RNA–Protein interactions for RNA: ENST00000422622.3

SSPN-202, Transcript of sarcospan, humanhuman

TSL 2 BASIC

Gene SSPN, Length 4,348 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSPN-202ENST00000422622 USHBP1Q8N6Y0 703 aa12.83□□□□□ -0.36
SSPN-202ENST00000422622 HSP90AB2PQ58FF8 381 aa12.82□□□□□ -0.36
SSPN-202ENST00000422622 DUSP27Q5VZP5 1158 aa12.82□□□□□ -0.36
SSPN-202ENST00000422622 SLFN5Q08AF3 891 aa12.82□□□□□ -0.36
SSPN-202ENST00000422622 TULP1O00294 542 aaPredicted RBP12.82□□□□□ -0.36
SSPN-202ENST00000422622 POLKQ9UBT6 870 aa12.82□□□□□ -0.36
SSPN-202ENST00000422622 FAM83GA6ND36 823 aa12.81□□□□□ -0.36
SSPN-202ENST00000422622 APBB1O00213 710 aa12.81□□□□□ -0.36
SSPN-202ENST00000422622 TMPOP42166 694 aaKnown RBP12.81□□□□□ -0.36
SSPN-202ENST00000422622 ZNF692Q9BU19 519 aaPredicted RBP12.81□□□□□ -0.36
SSPN-202ENST00000422622 MIS18AQ9NYP9 233 aa12.81□□□□□ -0.36
SSPN-202ENST00000422622 LRPPRCP42704 1394 aaKnown RBP12.81□□□□□ -0.36
SSPN-202ENST00000422622 ARHGAP31Q2M1Z3 1444 aa12.81□□□□□ -0.36
SSPN-202ENST00000422622 AEBP1Q8IUX7 1158 aa12.81□□□□□ -0.36
SSPN-202ENST00000422622 A2ML1A8K2U0 1454 aa12.81□□□□□ -0.36
SSPN-202ENST00000422622 CAMSAP1Q5T5Y3 1602 aa12.81□□□□□ -0.36
SSPN-202ENST00000422622 ADGRB3O60242 1522 aa12.81□□□□□ -0.36
SSPN-202ENST00000422622 ATF3P18847 181 aa12.8□□□□□ -0.36
SSPN-202ENST00000422622 NAP1L5Q96NT1 182 aaPredicted RBP12.8□□□□□ -0.36
SSPN-202ENST00000422622 ROBO2Q9HCK4 1378 aa12.8□□□□□ -0.36
SSPN-202ENST00000422622 ZC3H6P61129 1189 aaKnown RBP12.8□□□□□ -0.36
SSPN-202ENST00000422622 TPRNQ4KMQ1 711 aa12.8□□□□□ -0.36
SSPN-202ENST00000422622 TRIM44Q96DX7 344 aaPredicted RBP12.8□□□□□ -0.36
SSPN-202ENST00000422622 DNAJC5Q9H3Z4 198 aa12.8□□□□□ -0.36
SSPN-202ENST00000422622 ZNF428Q96B54 188 aa12.79□□□□□ -0.36
SSPN-202ENST00000422622 DDRGK1Q96HY6 314 aa12.79□□□□□ -0.36
SSPN-202ENST00000422622 CLTCQ00610 1675 aaKnown RBP12.79□□□□□ -0.36
SSPN-202ENST00000422622 LMTK2Q8IWU2 1503 aa12.79□□□□□ -0.36
SSPN-202ENST00000422622 DDX17Q92841 729 aaKnown RBP12.79□□□□□ -0.36
SSPN-202ENST00000422622 MCM10Q7L590 875 aa12.78□□□□□ -0.36
SSPN-202ENST00000422622 MROH2AA6NES4 1674 aa12.78□□□□□ -0.36
SSPN-202ENST00000422622 SYNMO15061 1565 aa12.78□□□□□ -0.36
SSPN-202ENST00000422622 TTC21BQ7Z4L5 1316 aa12.78□□□□□ -0.36
SSPN-202ENST00000422622 VWDEQ8N2E2 1590 aa12.78□□□□□ -0.36
SSPN-202ENST00000422622 PHACTR3Q96KR7 559 aa12.78□□□□□ -0.36
SSPN-202ENST00000422622 PODXL2Q9NZ53 605 aa12.78□□□□□ -0.36
SSPN-202ENST00000422622 PRR36Q9H6K5 1346 aa12.78□□□□□ -0.36
SSPN-202ENST00000422622 PHF8Q9UPP1 1060 aa12.78□□□□□ -0.36
SSPN-202ENST00000422622 TNNQ9UQP3 1299 aa12.78□□□□□ -0.36
SSPN-202ENST00000422622 SLC4A10Q6U841 1118 aa12.77□□□□□ -0.36
SSPN-202ENST00000422622 ERICH6BQ5W0A0 696 aa12.77□□□□□ -0.37
SSPN-202ENST00000422622 DEPDC5O75140 1603 aa12.77□□□□□ -0.37
SSPN-202ENST00000422622 ORAI2Q96SN7 254 aa12.76□□□□□ -0.37
SSPN-202ENST00000422622 TBX22Q9Y458 520 aa12.76□□□□□ -0.37
SSPN-202ENST00000422622 NCLP19338 710 aaKnown RBP12.76□□□□□ -0.37
SSPN-202ENST00000422622 USP35Q9P2H5 1018 aa12.76□□□□□ -0.37
SSPN-202ENST00000422622 GLI2P10070 1586 aa12.76□□□□□ -0.37
SSPN-202ENST00000422622 ABCC11Q96J66 1382 aa12.75□□□□□ -0.37
SSPN-202ENST00000422622 RICTORQ6R327 1708 aa12.75□□□□□ -0.37
SSPN-202ENST00000422622 BECN1Q14457 450 aa12.75□□□□□ -0.37
SSPN-202ENST00000422622 SPRYD3Q8NCJ5 442 aa12.74□□□□□ -0.37
SSPN-202ENST00000422622 SBNO2Q9Y2G9 1366 aa12.74□□□□□ -0.37
SSPN-202ENST00000422622 KDM5AP29375 1690 aaKnown RBP12.74□□□□□ -0.37
SSPN-202ENST00000422622 NEXMIFQ5QGS0 1516 aa12.73□□□□□ -0.37
SSPN-202ENST00000422622 EIF2S2P20042 333 aaKnown RBP12.73□□□□□ -0.37
SSPN-202ENST00000422622 PIK3C2BO00750 1634 aa12.73□□□□□ -0.37
SSPN-202ENST00000422622 FCHSD2O94868 740 aa12.73□□□□□ -0.37
SSPN-202ENST00000422622 ZKSCAN2Q63HK3 967 aa12.73□□□□□ -0.37
SSPN-202ENST00000422622 CABLES1Q8TDN4 633 aa12.73□□□□□ -0.37
SSPN-202ENST00000422622 NLRP2Q9NX02 1062 aa12.73□□□□□ -0.37
SSPN-202ENST00000422622 POLR3AO14802 1390 aaPredicted RBP12.72□□□□□ -0.37
SSPN-202ENST00000422622 C1orf115Q9H7X2 142 aa12.72□□□□□ -0.37
SSPN-202ENST00000422622 ALKQ9UM73 1620 aa12.72□□□□□ -0.37
SSPN-202ENST00000422622 NOB1Q9ULX3 412 aaKnown RBP12.71□□□□□ -0.37
SSPN-202ENST00000422622 EIF4A2Q14240 407 aaKnown RBP12.71□□□□□ -0.37
SSPN-202ENST00000422622 FANCIQ9NVI1 1328 aa12.71□□□□□ -0.37
SSPN-202ENST00000422622 KRT24Q2M2I5 525 aa12.71□□□□□ -0.37
SSPN-202ENST00000422622 TSPYL4Q9UJ04 414 aa12.71□□□□□ -0.37
SSPN-202ENST00000422622 DZIP1LQ8IYY4 767 aaKnown RBP12.71□□□□□ -0.38
SSPN-202ENST00000422622 CALD1Q05682 793 aaKnown RBP12.7□□□□□ -0.38
SSPN-202ENST00000422622 NFE2L2Q16236 605 aa12.7□□□□□ -0.38
SSPN-202ENST00000422622 SSH1Q8WYL5 1049 aa12.7□□□□□ -0.38
SSPN-202ENST00000422622 IPO8O15397 1037 aaKnown RBP12.7□□□□□ -0.38
SSPN-202ENST00000422622 RARSP54136 660 aaKnown RBP12.7□□□□□ -0.38
SSPN-202ENST00000422622 LMOD3Q0VAK6 560 aa12.7□□□□□ -0.38
SSPN-202ENST00000422622 ZNF330Q9Y3S2 320 aaPredicted RBP12.7□□□□□ -0.38
SSPN-202ENST00000422622 WDR63Q8IWG1 891 aa12.69□□□□□ -0.38
SSPN-202ENST00000422622 SIGLEC1Q9BZZ2 1709 aa12.69□□□□□ -0.38
SSPN-202ENST00000422622 CHRNA2Q15822 529 aa12.69□□□□□ -0.38
SSPN-202ENST00000422622 MAP3K19Q56UN5 1328 aa12.69□□□□□ -0.38
SSPN-202ENST00000422622 PUS7Q96PZ0 661 aaKnown RBP12.69□□□□□ -0.38
SSPN-202ENST00000422622 NSD2O96028 1365 aa12.69□□□□□ -0.38
SSPN-202ENST00000422622 NINLQ9Y2I6 1382 aa12.69□□□□□ -0.38
SSPN-202ENST00000422622 NGEFQ8N5V2 710 aa12.69□□□□□ -0.38
SSPN-202ENST00000422622 LRRC59Q96AG4 307 aaKnown RBP12.69□□□□□ -0.38
SSPN-202ENST00000422622 NPC1L1Q9UHC9 1359 aa12.68□□□□□ -0.38
SSPN-202ENST00000422622 TULP4Q9NRJ4 1543 aa12.68□□□□□ -0.38
SSPN-202ENST00000422622 GNAI1P63096 354 aa12.68□□□□□ -0.38
SSPN-202ENST00000422622 TWISTNBQ3B726 338 aaPredicted RBP12.68□□□□□ -0.38
SSPN-202ENST00000422622 PREX1Q8TCU6 1659 aa12.68□□□□□ -0.38
SSPN-202ENST00000422622 ADGRB1O14514 1584 aa12.67□□□□□ -0.38
SSPN-202ENST00000422622 ARHGEF40Q8TER5 1519 aa12.67□□□□□ -0.38
SSPN-202ENST00000422622 KRT28Q7Z3Y7 464 aa12.67□□□□□ -0.38
SSPN-202ENST00000422622 ZFYVE9O95405 1425 aa12.67□□□□□ -0.38
SSPN-202ENST00000422622 PLEKHG1Q9ULL1 1385 aa12.66□□□□□ -0.38
SSPN-202ENST00000422622 TEFQ10587 303 aa12.66□□□□□ -0.38
SSPN-202ENST00000422622 TSPYL6Q8N831 410 aa12.66□□□□□ -0.38
SSPN-202ENST00000422622 STRN4Q9NRL3 753 aa12.66□□□□□ -0.38
SSPN-202ENST00000422622 MSH5O43196 834 aa12.66□□□□□ -0.38
SSPN-202ENST00000422622 GZF1Q9H116 711 aaPredicted RBP12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms