RNA–Protein interactions for RNA: ENST00000422863.1

HLA-DQA1-204, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

Gene HLA-DQA1, Length 520 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-204ENST00000422863 RGPD8O14715 1765 aaPredicted RBP11.56□□□□□ -0.56
HLA-DQA1-204ENST00000422863 ROBO2Q9HCK4 1378 aa11.56□□□□□ -0.56
HLA-DQA1-204ENST00000422863 NEXMIFQ5QGS0 1516 aa11.56□□□□□ -0.56
HLA-DQA1-204ENST00000422863 ITGAEP38570 1179 aa11.56□□□□□ -0.56
HLA-DQA1-204ENST00000422863 CLTCL1P53675 1640 aa11.56□□□□□ -0.56
HLA-DQA1-204ENST00000422863 RALGAPBQ86X10 1494 aa11.56□□□□□ -0.56
HLA-DQA1-204ENST00000422863 UNC5CLQ8IV45 518 aa11.55□□□□□ -0.56
HLA-DQA1-204ENST00000422863 SEPT12Q8IYM1 358 aa11.55□□□□□ -0.56
HLA-DQA1-204ENST00000422863 HRCP23327 699 aa11.54□□□□□ -0.56
HLA-DQA1-204ENST00000422863 CCDC9Q9Y3X0 531 aaKnown RBP11.54□□□□□ -0.56
HLA-DQA1-204ENST00000422863 PXDNQ92626 1479 aa11.53□□□□□ -0.56
HLA-DQA1-204ENST00000422863 MMRN1Q13201 1228 aa11.53□□□□□ -0.56
HLA-DQA1-204ENST00000422863 BMP2KQ9NSY1 1161 aaPredicted RBP11.53□□□□□ -0.56
HLA-DQA1-204ENST00000422863 NPHP3Q7Z494 1330 aa11.53□□□□□ -0.56
HLA-DQA1-204ENST00000422863 PLCH1Q4KWH8 1693 aa11.52□□□□□ -0.57
HLA-DQA1-204ENST00000422863 SLIT2O94813 1529 aa11.51□□□□□ -0.57
HLA-DQA1-204ENST00000422863 EN1Q05925 392 aaPredicted RBP11.51□□□□□ -0.57
HLA-DQA1-204ENST00000422863 KRT27Q7Z3Y8 459 aa11.51□□□□□ -0.57
HLA-DQA1-204ENST00000422863 CABLES1Q8TDN4 633 aa11.51□□□□□ -0.57
HLA-DQA1-204ENST00000422863 A0A0G2JS52 829 aa11.5□□□□□ -0.57
HLA-DQA1-204ENST00000422863 MYT1Q01538 1121 aa11.5□□□□□ -0.57
HLA-DQA1-204ENST00000422863 R3HDM1Q15032 1099 aaKnown RBP11.5□□□□□ -0.57
HLA-DQA1-204ENST00000422863 USP32Q8NFA0 1604 aa11.49□□□□□ -0.57
HLA-DQA1-204ENST00000422863 BAG6P46379 1132 aa11.49□□□□□ -0.57
HLA-DQA1-204ENST00000422863 HAP1P54257 671 aaPredicted RBP11.49□□□□□ -0.57
HLA-DQA1-204ENST00000422863 FAM182BQ5T319 152 aa11.49□□□□□ -0.57
HLA-DQA1-204ENST00000422863 WAPLQ7Z5K2 1190 aa11.49□□□□□ -0.57
HLA-DQA1-204ENST00000422863 CCDC61Q9Y6R9 512 aa11.49□□□□□ -0.57
HLA-DQA1-204ENST00000422863 PPLO60437 1756 aa11.49□□□□□ -0.57
HLA-DQA1-204ENST00000422863 STK26Q9P289 416 aa11.48□□□□□ -0.57
HLA-DQA1-204ENST00000422863 COLQQ9Y215 455 aaPredicted RBP11.48□□□□□ -0.57
HLA-DQA1-204ENST00000422863 NWD2Q9ULI1 1742 aa11.48□□□□□ -0.57
HLA-DQA1-204ENST00000422863 RGPD1P0DJD0 1748 aa11.47□□□□□ -0.57
HLA-DQA1-204ENST00000422863 HFM1A2PYH4 1435 aa11.47□□□□□ -0.57
HLA-DQA1-204ENST00000422863 SPATA31A3Q5VYP0 1347 aa11.47□□□□□ -0.57
HLA-DQA1-204ENST00000422863 VGFO15240 615 aaPredicted RBP11.47□□□□□ -0.57
HLA-DQA1-204ENST00000422863 ST18O60284 1047 aa11.47□□□□□ -0.57
HLA-DQA1-204ENST00000422863 VPS72Q15906 364 aa11.47□□□□□ -0.57
HLA-DQA1-204ENST00000422863 LMOD2Q6P5Q4 547 aa11.47□□□□□ -0.57
HLA-DQA1-204ENST00000422863 KRT28Q7Z3Y7 464 aa11.47□□□□□ -0.57
HLA-DQA1-204ENST00000422863 SPNS2Q8IVW8 549 aa11.47□□□□□ -0.57
HLA-DQA1-204ENST00000422863 KIF12Q96FN5 646 aa11.47□□□□□ -0.57
HLA-DQA1-204ENST00000422863 TSPYL2Q9H2G4 693 aaPredicted RBP11.47□□□□□ -0.57
HLA-DQA1-204ENST00000422863 TRPC6Q9Y210 931 aa11.47□□□□□ -0.57
HLA-DQA1-204ENST00000422863 ABCA3Q99758 1704 aa11.46□□□□□ -0.57
HLA-DQA1-204ENST00000422863 ROCK1Q13464 1354 aa11.46□□□□□ -0.57
HLA-DQA1-204ENST00000422863 YY1P25490 414 aa11.46□□□□□ -0.57
HLA-DQA1-204ENST00000422863 FAM98CQ17RN3 349 aaKnown RBP11.46□□□□□ -0.57
HLA-DQA1-204ENST00000422863 FMN2Q9NZ56 1722 aa11.46□□□□□ -0.58
HLA-DQA1-204ENST00000422863 CDC42BPGQ6DT37 1551 aa11.45□□□□□ -0.58
HLA-DQA1-204ENST00000422863 NAIPQ13075 1403 aa11.45□□□□□ -0.58
HLA-DQA1-204ENST00000422863 LRPPRCP42704 1394 aaKnown RBP11.45□□□□□ -0.58
HLA-DQA1-204ENST00000422863 ONECUT3O60422 494 aaPredicted RBP11.45□□□□□ -0.58
HLA-DQA1-204ENST00000422863 TNS1Q9HBL0 1735 aaKnown RBP11.44□□□□□ -0.58
HLA-DQA1-204ENST00000422863 TIE1P35590 1138 aa11.44□□□□□ -0.58
HLA-DQA1-204ENST00000422863 EZH2Q15910 746 aaKnown RBP11.44□□□□□ -0.58
HLA-DQA1-204ENST00000422863 IFT172Q9UG01 1749 aa11.43□□□□□ -0.58
HLA-DQA1-204ENST00000422863 FAM83GA6ND36 823 aa11.43□□□□□ -0.58
HLA-DQA1-204ENST00000422863 PPARGC1BQ86YN6 1023 aaKnown RBP11.43□□□□□ -0.58
HLA-DQA1-204ENST00000422863 NRAPQ86VF7 1730 aa11.43□□□□□ -0.58
HLA-DQA1-204ENST00000422863 KIF1AQ12756 1690 aa11.43□□□□□ -0.58
HLA-DQA1-204ENST00000422863 PLEKHH1Q9ULM0 1364 aa11.42□□□□□ -0.58
HLA-DQA1-204ENST00000422863 SEC24BO95487 1268 aa11.42□□□□□ -0.58
HLA-DQA1-204ENST00000422863 TMEM132EQ6IEE7 984 aa11.42□□□□□ -0.58
HLA-DQA1-204ENST00000422863 SPDYE4A6NLX3 237 aa11.41□□□□□ -0.58
HLA-DQA1-204ENST00000422863 BTG4Q9NY30 223 aa11.4□□□□□ -0.58
HLA-DQA1-204ENST00000422863 ADGRF5Q8IZF2 1346 aa11.39□□□□□ -0.59
HLA-DQA1-204ENST00000422863 PRAG1Q86YV5 1406 aa11.39□□□□□ -0.59
HLA-DQA1-204ENST00000422863 PHF8Q9UPP1 1060 aa11.39□□□□□ -0.59
HLA-DQA1-204ENST00000422863 RPGRIP1LQ68CZ1 1315 aa11.38□□□□□ -0.59
HLA-DQA1-204ENST00000422863 KNDC1Q76NI1 1749 aa11.38□□□□□ -0.59
HLA-DQA1-204ENST00000422863 CCDC144AA2RUR9 1427 aa11.38□□□□□ -0.59
HLA-DQA1-204ENST00000422863 TNS3Q68CZ2 1445 aa11.38□□□□□ -0.59
HLA-DQA1-204ENST00000422863 TRIM37O94972 964 aa11.38□□□□□ -0.59
HLA-DQA1-204ENST00000422863 PSME1Q06323 249 aa11.38□□□□□ -0.59
HLA-DQA1-204ENST00000422863 RGL3Q3MIN7 710 aa11.38□□□□□ -0.59
HLA-DQA1-204ENST00000422863 SLAIN1Q8ND83 568 aa11.38□□□□□ -0.59
HLA-DQA1-204ENST00000422863 PMFBP1Q8TBY8 1022 aa11.38□□□□□ -0.59
HLA-DQA1-204ENST00000422863 CAMTA1Q9Y6Y1 1673 aa11.38□□□□□ -0.59
HLA-DQA1-204ENST00000422863 SAFB2Q14151 953 aaKnown RBP eCLIP11.36□□□□□ -0.59
HLA-DQA1-204ENST00000422863 CAMKK2Q96RR4 588 aa11.36□□□□□ -0.59
HLA-DQA1-204ENST00000422863 COL14A1Q05707 1796 aaKnown RBP11.36□□□□□ -0.59
HLA-DQA1-204ENST00000422863 NUP188Q5SRE5 1749 aa11.35□□□□□ -0.59
HLA-DQA1-204ENST00000422863 TTLL13PA6NNM8 815 aa11.35□□□□□ -0.59
HLA-DQA1-204ENST00000422863 MAP3K13O43283 966 aa11.35□□□□□ -0.59
HLA-DQA1-204ENST00000422863 APBA3O96018 575 aa11.35□□□□□ -0.59
HLA-DQA1-204ENST00000422863 RREB1Q92766 1687 aa11.34□□□□□ -0.59
HLA-DQA1-204ENST00000422863 PPP1R1BQ9UD71 204 aaPredicted RBP11.34□□□□□ -0.59
HLA-DQA1-204ENST00000422863 TRPM3Q9HCF6 1732 aaPredicted RBP11.34□□□□□ -0.59
HLA-DQA1-204ENST00000422863 THSD7AQ9UPZ6 1657 aa11.33□□□□□ -0.6
HLA-DQA1-204ENST00000422863 IER5LQ5T953 404 aa11.33□□□□□ -0.6
HLA-DQA1-204ENST00000422863 SPATA31A5Q5VU36 1347 aa11.33□□□□□ -0.6
HLA-DQA1-204ENST00000422863 SPATA31A7Q8IWB4 1347 aa11.33□□□□□ -0.6
HLA-DQA1-204ENST00000422863 UTRNP46939 3433 aa11.32□□□□□ -0.6
HLA-DQA1-204ENST00000422863 SBNO1A3KN83 1393 aa11.32□□□□□ -0.6
HLA-DQA1-204ENST00000422863 ABCC11Q96J66 1382 aa11.32□□□□□ -0.6
HLA-DQA1-204ENST00000422863 ALS2Q96Q42 1657 aa11.32□□□□□ -0.6
HLA-DQA1-204ENST00000422863 TECPR2O15040 1411 aa11.32□□□□□ -0.6
HLA-DQA1-204ENST00000422863 YTHDC2Q9H6S0 1430 aaKnown RBP11.32□□□□□ -0.6
HLA-DQA1-204ENST00000422863 RRBP1Q9P2E9 1410 aaKnown RBP11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms