RNA–Protein interactions for RNA: ENST00000423487.6

ABCA1-203, Transcript of ATP binding cassette subfamily A member 1, humanhuman

TSL 2 BASIC

Gene ABCA1, Length 1,540 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1-203ENST00000423487 CNGB1Q14028 1251 aaPredicted RBP21.73■■□□□ 1.07
ABCA1-203ENST00000423487 PRKRIP1Q9H875 184 aaPredicted RBP21.73■■□□□ 1.07
ABCA1-203ENST00000423487 FYB1O15117 783 aa21.72■■□□□ 1.07
ABCA1-203ENST00000423487 KRT28Q7Z3Y7 464 aa21.72■■□□□ 1.07
ABCA1-203ENST00000423487 RALBP1Q15311 655 aa21.71■■□□□ 1.07
ABCA1-203ENST00000423487 NRKQ7Z2Y5 1582 aa21.71■■□□□ 1.07
ABCA1-203ENST00000423487 UBAP1LF5GYI3 381 aa21.7■■□□□ 1.07
ABCA1-203ENST00000423487 PAK3O75914 559 aaPredicted RBP21.7■■□□□ 1.06
ABCA1-203ENST00000423487 XPCQ01831 940 aaPredicted RBP21.69■■□□□ 1.06
ABCA1-203ENST00000423487 NME9Q86XW9 330 aa21.69■■□□□ 1.06
ABCA1-203ENST00000423487 GGNBP2Q9H3C7 697 aa21.69■■□□□ 1.06
ABCA1-203ENST00000423487 PARD3Q8TEW0 1356 aa21.68■■□□□ 1.06
ABCA1-203ENST00000423487 MORC1Q86VD1 984 aa21.67■■□□□ 1.06
ABCA1-203ENST00000423487 DDX17Q92841 729 aaKnown RBP21.67■■□□□ 1.06
ABCA1-203ENST00000423487 MIER1Q8N108 512 aa21.66■■□□□ 1.06
ABCA1-203ENST00000423487 ABTB2Q8N961 1025 aa21.65■■□□□ 1.06
ABCA1-203ENST00000423487 COG3Q96JB2 828 aa21.65■■□□□ 1.06
ABCA1-203ENST00000423487 SBNO1A3KN83 1393 aa21.65■■□□□ 1.06
ABCA1-203ENST00000423487 SOS2Q07890 1332 aaPredicted RBP21.65■■□□□ 1.06
ABCA1-203ENST00000423487 PXDNQ92626 1479 aa21.64■■□□□ 1.06
ABCA1-203ENST00000423487 ROBO1Q9Y6N7 1651 aa21.64■■□□□ 1.06
ABCA1-203ENST00000423487 KIF20BQ96Q89 1820 aa21.64■■□□□ 1.05
ABCA1-203ENST00000423487 USP31Q70CQ4 1352 aa21.64■■□□□ 1.05
ABCA1-203ENST00000423487 PIP4K2BP78356 416 aa21.64■■□□□ 1.05
ABCA1-203ENST00000423487 SCAF1Q9H7N4 1312 aaKnown RBP21.63■■□□□ 1.05
ABCA1-203ENST00000423487 NLRP6P59044 892 aa21.62■■□□□ 1.05
ABCA1-203ENST00000423487 ZRANB1Q9UGI0 708 aa21.62■■□□□ 1.05
ABCA1-203ENST00000423487 MYBBP1AQ9BQG0 1328 aaKnown RBP21.62■■□□□ 1.05
ABCA1-203ENST00000423487 NHSL1Q5SYE7 1610 aa21.61■■□□□ 1.05
ABCA1-203ENST00000423487 TRPM3Q9HCF6 1732 aaPredicted RBP21.61■■□□□ 1.05
ABCA1-203ENST00000423487 OVOS2A0A0J9YW53 1432 aa21.6■■□□□ 1.05
ABCA1-203ENST00000423487 TNS3Q68CZ2 1445 aa21.6■■□□□ 1.05
ABCA1-203ENST00000423487 OVOS2Q6IE36 1432 aa21.6■■□□□ 1.05
ABCA1-203ENST00000423487 LMOD2Q6P5Q4 547 aa21.6■■□□□ 1.05
ABCA1-203ENST00000423487 NLRP13Q86W25 1043 aa21.6■■□□□ 1.05
ABCA1-203ENST00000423487 SPATA31A3Q5VYP0 1347 aa21.6■■□□□ 1.05
ABCA1-203ENST00000423487 AHDC1Q5TGY3 1603 aaPredicted RBP21.6■■□□□ 1.05
ABCA1-203ENST00000423487 PIK3C2AO00443 1686 aa21.59■■□□□ 1.05
ABCA1-203ENST00000423487 ANKRD26Q9UPS8 1709 aa21.59■■□□□ 1.05
ABCA1-203ENST00000423487 NUTM2GQ5VZR2 741 aa21.59■■□□□ 1.05
ABCA1-203ENST00000423487 ARHGEF10O15013 1369 aa21.58■■□□□ 1.05
ABCA1-203ENST00000423487 TNNT2P45379 298 aaPredicted RBP21.58■■□□□ 1.04
ABCA1-203ENST00000423487 PPP2R1AP30153 589 aa21.57■■□□□ 1.04
ABCA1-203ENST00000423487 CCER2I3L3R5 266 aa21.56■■□□□ 1.04
ABCA1-203ENST00000423487 LRRC59Q96AG4 307 aaKnown RBP21.55■■□□□ 1.04
ABCA1-203ENST00000423487 ALS2Q96Q42 1657 aa21.55■■□□□ 1.04
ABCA1-203ENST00000423487 USP54Q70EL1 1684 aa21.54■■□□□ 1.04
ABCA1-203ENST00000423487 AATKQ6ZMQ8 1374 aa21.54■■□□□ 1.04
ABCA1-203ENST00000423487 KCNH5Q8NCM2 988 aa21.53■■□□□ 1.04
ABCA1-203ENST00000423487 USP19O94966 1318 aa21.52■■□□□ 1.04
ABCA1-203ENST00000423487 PHLPP1O60346 1717 aa21.49■■□□□ 1.03
ABCA1-203ENST00000423487 SOX12O15370 315 aa21.49■■□□□ 1.03
ABCA1-203ENST00000423487 MTHFSP49914 203 aa21.49■■□□□ 1.03
ABCA1-203ENST00000423487 MRS2Q9HD23 443 aa21.49■■□□□ 1.03
ABCA1-203ENST00000423487 SLIT3O75094 1523 aa21.48■■□□□ 1.03
ABCA1-203ENST00000423487 GCP02774 474 aa21.48■■□□□ 1.03
ABCA1-203ENST00000423487 FBLN1P23142 703 aa21.48■■□□□ 1.03
ABCA1-203ENST00000423487 POLKQ9UBT6 870 aa21.48■■□□□ 1.03
ABCA1-203ENST00000423487 MARF1Q9Y4F3 1742 aaKnown RBP21.47■■□□□ 1.03
ABCA1-203ENST00000423487 COL16A1Q07092 1604 aaPredicted RBP21.47■■□□□ 1.03
ABCA1-203ENST00000423487 MED1Q15648 1581 aaPredicted RBP21.47■■□□□ 1.03
ABCA1-203ENST00000423487 PLEKHG5O94827 1062 aa21.46■■□□□ 1.03
ABCA1-203ENST00000423487 RRS1Q15050 365 aaKnown RBP21.46■■□□□ 1.03
ABCA1-203ENST00000423487 CFAP53Q96M91 514 aa21.45■■□□□ 1.02
ABCA1-203ENST00000423487 SMG6Q86US8 1419 aaKnown RBP21.45■■□□□ 1.02
ABCA1-203ENST00000423487 CCDC184Q52MB2 194 aa21.45■■□□□ 1.02
ABCA1-203ENST00000423487 EMILIN1Q9Y6C2 1016 aa21.45■■□□□ 1.02
ABCA1-203ENST00000423487 CABLES1Q8TDN4 633 aa21.44■■□□□ 1.02
ABCA1-203ENST00000423487 PNPLA6Q8IY17 1366 aa21.44■■□□□ 1.02
ABCA1-203ENST00000423487 MAP3K19Q56UN5 1328 aa21.43■■□□□ 1.02
ABCA1-203ENST00000423487 NFAT5O94916 1531 aa21.43■■□□□ 1.02
ABCA1-203ENST00000423487 PPM1GO15355 546 aaPredicted RBP21.43■■□□□ 1.02
ABCA1-203ENST00000423487 HAP1P54257 671 aaPredicted RBP21.43■■□□□ 1.02
ABCA1-203ENST00000423487 KIF24Q5T7B8 1368 aa21.42■■□□□ 1.02
ABCA1-203ENST00000423487 AMPHP49418 695 aa21.41■■□□□ 1.02
ABCA1-203ENST00000423487 MAP2P11137 1827 aaKnown RBP21.4■■□□□ 1.02
ABCA1-203ENST00000423487 CDK12Q9NYV4 1490 aaPredicted RBP21.4■■□□□ 1.02
ABCA1-203ENST00000423487 INSRP06213 1382 aa21.4■■□□□ 1.02
ABCA1-203ENST00000423487 ARHGEF25Q86VW2 580 aa21.39■■□□□ 1.02
ABCA1-203ENST00000423487 PHRF1Q9P1Y6 1649 aaKnown RBP21.39■■□□□ 1.02
ABCA1-203ENST00000423487 FLT4P35916 1363 aa21.39■■□□□ 1.01
ABCA1-203ENST00000423487 HSPA1LP34931 641 aa21.39■■□□□ 1.01
ABCA1-203ENST00000423487 ZC3H6P61129 1189 aaKnown RBP21.39■■□□□ 1.01
ABCA1-203ENST00000423487 COL22A1Q8NFW1 1626 aaPredicted RBP21.39■■□□□ 1.01
ABCA1-203ENST00000423487 RTL1A6NKG5 1358 aa21.38■■□□□ 1.01
ABCA1-203ENST00000423487 JCADQ9P266 1359 aa21.38■■□□□ 1.01
ABCA1-203ENST00000423487 CRYBG1Q9Y4K1 1723 aa21.38■■□□□ 1.01
ABCA1-203ENST00000423487 ZBTB7CA1YPR0 619 aa21.37■■□□□ 1.01
ABCA1-203ENST00000423487 CPDO75976 1380 aa21.37■■□□□ 1.01
ABCA1-203ENST00000423487 PNISRQ8TF01 805 aaKnown RBP21.36■■□□□ 1.01
ABCA1-203ENST00000423487 DIAPH1O60610 1272 aaKnown RBP21.35■■□□□ 1.01
ABCA1-203ENST00000423487 HOXC9P31274 260 aa21.35■■□□□ 1.01
ABCA1-203ENST00000423487 IP6K1Q92551 441 aa21.35■■□□□ 1.01
ABCA1-203ENST00000423487 HSP90AB2PQ58FF8 381 aa21.34■■□□□ 1.01
ABCA1-203ENST00000423487 NUDCQ9Y266 331 aa21.34■■□□□ 1.01
ABCA1-203ENST00000423487 KIAA0232Q92628 1395 aa21.34■■□□□ 1.01
ABCA1-203ENST00000423487 COL3A1P02461 1466 aaPredicted RBP21.34■■□□□ 1.01
ABCA1-203ENST00000423487 PEAK1Q9H792 1746 aa21.33■■□□□ 1.01
ABCA1-203ENST00000423487 WDR43Q15061 677 aaKnown RBP eCLIP21.33■■□□□ 1
ABCA1-203ENST00000423487 PRDM11Q9NQV5 511 aa21.33■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms