□□ -1.4
CKS1BP6-201ENST00000424932 TCP11L2Q8N4U5 519 aa6.29□□□□□ -1.4
CKS1BP6-201ENST00000424932 IPO9Q96P70 1041 aaKnown RBP6.29□□□□□ -1.4
CKS1BP6-201ENST00000424932 DMRT2Q9Y5R5 561 aa6.29□□□□□ -1.4
CKS1BP6-201ENST00000424932 AATKQ6ZMQ8 1374 aa6.29□□□□□ -1.4
CKS1BP6-201ENST00000424932 TNRQ92752 1358 aa6.29□□□□□ -1.4
CKS1BP6-201ENST00000424932 ARHGAP23Q9P227 1491 aa6.28□□□□□ -1.4
CKS1BP6-201ENST00000424932 FYB1O15117 783 aa6.28□□□□□ -1.4
CKS1BP6-201ENST00000424932 NUTM2DQ5VT03 806 aaPredicted RBP6.28□□□□□ -1.4
CKS1BP6-201ENST00000424932 HDGFL2Q7Z4V5 671 aaPredicted RBP6.28□□□□□ -1.4
CKS1BP6-201ENST00000424932 PLEKHF1Q96S99 279 aa6.28□□□□□ -1.4
CKS1BP6-201ENST00000424932 MYH16Q9H6N6 1097 aa6.28□□□□□ -1.4
CKS1BP6-201ENST00000424932 POGKQ9P215 609 aa6.28□□□□□ -1.4
CKS1BP6-201ENST00000424932 TMEM2Q9UHN6 1383 aa6.28□□□□□ -1.4
CKS1BP6-201ENST00000424932 MINK1Q8N4C8 1332 aaPredicted RBP6.27□□□□□ -1.41
CKS1BP6-201ENST00000424932 ZNF142P52746 1687 aaPredicted RBP6.27□□□□□ -1.41
CKS1BP6-201ENST00000424932 ADAMTS13Q76LX8 1427 aa6.27□□□□□ -1.41
CKS1BP6-201ENST00000424932 RARSP54136 660 aaKnown RBP6.27□□□□□ -1.41
CKS1BP6-201ENST00000424932 CDK19Q9BWU1 502 aa6.27□□□□□ -1.41
CKS1BP6-201ENST00000424932 PNNQ9H307 717 aaKnown RBP6.27□□□□□ -1.41
CKS1BP6-201ENST00000424932 STK26Q9P289 416 aa6.27□□□□□ -1.41
CKS1BP6-201ENST00000424932 METP08581 1390 aa6.27□□□□□ -1.41
CKS1BP6-201ENST00000424932 PLEKHG1Q9ULL1 1385 aa6.27□□□□□ -1.41
CKS1BP6-201ENST00000424932 MARF1Q9Y4F3 1742 aaKnown RBP6.27□□□□□ -1.41
CKS1BP6-201ENST00000424932 N4BP2Q86UW6 1770 aaPredicted RBP6.26□□□□□ -1.41
CKS1BP6-201ENST00000424932 PTCH1Q13635 1447 aa6.26□□□□□ -1.41
CKS1BP6-201ENST00000424932 BCAR3O75815 825 aa6.26□□□□□ -1.41
CKS1BP6-201ENST00000424932 CLUAP1Q96AJ1 413 aa6.26□□□□□ -1.41
CKS1BP6-201ENST00000424932 STAG3Q9UJ98 1225 aa6.26□□□□□ -1.41
CKS1BP6-201ENST00000424932 RGPD8O14715 1765 aaPredicted RBP6.26□□□□□ -1.41
CKS1BP6-201ENST00000424932 MAPK8IP3Q9UPT6 1336 aa6.25□□□□□ -1.41
CKS1BP6-201ENST00000424932 PEAK1Q9H792 1746 aa6.25□□□□□ -1.41
CKS1BP6-201ENST00000424932 WASLO00401 505 aaPredicted RBP6.25□□□□□ -1.41
CKS1BP6-201ENST00000424932 DIAPH1O60610 1272 aaKnown RBP6.25□□□□□ -1.41
CKS1BP6-201ENST00000424932 U2AF1L5P0DN76 240 aaPredicted RBP6.25□□□□□ -1.41
CKS1BP6-201ENST00000424932 TMPOP42166 694 aaKnown RBP6.25□□□□□ -1.41
CKS1BP6-201ENST00000424932 TNNT2P45379 298 aaPredicted RBP6.25□□□□□ -1.41
CKS1BP6-201ENST00000424932 HDGFP51858 240 aaKnown RBP6.25□□□□□ -1.41
CKS1BP6-201ENST00000424932 U2AF1Q01081 240 aaKnown RBP eCLIP6.25□□□□□ -1.41
CKS1BP6-201ENST00000424932 SAFB2Q14151 953 aaKnown RBP eCLIP6.25□□□□□ -1.41
CKS1BP6-201ENST00000424932 LRRC37A3O60309 1634 aa6.25□□□□□ -1.41
CKS1BP6-201ENST00000424932 OVOS2A0A0J9YW53 1432 aa6.25□□□□□ -1.41
CKS1BP6-201ENST00000424932 OVOS2Q6IE36 1432 aa6.25□□□□□ -1.41
CKS1BP6-201ENST00000424932 FCHSD2O94868 740 aa6.24□□□□□ -1.41
CKS1BP6-201ENST00000424932 FAM161AQ3B820 660 aa6.24□□□□□ -1.41
CKS1BP6-201ENST00000424932 PMFBP1Q8TBY8 1022 aa6.24□□□□□ -1.41
CKS1BP6-201ENST00000424932 ZNF428Q96B54 188 aa6.24□□□□□ -1.41
CKS1BP6-201ENST00000424932 DDRGK1Q96HY6 314 aa6.24□□□□□ -1.41
CKS1BP6-201ENST00000424932 GGNBP2Q9H3C7 697 aa6.24□□□□□ -1.41
CKS1BP6-201ENST00000424932 CABP1Q9NZU7 370 aa6.24□□□□□ -1.41
CKS1BP6-201ENST00000424932 TRIM35Q9UPQ4 493 aa6.24□□□□□ -1.41
CKS1BP6-201ENST00000424932 CACNA1FO60840 1977 aa6.24□□□□□ -1.41
CKS1BP6-201ENST00000424932 PIK3C2AO00443 1686 aa6.23□□□□□ -1.41
CKS1BP6-201ENST00000424932 CHD2O14647 1828 aaKnown RBP6.23□□□□□ -1.41
CKS1BP6-201ENST00000424932 PAK3O75914 559 aaPredicted RBP6.23□□□□□ -1.41
CKS1BP6-201ENST00000424932 CANXP27824 592 aaKnown RBP6.23□□□□□ -1.41
CKS1BP6-201ENST00000424932 BRPF1P55201 1214 aaPredicted RBP6.23□□□□□ -1.41
CKS1BP6-201ENST00000424932 C8orf34Q49A92 452 aa6.23□□□□□ -1.41
CKS1BP6-201ENST00000424932 RSPH6AQ9H0K4 717 aa6.23□□□□□ -1.41
CKS1BP6-201ENST00000424932 ZBTB47Q9UFB7 747 aaPredicted RBP6.23□□□□□ -1.41
CKS1BP6-201ENST00000424932 RRP7AQ9Y3A4 280 aaKnown RBP6.23□□□□□ -1.41
CKS1BP6-201ENST00000424932 SSH2Q76I76 1423 aa6.23□□□□□ -1.41
CKS1BP6-201ENST00000424932 KIF16BQ96L93 1317 aa6.23□□□□□ -1.41
CKS1BP6-201ENST00000424932 CEP170BQ9Y4F5 1589 aaPredicted RBP6.23□□□□□ -1.41
CKS1BP6-201ENST00000424932 PIK3R4Q99570 1358 aa6.22□□□□□ -1.41
CKS1BP6-201ENST00000424932 ROBO2Q9HCK4 1378 aa6.22□□□□□ -1.41
CKS1BP6-201ENST00000424932 PHRF1Q9P1Y6 1649 aaKnown RBP6.22□□□□□ -1.41
CKS1BP6-201ENST00000424932 MVPQ14764 893 aaKnown RBP6.22□□□□□ -1.41
CKS1BP6-201ENST00000424932 ALDH1L2Q3SY69 923 aa6.22□□□□□ -1.41
CKS1BP6-201ENST00000424932 ZKSCAN2Q63HK3 967 aa6.22□□□□□ -1.41
CKS1BP6-201ENST00000424932 PANK1Q8TE04 598 aa6.22□□□□□ -1.41
CKS1BP6-201ENST00000424932 ESF1Q9H501 851 aaKnown RBP6.22□□□□□ -1.41
CKS1BP6-201ENST00000424932 POLKQ9UBT6 870 aa6.22□□□□□ -1.41
CKS1BP6-201ENST00000424932 CCDC61Q9Y6R9 512 aa6.22□□□□□ -1.41
CKS1BP6-201ENST00000424932 USP6P35125 1406 aa6.22□□□□□ -1.41
CKS1BP6-201ENST00000424932 USP31Q70CQ4 1352 aa6.21□□□□□ -1.41
CKS1BP6-201ENST00000424932 FAM208AQ9UK61 1670 aaKnown RBP6.21□□□□□ -1.42
CKS1BP6-201ENST00000424932 U2SURPO15042 1029 aaKnown RBP6.21□□□□□ -1.42
CKS1BP6-201ENST00000424932 IGHDP01880 384 aa6.21□□□□□ -1.42
CKS1BP6-201ENST00000424932 CALD1Q05682 793 aaKnown RBP6.21□□□□□ -1.42
CKS1BP6-201ENST00000424932 NEUROD2Q15784 382 aa6.21□□□□□ -1.42
CKS1BP6-201ENST00000424932 WAPLQ7Z5K2 1190 aa6.21□□□□□ -1.42
CKS1BP6-201ENST00000424932 NUDT16Q96DE0 195 aaKnown RBP6.21□□□□□ -1.42
CKS1BP6-201ENST00000424932 ZNF692Q9BU19 519 aaPredicted RBP6.21□□□□□ -1.42
CKS1BP6-201ENST00000424932 COG6Q9Y2V7 657 aa6.21□□□□□ -1.42
CKS1BP6-201ENST00000424932 ANKARQ7Z5J8 1434 aa6.21□□□□□ -1.42
CKS1BP6-201ENST00000424932 PRR36Q9H6K5 1346 aa6.21□□□□□ -1.42
CKS1BP6-201ENST00000424932 LTN1O94822 1766 aa6.21□□□□□ -1.42
CKS1BP6-201ENST00000424932 PTPRUQ92729 1446 aa6.2□□□□□ -1.42
CKS1BP6-201ENST00000424932 PLEKHG3A1L390 1219 aa6.2□□□□□ -1.42
CKS1BP6-201ENST00000424932 RLBP1P12271 317 aa6.2□□□□□ -1.42
CKS1BP6-201ENST00000424932 IL13P35225 146 aa6.2□□□□□ -1.42
CKS1BP6-201ENST00000424932 EXOSC9Q06265 439 aaKnown RBP6.2□□□□□ -1.42
CKS1BP6-201ENST00000424932 NFE2L2Q16236 605 aa6.2□□□□□ -1.42
CKS1BP6-201ENST00000424932 DZIP1LQ8IYY4 767 aaKnown RBP6.2□□□□□ -1.42
CKS1BP6-201ENST00000424932 USP35Q9P2H5 1018 aa6.2□□□□□ -1.42
CKS1BP6-201ENST00000424932 DDX19BQ9UMR2 479 aa6.2□□□□□ -1.42
CKS1BP6-201ENST00000424932 NEFMP07197 916 aa6.19□□□□□ -1.42
CKS1BP6-201ENST00000424932 ZNF853P0CG23 659 aa6.19□□□□□ -1.42
CKS1BP6-201ENST00000424932 TRIM27P14373 513 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms