RNA–Protein interactions for RNA: ENST00000423941.5

HDAC6-205, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-205ENST00000423941 NRKQ7Z2Y5 1582 aa25.82■■□□□ 1.72
HDAC6-205ENST00000423941 ABCA3Q99758 1704 aa25.82■■□□□ 1.72
HDAC6-205ENST00000423941 MARF1Q9Y4F3 1742 aaKnown RBP25.82■■□□□ 1.72
HDAC6-205ENST00000423941 NUTM2BA6NNL0 878 aaPredicted RBP25.8■■□□□ 1.72
HDAC6-205ENST00000423941 NUTM2EB1AL46 878 aaPredicted RBP25.8■■□□□ 1.72
HDAC6-205ENST00000423941 NUTM2AQ8IVF1 878 aaPredicted RBP25.8■■□□□ 1.72
HDAC6-205ENST00000423941 PAK3O75914 559 aaPredicted RBP25.79■■□□□ 1.72
HDAC6-205ENST00000423941 MYOM1P52179 1685 aa25.78■■□□□ 1.72
HDAC6-205ENST00000423941 TMC1Q8TDI8 760 aa25.78■■□□□ 1.72
HDAC6-205ENST00000423941 KTN1Q86UP2 1357 aaKnown RBP25.78■■□□□ 1.72
HDAC6-205ENST00000423941 LMOD2Q6P5Q4 547 aa25.77■■□□□ 1.72
HDAC6-205ENST00000423941 TERF2IPQ9NYB0 399 aa25.77■■□□□ 1.72
HDAC6-205ENST00000423941 RGS17Q9UGC6 210 aaPredicted RBP25.77■■□□□ 1.72
HDAC6-205ENST00000423941 TTC21BQ7Z4L5 1316 aa25.77■■□□□ 1.72
HDAC6-205ENST00000423941 CABLES1Q8TDN4 633 aa25.76■■□□□ 1.71
HDAC6-205ENST00000423941 A0A1W2PP64 1363 aa25.76■■□□□ 1.71
HDAC6-205ENST00000423941 PIK3C2AO00443 1686 aa25.75■■□□□ 1.71
HDAC6-205ENST00000423941 TTC21AQ8NDW8 1320 aa25.75■■□□□ 1.71
HDAC6-205ENST00000423941 C11orf95C9JLR9 678 aaPredicted RBP25.75■■□□□ 1.71
HDAC6-205ENST00000423941 HDGFL2Q7Z4V5 671 aaPredicted RBP25.75■■□□□ 1.71
HDAC6-205ENST00000423941 ANKRD36BQ8N2N9 1353 aa25.74■■□□□ 1.71
HDAC6-205ENST00000423941 ABTB2Q8N961 1025 aa25.74■■□□□ 1.71
HDAC6-205ENST00000423941 EDC4Q6P2E9 1401 aaKnown RBP25.73■■□□□ 1.71
HDAC6-205ENST00000423941 USP19O94966 1318 aa25.73■■□□□ 1.71
HDAC6-205ENST00000423941 PHRF1Q9P1Y6 1649 aaKnown RBP25.72■■□□□ 1.71
HDAC6-205ENST00000423941 USP54Q70EL1 1684 aa25.71■■□□□ 1.71
HDAC6-205ENST00000423941 ADAMTS2O95450 1211 aa25.71■■□□□ 1.71
HDAC6-205ENST00000423941 NLRP13Q86W25 1043 aa25.71■■□□□ 1.71
HDAC6-205ENST00000423941 MEX3CQ5U5Q3 659 aaKnown RBP25.7■■□□□ 1.7
HDAC6-205ENST00000423941 FNBP4Q8N3X1 1017 aaPredicted RBP25.7■■□□□ 1.7
HDAC6-205ENST00000423941 NUTM2GQ5VZR2 741 aa25.68■■□□□ 1.7
HDAC6-205ENST00000423941 USP31Q70CQ4 1352 aa25.68■■□□□ 1.7
HDAC6-205ENST00000423941 PHF23Q9BUL5 403 aaPredicted RBP25.67■■□□□ 1.7
HDAC6-205ENST00000423941 SLIT3O75094 1523 aa25.67■■□□□ 1.7
HDAC6-205ENST00000423941 NLRP6P59044 892 aa25.66■■□□□ 1.7
HDAC6-205ENST00000423941 C8orf37Q96NL8 207 aa25.66■■□□□ 1.7
HDAC6-205ENST00000423941 AFF2P51816 1311 aa25.65■■□□□ 1.7
HDAC6-205ENST00000423941 SLIT2O94813 1529 aa25.65■■□□□ 1.7
HDAC6-205ENST00000423941 NGLY1Q96IV0 654 aa25.65■■□□□ 1.7
HDAC6-205ENST00000423941 ZEB1P37275 1124 aaPredicted RBP25.64■■□□□ 1.7
HDAC6-205ENST00000423941 CARD14Q9BXL6 1004 aa25.64■■□□□ 1.7
HDAC6-205ENST00000423941 FAM83GA6ND36 823 aa25.63■■□□□ 1.69
HDAC6-205ENST00000423941 GCP02774 474 aa25.63■■□□□ 1.69
HDAC6-205ENST00000423941 KIF7Q2M1P5 1343 aa25.63■■□□□ 1.69
HDAC6-205ENST00000423941 BCL9LQ86UU0 1499 aa25.62■■□□□ 1.69
HDAC6-205ENST00000423941 HAP1P54257 671 aaPredicted RBP25.62■■□□□ 1.69
HDAC6-205ENST00000423941 ZNF772Q68DY9 489 aaPredicted RBP25.62■■□□□ 1.69
HDAC6-205ENST00000423941 POTEAQ6S8J7 498 aa25.62■■□□□ 1.69
HDAC6-205ENST00000423941 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.62■■□□□ 1.69
HDAC6-205ENST00000423941 NWD2Q9ULI1 1742 aa25.62■■□□□ 1.69
HDAC6-205ENST00000423941 CPDO75976 1380 aa25.61■■□□□ 1.69
HDAC6-205ENST00000423941 NME9Q86XW9 330 aa25.61■■□□□ 1.69
HDAC6-205ENST00000423941 COL14A1Q05707 1796 aaKnown RBP25.61■■□□□ 1.69
HDAC6-205ENST00000423941 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.6■■□□□ 1.69
HDAC6-205ENST00000423941 PLEKHG5O94827 1062 aa25.6■■□□□ 1.69
HDAC6-205ENST00000423941 ZRANB1Q9UGI0 708 aa25.6■■□□□ 1.69
HDAC6-205ENST00000423941 PLCH1Q4KWH8 1693 aa25.6■■□□□ 1.69
HDAC6-205ENST00000423941 OVOS2A0A0J9YW53 1432 aa25.59■■□□□ 1.69
HDAC6-205ENST00000423941 OVOS2Q6IE36 1432 aa25.59■■□□□ 1.69
HDAC6-205ENST00000423941 KIAA0232Q92628 1395 aa25.57■■□□□ 1.68
HDAC6-205ENST00000423941 FYB1O15117 783 aa25.57■■□□□ 1.68
HDAC6-205ENST00000423941 USP21Q9UK80 565 aa25.57■■□□□ 1.68
HDAC6-205ENST00000423941 NFAT5O94916 1531 aa25.57■■□□□ 1.68
HDAC6-205ENST00000423941 CCDC7Q96M83 1385 aa25.56■■□□□ 1.68
HDAC6-205ENST00000423941 KCNH5Q8NCM2 988 aa25.56■■□□□ 1.68
HDAC6-205ENST00000423941 ZC3H6P61129 1189 aaKnown RBP25.55■■□□□ 1.68
HDAC6-205ENST00000423941 POLR3GLQ9BT43 218 aa25.55■■□□□ 1.68
HDAC6-205ENST00000423941 WASHC2AQ641Q2 1341 aa25.55■■□□□ 1.68
HDAC6-205ENST00000423941 LMO7Q8WWI1 1683 aa25.55■■□□□ 1.68
HDAC6-205ENST00000423941 NRAPQ86VF7 1730 aa25.54■■□□□ 1.68
HDAC6-205ENST00000423941 PANK3Q9H999 370 aa25.54■■□□□ 1.68
HDAC6-205ENST00000423941 COL18A1P39060 1754 aa25.54■■□□□ 1.68
HDAC6-205ENST00000423941 ATRNO75882 1429 aa25.54■■□□□ 1.68
HDAC6-205ENST00000423941 KIF20BQ96Q89 1820 aa25.53■■□□□ 1.68
HDAC6-205ENST00000423941 UNC5CLQ8IV45 518 aa25.53■■□□□ 1.68
HDAC6-205ENST00000423941 QTRT2Q9H974 415 aaKnown RBP25.53■■□□□ 1.68
HDAC6-205ENST00000423941 PRDM11Q9NQV5 511 aa25.53■■□□□ 1.68
HDAC6-205ENST00000423941 NSD3Q9BZ95 1437 aa25.53■■□□□ 1.68
HDAC6-205ENST00000423941 ILDR2Q71H61 639 aa25.52■■□□□ 1.68
HDAC6-205ENST00000423941 ARHGEF25Q86VW2 580 aa25.52■■□□□ 1.68
HDAC6-205ENST00000423941 AATKQ6ZMQ8 1374 aa25.5■■□□□ 1.67
HDAC6-205ENST00000423941 TRPC5Q9UL62 973 aaPredicted RBP25.5■■□□□ 1.67
HDAC6-205ENST00000423941 CAMTA1Q9Y6Y1 1673 aa25.5■■□□□ 1.67
HDAC6-205ENST00000423941 CHRNA2Q15822 529 aa25.49■■□□□ 1.67
HDAC6-205ENST00000423941 BTG4Q9NY30 223 aa25.49■■□□□ 1.67
HDAC6-205ENST00000423941 COG3Q96JB2 828 aa25.48■■□□□ 1.67
HDAC6-205ENST00000423941 GGNBP2Q9H3C7 697 aa25.47■■□□□ 1.67
HDAC6-205ENST00000423941 CGNL1Q0VF96 1302 aa25.46■■□□□ 1.67
HDAC6-205ENST00000423941 PER1O15534 1290 aaPredicted RBP25.46■■□□□ 1.67
HDAC6-205ENST00000423941 VPS72Q15906 364 aa25.46■■□□□ 1.67
HDAC6-205ENST00000423941 ABCC6O95255 1503 aa25.46■■□□□ 1.67
HDAC6-205ENST00000423941 RBM6P78332 1123 aaKnown RBP25.45■■□□□ 1.66
HDAC6-205ENST00000423941 LTN1O94822 1766 aa25.44■■□□□ 1.66
HDAC6-205ENST00000423941 ANKRD26Q9UPS8 1709 aa25.44■■□□□ 1.66
HDAC6-205ENST00000423941 RXRBP28702 533 aa25.44■■□□□ 1.66
HDAC6-205ENST00000423941 GJD4Q96KN9 370 aaPredicted RBP25.44■■□□□ 1.66
HDAC6-205ENST00000423941 CDK12Q9NYV4 1490 aaPredicted RBP25.44■■□□□ 1.66
HDAC6-205ENST00000423941 RGPD5Q99666 1765 aa25.44■■□□□ 1.66
HDAC6-205ENST00000423941 GLI3P10071 1580 aa25.43■■□□□ 1.66
HDAC6-205ENST00000423941 AXIN2Q9Y2T1 843 aa25.42■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms