RNA–Protein interactions for RNA: ENST00000422508.6

CD109-202, Transcript of CD109 molecule, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CD109, Length 9,221 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD109-202ENST00000422508 CFAP45Q9UL16 551 aa11□□□□□ -0.65
CD109-202ENST00000422508 ZFYVE27Q5T4F4 411 aa11□□□□□ -0.65
CD109-202ENST00000422508 HOOK3Q86VS8 718 aa11□□□□□ -0.65
CD109-202ENST00000422508 CCDC146Q8IYE0 955 aa11□□□□□ -0.65
CD109-202ENST00000422508 CCDC148Q8NFR7 591 aa10.99□□□□□ -0.65
CD109-202ENST00000422508 GCOM1H8Y6P7 765 aaPredicted RBP10.99□□□□□ -0.65
CD109-202ENST00000422508 MYZAPP0CAP1 466 aa10.99□□□□□ -0.65
CD109-202ENST00000422508 CFAP65Q6ZU64 1925 aaKnown RBP10.99□□□□□ -0.65
CD109-202ENST00000422508 C22orf23Q9BZE7 217 aa10.99□□□□□ -0.65
CD109-202ENST00000422508 CIZ1Q9ULV3 898 aaPredicted RBP10.99□□□□□ -0.65
CD109-202ENST00000422508 BRD4O60885 1362 aaPredicted RBP10.99□□□□□ -0.65
CD109-202ENST00000422508 PPP1R12BO60237 982 aaPredicted RBP10.99□□□□□ -0.65
CD109-202ENST00000422508 SRCIN1Q9C0H9 1055 aa10.99□□□□□ -0.65
CD109-202ENST00000422508 SMTNL1A8MU46 457 aa10.99□□□□□ -0.65
CD109-202ENST00000422508 CAVIN2O95810 425 aa10.99□□□□□ -0.65
CD109-202ENST00000422508 TEFQ10587 303 aa10.99□□□□□ -0.65
CD109-202ENST00000422508 CCDC83Q8IWF9 413 aa10.99□□□□□ -0.65
CD109-202ENST00000422508 PDILTQ8N807 584 aa10.98□□□□□ -0.65
CD109-202ENST00000422508 TAOK3Q9H2K8 898 aa10.98□□□□□ -0.65
CD109-202ENST00000422508 FGFR1OPO95684 399 aaKnown RBP10.98□□□□□ -0.65
CD109-202ENST00000422508 GNAI1P63096 354 aa10.98□□□□□ -0.65
CD109-202ENST00000422508 TBC1D2BQ9UPU7 963 aa10.98□□□□□ -0.65
CD109-202ENST00000422508 ZNF330Q9Y3S2 320 aaPredicted RBP10.98□□□□□ -0.65
CD109-202ENST00000422508 WDR33Q9C0J8 1336 aaKnown RBP10.97□□□□□ -0.65
CD109-202ENST00000422508 EFCAB5A4FU69 1503 aa10.97□□□□□ -0.65
CD109-202ENST00000422508 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.97□□□□□ -0.65
CD109-202ENST00000422508 NOL8Q76FK4 1167 aaKnown RBP10.97□□□□□ -0.65
CD109-202ENST00000422508 VPS36Q86VN1 386 aa10.97□□□□□ -0.65
CD109-202ENST00000422508 SIN3AQ96ST3 1273 aa10.97□□□□□ -0.65
CD109-202ENST00000422508 NGDNQ8NEJ9 315 aaKnown RBP10.97□□□□□ -0.65
CD109-202ENST00000422508 VPS37CA5D8V6 355 aaPredicted RBP10.97□□□□□ -0.65
CD109-202ENST00000422508 GOLGA6L9A6NEM1 432 aa10.97□□□□□ -0.65
CD109-202ENST00000422508 KIF21AQ7Z4S6 1674 aa10.97□□□□□ -0.65
CD109-202ENST00000422508 SREK1Q8WXA9 508 aaKnown RBP10.97□□□□□ -0.65
CD109-202ENST00000422508 FYB1O15117 783 aa10.96□□□□□ -0.65
CD109-202ENST00000422508 WASF1Q92558 559 aa10.96□□□□□ -0.65
CD109-202ENST00000422508 NEMFO60524 1076 aa10.96□□□□□ -0.65
CD109-202ENST00000422508 TRIM22Q8IYM9 498 aa10.96□□□□□ -0.65
CD109-202ENST00000422508 CEP131Q9UPN4 1083 aa10.96□□□□□ -0.65
CD109-202ENST00000422508 WASHC2CQ9Y4E1 1318 aa10.96□□□□□ -0.65
CD109-202ENST00000422508 ZSCAN12O43309 604 aa10.96□□□□□ -0.66
CD109-202ENST00000422508 BBXQ8WY36 941 aaPredicted RBP10.96□□□□□ -0.66
CD109-202ENST00000422508 VGFO15240 615 aaPredicted RBP10.96□□□□□ -0.66
CD109-202ENST00000422508 ERICH3Q5RHP9 1530 aa10.96□□□□□ -0.66
CD109-202ENST00000422508 GNL3LQ9NVN8 582 aaKnown RBP10.95□□□□□ -0.66
CD109-202ENST00000422508 CRACR2AQ9BSW2 395 aa10.95□□□□□ -0.66
CD109-202ENST00000422508 MCM5P33992 734 aa10.95□□□□□ -0.66
CD109-202ENST00000422508 TTLL5Q6EMB2 1281 aa10.95□□□□□ -0.66
CD109-202ENST00000422508 RUNDC1Q96C34 613 aa10.95□□□□□ -0.66
CD109-202ENST00000422508 CEP63Q96MT8 703 aa10.94□□□□□ -0.66
CD109-202ENST00000422508 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.94□□□□□ -0.66
CD109-202ENST00000422508 CGNQ9P2M7 1197 aaKnown RBP10.94□□□□□ -0.66
CD109-202ENST00000422508 ZSCAN25Q6NSZ9 544 aa10.94□□□□□ -0.66
CD109-202ENST00000422508 DAPK1P53355 1430 aa10.94□□□□□ -0.66
CD109-202ENST00000422508 MYOM3Q5VTT5 1437 aa10.94□□□□□ -0.66
CD109-202ENST00000422508 C6orf163Q5TEZ5 329 aa10.94□□□□□ -0.66
CD109-202ENST00000422508 CUL7Q14999 1698 aa10.94□□□□□ -0.66
CD109-202ENST00000422508 SPECC1LQ69YQ0 1117 aa10.94□□□□□ -0.66
CD109-202ENST00000422508 PYM1Q9BRP8 204 aaKnown RBP10.94□□□□□ -0.66
CD109-202ENST00000422508 SMC1AQ14683 1233 aaKnown RBP10.93□□□□□ -0.66
CD109-202ENST00000422508 BMP2KQ9NSY1 1161 aaPredicted RBP10.93□□□□□ -0.66
CD109-202ENST00000422508 EHBP1L1Q8N3D4 1523 aa10.93□□□□□ -0.66
CD109-202ENST00000422508 HMGB3O15347 200 aaKnown RBP10.93□□□□□ -0.66
CD109-202ENST00000422508 EHBP1Q8NDI1 1231 aa10.93□□□□□ -0.66
CD109-202ENST00000422508 GCC1Q96CN9 775 aa10.93□□□□□ -0.66
CD109-202ENST00000422508 MYH10P35580 1976 aa10.93□□□□□ -0.66
CD109-202ENST00000422508 GNAI3P08754 354 aa10.93□□□□□ -0.66
CD109-202ENST00000422508 KRT85P78386 507 aa10.93□□□□□ -0.66
CD109-202ENST00000422508 KRT32Q14532 448 aa10.93□□□□□ -0.66
CD109-202ENST00000422508 MAP2K1Q02750 393 aaPredicted RBP10.92□□□□□ -0.66
CD109-202ENST00000422508 GRIPAP1Q4V328 841 aa10.92□□□□□ -0.66
CD109-202ENST00000422508 PHAXQ9H814 394 aaKnown RBP10.92□□□□□ -0.66
CD109-202ENST00000422508 NOL7Q9UMY1 257 aaKnown RBP10.92□□□□□ -0.66
CD109-202ENST00000422508 SETD1BQ9UPS6 1966 aaKnown RBP10.92□□□□□ -0.66
CD109-202ENST00000422508 FOXD4L1Q9NU39 408 aa10.92□□□□□ -0.66
CD109-202ENST00000422508 FERMT1Q9BQL6 677 aa10.92□□□□□ -0.66
CD109-202ENST00000422508 NAA15Q9BXJ9 866 aaKnown RBP10.92□□□□□ -0.66
CD109-202ENST00000422508 SERPINC1P01008 464 aa10.92□□□□□ -0.66
CD109-202ENST00000422508 CEP57L1Q8IYX8 460 aa10.92□□□□□ -0.66
CD109-202ENST00000422508 CCDC57Q2TAC2 916 aa10.92□□□□□ -0.66
CD109-202ENST00000422508 CTR9Q6PD62 1173 aa10.92□□□□□ -0.66
CD109-202ENST00000422508 TRAK2O60296 914 aa10.91□□□□□ -0.66
CD109-202ENST00000422508 ZNF287Q9HBT7 754 aa10.91□□□□□ -0.66
CD109-202ENST00000422508 SETSIPP0DME0 302 aa10.91□□□□□ -0.66
CD109-202ENST00000422508 PLCD4Q9BRC7 762 aa10.91□□□□□ -0.66
CD109-202ENST00000422508 FOXD4L5Q5VV16 416 aaPredicted RBP10.91□□□□□ -0.66
CD109-202ENST00000422508 FOXD4L4Q8WXT5 416 aaPredicted RBP10.91□□□□□ -0.66
CD109-202ENST00000422508 TNMDQ9H2S6 317 aa10.91□□□□□ -0.66
CD109-202ENST00000422508 TMCO3Q6UWJ1 677 aa10.91□□□□□ -0.66
CD109-202ENST00000422508 TUBB4AP04350 444 aa10.91□□□□□ -0.66
CD109-202ENST00000422508 IVLP07476 585 aa10.91□□□□□ -0.66
CD109-202ENST00000422508 ZNF428Q96B54 188 aa10.91□□□□□ -0.66
CD109-202ENST00000422508 NACAP1Q9BZK3 213 aa10.91□□□□□ -0.66
CD109-202ENST00000422508 TAF4BQ92750 862 aa10.91□□□□□ -0.66
CD109-202ENST00000422508 STK26Q9P289 416 aa10.91□□□□□ -0.66
CD109-202ENST00000422508 CTAGE5O15320 804 aa10.9□□□□□ -0.66
CD109-202ENST00000422508 SOX12O15370 315 aa10.9□□□□□ -0.66
CD109-202ENST00000422508 KRT18P05783 430 aaKnown RBP10.9□□□□□ -0.66
CD109-202ENST00000422508 KIAA1328Q86T90 577 aa10.9□□□□□ -0.66
CD109-202ENST00000422508 CLUAP1Q96AJ1 413 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms