RNA–Protein interactions for RNA: ENST00000422806.1

NKX1-1-201, Transcript of NK1 homeobox 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NKX1-1, Length 1,236 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX1-1-201ENST00000422806 ITSN1Q15811 1721 aa41.13■■■■■ 4.17
NKX1-1-201ENST00000422806 ABCA3Q99758 1704 aa41.13■■■■■ 4.17
NKX1-1-201ENST00000422806 NWD2Q9ULI1 1742 aa41.11■■■■■ 4.17
NKX1-1-201ENST00000422806 VPS72Q15906 364 aa41.11■■■■■ 4.17
NKX1-1-201ENST00000422806 PLCH1Q4KWH8 1693 aa41.07■■■■■ 4.17
NKX1-1-201ENST00000422806 CABP2Q9NPB3 220 aa41.07■■■■■ 4.17
NKX1-1-201ENST00000422806 TRPM3Q9HCF6 1732 aaPredicted RBP41.06■■■■■ 4.16
NKX1-1-201ENST00000422806 QRICH2Q9H0J4 1663 aa41.05■■■■■ 4.16
NKX1-1-201ENST00000422806 ACEP12821 1306 aa41.04■■■■■ 4.16
NKX1-1-201ENST00000422806 PLEKHG3A1L390 1219 aa41.03■■■■■ 4.16
NKX1-1-201ENST00000422806 BLMP54132 1417 aaPredicted RBP41.01■■■■■ 4.15
NKX1-1-201ENST00000422806 ZRANB1Q9UGI0 708 aa41■■■■■ 4.15
NKX1-1-201ENST00000422806 EVC2Q86UK5 1308 aa40.99■■■■■ 4.15
NKX1-1-201ENST00000422806 ALS2Q96Q42 1657 aa40.99■■■■■ 4.15
NKX1-1-201ENST00000422806 SEPT12Q8IYM1 358 aa40.99■■■■■ 4.15
NKX1-1-201ENST00000422806 CARD11Q9BXL7 1154 aa40.99■■■■■ 4.15
NKX1-1-201ENST00000422806 FAM83GA6ND36 823 aa40.98■■■■■ 4.15
NKX1-1-201ENST00000422806 ONECUT3O60422 494 aaPredicted RBP40.98■■■■■ 4.15
NKX1-1-201ENST00000422806 CCDC9Q9Y3X0 531 aaKnown RBP40.98■■■■■ 4.15
NKX1-1-201ENST00000422806 POLR3AO14802 1390 aaPredicted RBP40.98■■■■■ 4.15
NKX1-1-201ENST00000422806 SRCAPQ6ZRS2 3230 aa40.97■■■■■ 4.15
NKX1-1-201ENST00000422806 PPIP5K1Q6PFW1 1433 aa40.96■■■■■ 4.15
NKX1-1-201ENST00000422806 TOPAZ1Q8N9V7 1692 aa40.95■■■■■ 4.15
NKX1-1-201ENST00000422806 BRWD3Q6RI45 1802 aa40.93■■■■■ 4.14
NKX1-1-201ENST00000422806 CABP1Q9NZU7 370 aa40.91■■■■■ 4.14
NKX1-1-201ENST00000422806 NRAPQ86VF7 1730 aa40.9■■■■■ 4.14
NKX1-1-201ENST00000422806 COL14A1Q05707 1796 aaKnown RBP40.89■■■■■ 4.14
NKX1-1-201ENST00000422806 NUTM2GQ5VZR2 741 aa40.89■■■■■ 4.14
NKX1-1-201ENST00000422806 PCGF6Q9BYE7 350 aa40.88■■■■■ 4.13
NKX1-1-201ENST00000422806 KRT27Q7Z3Y8 459 aa40.87■■■■■ 4.13
NKX1-1-201ENST00000422806 BTG4Q9NY30 223 aa40.87■■■■■ 4.13
NKX1-1-201ENST00000422806 ABTB2Q8N961 1025 aa40.86■■■■■ 4.13
NKX1-1-201ENST00000422806 SF3B2Q13435 895 aaKnown RBP40.85■■■■■ 4.13
NKX1-1-201ENST00000422806 CRYBG1Q9Y4K1 1723 aa40.82■■■■■ 4.13
NKX1-1-201ENST00000422806 A0A0G2JS52 829 aa40.79■■■■■ 4.12
NKX1-1-201ENST00000422806 MYT1Q01538 1121 aa40.79■■■■■ 4.12
NKX1-1-201ENST00000422806 PRDM11Q9NQV5 511 aa40.79■■■■■ 4.12
NKX1-1-201ENST00000422806 FAM98CQ17RN3 349 aaKnown RBP40.77■■■■■ 4.12
NKX1-1-201ENST00000422806 DEFB132Q7Z7B7 95 aa40.76■■■■■ 4.12
NKX1-1-201ENST00000422806 BRD4O60885 1362 aaPredicted RBP40.74■■■■■ 4.11
NKX1-1-201ENST00000422806 SPATA31A5Q5VU36 1347 aa40.74■■■■■ 4.11
NKX1-1-201ENST00000422806 SPATA31A7Q8IWB4 1347 aa40.74■■■■■ 4.11
NKX1-1-201ENST00000422806 ZC3H6P61129 1189 aaKnown RBP40.74■■■■■ 4.11
NKX1-1-201ENST00000422806 NLRP13Q86W25 1043 aa40.74■■■■■ 4.11
NKX1-1-201ENST00000422806 SBNO2Q9Y2G9 1366 aa40.73■■■■■ 4.11
NKX1-1-201ENST00000422806 ZNF692Q9BU19 519 aaPredicted RBP40.71■■■■■ 4.11
NKX1-1-201ENST00000422806 KIAA0232Q92628 1395 aa40.71■■■■■ 4.11
NKX1-1-201ENST00000422806 USP6P35125 1406 aa40.7■■■■■ 4.11
NKX1-1-201ENST00000422806 CHRNA2Q15822 529 aa40.69■■■■■ 4.1
NKX1-1-201ENST00000422806 PHRF1Q9P1Y6 1649 aaKnown RBP40.67■■■■■ 4.1
NKX1-1-201ENST00000422806 NLRP6P59044 892 aa40.66■■■■■ 4.1
NKX1-1-201ENST00000422806 CLSPNQ9HAW4 1339 aa40.66■■■■■ 4.1
NKX1-1-201ENST00000422806 THSD7AQ9UPZ6 1657 aa40.63■■■■■ 4.1
NKX1-1-201ENST00000422806 BAG6P46379 1132 aa40.63■■■■■ 4.09
NKX1-1-201ENST00000422806 USP19O94966 1318 aa40.63■■■■■ 4.09
NKX1-1-201ENST00000422806 GCP02774 474 aa40.61■■■■■ 4.09
NKX1-1-201ENST00000422806 TMC1Q8TDI8 760 aa40.61■■■■■ 4.09
NKX1-1-201ENST00000422806 ST20-MTHFSA0A0A6YYL1 179 aa40.6■■■■■ 4.09
NKX1-1-201ENST00000422806 TIMELESSQ9UNS1 1208 aa40.6■■■■■ 4.09
NKX1-1-201ENST00000422806 SPATA31A1Q5TZJ5 1347 aa40.6■■■■■ 4.09
NKX1-1-201ENST00000422806 STRN4Q9NRL3 753 aa40.59■■■■■ 4.09
NKX1-1-201ENST00000422806 EVA1CP58658 441 aa40.57■■■■■ 4.09
NKX1-1-201ENST00000422806 TTC21BQ7Z4L5 1316 aa40.57■■■■■ 4.08
NKX1-1-201ENST00000422806 SSH2Q76I76 1423 aa40.57■■■■■ 4.08
NKX1-1-201ENST00000422806 KTN1Q86UP2 1357 aaKnown RBP40.56■■■■■ 4.08
NKX1-1-201ENST00000422806 SLC24A1O60721 1099 aa40.55■■■■■ 4.08
NKX1-1-201ENST00000422806 NRKQ7Z2Y5 1582 aa40.54■■■■■ 4.08
NKX1-1-201ENST00000422806 RGPD1P0DJD0 1748 aa40.53■■■■■ 4.08
NKX1-1-201ENST00000422806 ZBTB7CA1YPR0 619 aa40.53■■■■■ 4.08
NKX1-1-201ENST00000422806 CCER1Q8TC90 406 aaPredicted RBP40.53■■■■■ 4.08
NKX1-1-201ENST00000422806 CPSF1Q10570 1443 aaKnown RBP40.52■■■■■ 4.08
NKX1-1-201ENST00000422806 CPDO75976 1380 aa40.52■■■■■ 4.08
NKX1-1-201ENST00000422806 TTC21AQ8NDW8 1320 aa40.52■■■■■ 4.08
NKX1-1-201ENST00000422806 AKAP12Q02952 1782 aa40.52■■■■■ 4.08
NKX1-1-201ENST00000422806 PUS7Q96PZ0 661 aaKnown RBP40.51■■■■■ 4.08
NKX1-1-201ENST00000422806 TESK2Q96S53 571 aa40.51■■■■■ 4.08
NKX1-1-201ENST00000422806 HDGFL2Q7Z4V5 671 aaPredicted RBP40.5■■■■■ 4.07
NKX1-1-201ENST00000422806 SLC12A5Q9H2X9 1139 aa40.5■■■■■ 4.07
NKX1-1-201ENST00000422806 DISP2A7MBM2 1401 aa40.5■■■■■ 4.07
NKX1-1-201ENST00000422806 FAM182BQ5T319 152 aa40.47■■■■■ 4.07
NKX1-1-201ENST00000422806 SUGP2Q8IX01 1082 aaKnown RBP eCLIP40.46■■■■■ 4.07
NKX1-1-201ENST00000422806 TERF2IPQ9NYB0 399 aa40.45■■■■■ 4.07
NKX1-1-201ENST00000422806 PIK3C2AO00443 1686 aa40.45■■■■■ 4.07
NKX1-1-201ENST00000422806 USP47Q96K76 1375 aa40.45■■■■■ 4.07
NKX1-1-201ENST00000422806 BARGINQ6ZT62 677 aa40.44■■■■■ 4.06
NKX1-1-201ENST00000422806 USP35Q9P2H5 1018 aa40.43■■■■■ 4.06
NKX1-1-201ENST00000422806 EN1Q05925 392 aaPredicted RBP40.42■■■■■ 4.06
NKX1-1-201ENST00000422806 FAM196AQ6ZSG2 479 aa40.42■■■■■ 4.06
NKX1-1-201ENST00000422806 KCNH5Q8NCM2 988 aa40.42■■■■■ 4.06
NKX1-1-201ENST00000422806 LMO7Q8WWI1 1683 aa40.42■■■■■ 4.06
NKX1-1-201ENST00000422806 CAMTA1Q9Y6Y1 1673 aa40.42■■■■■ 4.06
NKX1-1-201ENST00000422806 LRP5O75197 1615 aa40.42■■■■■ 4.06
NKX1-1-201ENST00000422806 SOX12O15370 315 aa40.41■■■■■ 4.06
NKX1-1-201ENST00000422806 SLIT3O75094 1523 aa40.4■■■■■ 4.06
NKX1-1-201ENST00000422806 TNS1Q9HBL0 1735 aaKnown RBP40.39■■■■■ 4.06
NKX1-1-201ENST00000422806 TMF1P82094 1093 aa40.39■■■■■ 4.06
NKX1-1-201ENST00000422806 LARP1Q6PKG0 1096 aaKnown RBP40.39■■■■■ 4.06
NKX1-1-201ENST00000422806 MON2Q7Z3U7 1717 aa40.37■■■■■ 4.05
NKX1-1-201ENST00000422806 CD163L1Q9NR16 1453 aa40.37■■■■■ 4.05
NKX1-1-201ENST00000422806 TCP11L2Q8N4U5 519 aa40.36■■■■■ 4.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms