RNA–Protein interactions for RNA: ENST00000424751.2

LINC00839-201, long intergenic non-protein coding RNA 839, humanhuman

TSL 2

Gene LINC00839, Length 2,252 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00839-201ENST00000424751 MON2Q7Z3U7 1717 aa18.98■□□□□ 0.63
LINC00839-201ENST00000424751 NINLQ9Y2I6 1382 aa18.98■□□□□ 0.63
LINC00839-201ENST00000424751 SHPRHQ149N8 1683 aa18.98■□□□□ 0.63
LINC00839-201ENST00000424751 STRCQ7RTU9 1775 aa18.97■□□□□ 0.63
LINC00839-201ENST00000424751 ANKRD26Q9UPS8 1709 aa18.96■□□□□ 0.63
LINC00839-201ENST00000424751 PIK3R4Q99570 1358 aa18.96■□□□□ 0.63
LINC00839-201ENST00000424751 FMN2Q9NZ56 1722 aa18.95■□□□□ 0.62
LINC00839-201ENST00000424751 MAP2P11137 1827 aaKnown RBP18.93■□□□□ 0.62
LINC00839-201ENST00000424751 SOX12O15370 315 aa18.93■□□□□ 0.62
LINC00839-201ENST00000424751 B4GALNT3Q6L9W6 998 aa18.93■□□□□ 0.62
LINC00839-201ENST00000424751 NRKQ7Z2Y5 1582 aa18.92■□□□□ 0.62
LINC00839-201ENST00000424751 NUTM2GQ5VZR2 741 aa18.92■□□□□ 0.62
LINC00839-201ENST00000424751 C14orf37Q86TY3 774 aa18.91■□□□□ 0.62
LINC00839-201ENST00000424751 BLMP54132 1417 aaPredicted RBP18.91■□□□□ 0.62
LINC00839-201ENST00000424751 EDC4Q6P2E9 1401 aaKnown RBP18.91■□□□□ 0.62
LINC00839-201ENST00000424751 PLEKHG3A1L390 1219 aa18.91■□□□□ 0.62
LINC00839-201ENST00000424751 PPM1GO15355 546 aaPredicted RBP18.91■□□□□ 0.62
LINC00839-201ENST00000424751 PROSER2Q86WR7 435 aaPredicted RBP18.91■□□□□ 0.62
LINC00839-201ENST00000424751 CDCA7LQ96GN5 454 aa18.91■□□□□ 0.62
LINC00839-201ENST00000424751 EMILIN1Q9Y6C2 1016 aa18.91■□□□□ 0.62
LINC00839-201ENST00000424751 RRS1Q15050 365 aaKnown RBP18.9■□□□□ 0.62
LINC00839-201ENST00000424751 WDR43Q15061 677 aaKnown RBP eCLIP18.9■□□□□ 0.62
LINC00839-201ENST00000424751 ORAI2Q96SN7 254 aa18.9■□□□□ 0.62
LINC00839-201ENST00000424751 TTC21BQ7Z4L5 1316 aa18.9■□□□□ 0.62
LINC00839-201ENST00000424751 XPCQ01831 940 aaPredicted RBP18.89■□□□□ 0.61
LINC00839-201ENST00000424751 NWD1Q149M9 1564 aa18.89■□□□□ 0.61
LINC00839-201ENST00000424751 USP6P35125 1406 aa18.89■□□□□ 0.61
LINC00839-201ENST00000424751 NSD2O96028 1365 aa18.89■□□□□ 0.61
LINC00839-201ENST00000424751 PLEKHG5O94827 1062 aa18.88■□□□□ 0.61
LINC00839-201ENST00000424751 NGDNQ8NEJ9 315 aaKnown RBP18.88■□□□□ 0.61
LINC00839-201ENST00000424751 POLR3AO14802 1390 aaPredicted RBP18.88■□□□□ 0.61
LINC00839-201ENST00000424751 POLKQ9UBT6 870 aa18.88■□□□□ 0.61
LINC00839-201ENST00000424751 ADGRL3Q9HAR2 1447 aa18.87■□□□□ 0.61
LINC00839-201ENST00000424751 COL3A1P02461 1466 aaPredicted RBP18.86■□□□□ 0.61
LINC00839-201ENST00000424751 DDX17Q92841 729 aaKnown RBP18.86■□□□□ 0.61
LINC00839-201ENST00000424751 NOP58Q9Y2X3 529 aaKnown RBP18.86■□□□□ 0.61
LINC00839-201ENST00000424751 SSH2Q76I76 1423 aa18.86■□□□□ 0.61
LINC00839-201ENST00000424751 SMG6Q86US8 1419 aaKnown RBP18.86■□□□□ 0.61
LINC00839-201ENST00000424751 RRP7AQ9Y3A4 280 aaKnown RBP18.85■□□□□ 0.61
LINC00839-201ENST00000424751 DMRT2Q9Y5R5 561 aa18.85■□□□□ 0.61
LINC00839-201ENST00000424751 ZNF335Q9H4Z2 1342 aaPredicted RBP18.85■□□□□ 0.61
LINC00839-201ENST00000424751 APAF1O14727 1248 aa18.85■□□□□ 0.61
LINC00839-201ENST00000424751 ESCO1Q5FWF5 840 aa18.85■□□□□ 0.61
LINC00839-201ENST00000424751 XIRP1Q702N8 1843 aaKnown RBP18.84■□□□□ 0.61
LINC00839-201ENST00000424751 TMEM94Q12767 1356 aa18.84■□□□□ 0.61
LINC00839-201ENST00000424751 PIK3C2AO00443 1686 aa18.84■□□□□ 0.61
LINC00839-201ENST00000424751 DEKP35659 375 aaKnown RBP18.84■□□□□ 0.61
LINC00839-201ENST00000424751 MARF1Q9Y4F3 1742 aaKnown RBP18.82■□□□□ 0.6
LINC00839-201ENST00000424751 ZNF692Q9BU19 519 aaPredicted RBP18.82■□□□□ 0.6
LINC00839-201ENST00000424751 COG3Q96JB2 828 aa18.81■□□□□ 0.6
LINC00839-201ENST00000424751 PHF8Q9UPP1 1060 aa18.81■□□□□ 0.6
LINC00839-201ENST00000424751 U2SURPO15042 1029 aaKnown RBP18.81■□□□□ 0.6
LINC00839-201ENST00000424751 PAK3O75914 559 aaPredicted RBP18.81■□□□□ 0.6
LINC00839-201ENST00000424751 NEUROD2Q15784 382 aa18.81■□□□□ 0.6
LINC00839-201ENST00000424751 SPINK5Q9NQ38 1064 aaPredicted RBP18.81■□□□□ 0.6
LINC00839-201ENST00000424751 FOXO3O43524 673 aa18.8■□□□□ 0.6
LINC00839-201ENST00000424751 PEAK1Q9H792 1746 aa18.8■□□□□ 0.6
LINC00839-201ENST00000424751 OVOS2A0A0J9YW53 1432 aa18.8■□□□□ 0.6
LINC00839-201ENST00000424751 OVOS2Q6IE36 1432 aa18.8■□□□□ 0.6
LINC00839-201ENST00000424751 U2AF1L5P0DN76 240 aaPredicted RBP18.8■□□□□ 0.6
LINC00839-201ENST00000424751 U2AF1Q01081 240 aaKnown RBP eCLIP18.8■□□□□ 0.6
LINC00839-201ENST00000424751 ANKARQ7Z5J8 1434 aa18.79■□□□□ 0.6
LINC00839-201ENST00000424751 NUDCQ9Y266 331 aa18.79■□□□□ 0.6
LINC00839-201ENST00000424751 RNF123Q5XPI4 1314 aa18.78■□□□□ 0.6
LINC00839-201ENST00000424751 ANP32AP39687 249 aaKnown RBP18.76■□□□□ 0.59
LINC00839-201ENST00000424751 CCDC136Q96JN2 1154 aa18.76■□□□□ 0.59
LINC00839-201ENST00000424751 HMOX1P09601 288 aa18.76■□□□□ 0.59
LINC00839-201ENST00000424751 PNPLA6Q8IY17 1366 aa18.76■□□□□ 0.59
LINC00839-201ENST00000424751 CFAP53Q96M91 514 aa18.75■□□□□ 0.59
LINC00839-201ENST00000424751 NLRP6P59044 892 aa18.74■□□□□ 0.59
LINC00839-201ENST00000424751 HSP90AB2PQ58FF8 381 aa18.74■□□□□ 0.59
LINC00839-201ENST00000424751 C1orf167Q5SNV9 1468 aa18.74■□□□□ 0.59
LINC00839-201ENST00000424751 ABTB2Q8N961 1025 aa18.74■□□□□ 0.59
LINC00839-201ENST00000424751 C19orf44Q9H6X5 657 aa18.74■□□□□ 0.59
LINC00839-201ENST00000424751 DIAPH1O60610 1272 aaKnown RBP18.73■□□□□ 0.59
LINC00839-201ENST00000424751 TCP11L2Q8N4U5 519 aa18.73■□□□□ 0.59
LINC00839-201ENST00000424751 ZNF521Q96K83 1311 aa18.73■□□□□ 0.59
LINC00839-201ENST00000424751 IPO9Q96P70 1041 aaKnown RBP18.72■□□□□ 0.59
LINC00839-201ENST00000424751 MST1RQ04912 1400 aa18.72■□□□□ 0.59
LINC00839-201ENST00000424751 IQSEC2Q5JU85 1478 aa18.71■□□□□ 0.59
LINC00839-201ENST00000424751 MAP3K19Q56UN5 1328 aa18.71■□□□□ 0.59
LINC00839-201ENST00000424751 IL13P35225 146 aa18.71■□□□□ 0.59
LINC00839-201ENST00000424751 PSME1Q06323 249 aa18.71■□□□□ 0.59
LINC00839-201ENST00000424751 PLEKHF1Q96S99 279 aa18.71■□□□□ 0.59
LINC00839-201ENST00000424751 LRRC7Q96NW7 1537 aa18.71■□□□□ 0.59
LINC00839-201ENST00000424751 AEBP1Q8IUX7 1158 aa18.7■□□□□ 0.58
LINC00839-201ENST00000424751 INSRP06213 1382 aa18.7■□□□□ 0.58
LINC00839-201ENST00000424751 PHACTR3Q96KR7 559 aa18.7■□□□□ 0.58
LINC00839-201ENST00000424751 AATKQ6ZMQ8 1374 aa18.69■□□□□ 0.58
LINC00839-201ENST00000424751 USP31Q70CQ4 1352 aa18.69■□□□□ 0.58
LINC00839-201ENST00000424751 NBR1Q14596 966 aa18.69■□□□□ 0.58
LINC00839-201ENST00000424751 LMOD2Q6P5Q4 547 aa18.69■□□□□ 0.58
LINC00839-201ENST00000424751 RUNDC1Q96C34 613 aa18.69■□□□□ 0.58
LINC00839-201ENST00000424751 TTC21AQ8NDW8 1320 aa18.68■□□□□ 0.58
LINC00839-201ENST00000424751 EIF4A2Q14240 407 aaKnown RBP18.68■□□□□ 0.58
LINC00839-201ENST00000424751 ATF3P18847 181 aa18.67■□□□□ 0.58
LINC00839-201ENST00000424751 CDK12Q9NYV4 1490 aaPredicted RBP18.67■□□□□ 0.58
LINC00839-201ENST00000424751 ZBTB7CA1YPR0 619 aa18.67■□□□□ 0.58
LINC00839-201ENST00000424751 ZBTB47Q9UFB7 747 aaPredicted RBP18.67■□□□□ 0.58
LINC00839-201ENST00000424751 WWC1Q8IX03 1113 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms