RNA–Protein interactions for RNA: ENST00000422392.6

CDH1-202, Transcript of cadherin 1, humanhuman

TSL 1 (best) BASIC

Gene CDH1, Length 2,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-202ENST00000422392 COL3A1P02461 1466 aaPredicted RBP20.14■□□□□ 0.81
CDH1-202ENST00000422392 PTPRMP28827 1452 aa20.13■□□□□ 0.81
CDH1-202ENST00000422392 ITPRIPQ8IWB1 547 aa20.13■□□□□ 0.81
CDH1-202ENST00000422392 FBXO31Q5XUX0 539 aaPredicted RBP20.12■□□□□ 0.81
CDH1-202ENST00000422392 CD163L1Q9NR16 1453 aa20.12■□□□□ 0.81
CDH1-202ENST00000422392 RIPK4P57078 832 aa20.12■□□□□ 0.81
CDH1-202ENST00000422392 BECN1Q14457 450 aa20.11■□□□□ 0.81
CDH1-202ENST00000422392 TBC1D32Q96NH3 1257 aa20.11■□□□□ 0.81
CDH1-202ENST00000422392 NOB1Q9ULX3 412 aaKnown RBP20.11■□□□□ 0.81
CDH1-202ENST00000422392 RICTORQ6R327 1708 aa20.1■□□□□ 0.81
CDH1-202ENST00000422392 UPF2Q9HAU5 1272 aaKnown RBP20.1■□□□□ 0.81
CDH1-202ENST00000422392 SLC52A1Q9NWF4 448 aa20.1■□□□□ 0.81
CDH1-202ENST00000422392 TERF2IPQ9NYB0 399 aa20.1■□□□□ 0.81
CDH1-202ENST00000422392 TMEM131LA2VDJ0 1609 aa20.1■□□□□ 0.81
CDH1-202ENST00000422392 PREX1Q8TCU6 1659 aa20.1■□□□□ 0.81
CDH1-202ENST00000422392 NEO1Q92859 1461 aa20.09■□□□□ 0.81
CDH1-202ENST00000422392 ANKRD26Q9UPS8 1709 aa20.09■□□□□ 0.81
CDH1-202ENST00000422392 ARHGAP31Q2M1Z3 1444 aa20.09■□□□□ 0.81
CDH1-202ENST00000422392 SPRYD3Q8NCJ5 442 aa20.09■□□□□ 0.81
CDH1-202ENST00000422392 CABP1Q9NZU7 370 aa20.09■□□□□ 0.81
CDH1-202ENST00000422392 YTHDC2Q9H6S0 1430 aaKnown RBP20.09■□□□□ 0.81
CDH1-202ENST00000422392 NCBP3Q53F19 620 aaKnown RBP20.08■□□□□ 0.81
CDH1-202ENST00000422392 DIAPH1O60610 1272 aaKnown RBP20.08■□□□□ 0.8
CDH1-202ENST00000422392 ATF7IPQ6VMQ6 1270 aa20.08■□□□□ 0.8
CDH1-202ENST00000422392 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.08■□□□□ 0.8
CDH1-202ENST00000422392 CDK19Q9BWU1 502 aa20.08■□□□□ 0.8
CDH1-202ENST00000422392 ATAD2Q6PL18 1390 aa20.08■□□□□ 0.8
CDH1-202ENST00000422392 TMEM57Q8N5G2 664 aa20.07■□□□□ 0.8
CDH1-202ENST00000422392 TBC1D2Q9BYX2 928 aa20.07■□□□□ 0.8
CDH1-202ENST00000422392 ZFYVE9O95405 1425 aa20.07■□□□□ 0.8
CDH1-202ENST00000422392 CT47B1P0C2W7 299 aaPredicted RBP20.06■□□□□ 0.8
CDH1-202ENST00000422392 DDX19BQ9UMR2 479 aa20.05■□□□□ 0.8
CDH1-202ENST00000422392 MFAP1P55081 439 aaKnown RBP20.04■□□□□ 0.8
CDH1-202ENST00000422392 HDGFL2Q7Z4V5 671 aaPredicted RBP20.04■□□□□ 0.8
CDH1-202ENST00000422392 ANTXR1Q9H6X2 564 aa20.04■□□□□ 0.8
CDH1-202ENST00000422392 CLTCQ00610 1675 aaKnown RBP20.03■□□□□ 0.8
CDH1-202ENST00000422392 KIF20BQ96Q89 1820 aa20.03■□□□□ 0.8
CDH1-202ENST00000422392 WAPLQ7Z5K2 1190 aa20.03■□□□□ 0.8
CDH1-202ENST00000422392 STAG3Q9UJ98 1225 aa20.03■□□□□ 0.8
CDH1-202ENST00000422392 ALKQ9UM73 1620 aa20.02■□□□□ 0.8
CDH1-202ENST00000422392 THUMPD2Q9BTF0 503 aaKnown RBP20.02■□□□□ 0.8
CDH1-202ENST00000422392 ZMYM3Q14202 1370 aa20.02■□□□□ 0.8
CDH1-202ENST00000422392 LRRC7Q96NW7 1537 aa20.02■□□□□ 0.79
CDH1-202ENST00000422392 HMOX1P09601 288 aa20.01■□□□□ 0.79
CDH1-202ENST00000422392 PRKAR2BP31323 418 aa20.01■□□□□ 0.79
CDH1-202ENST00000422392 HDAC1Q13547 482 aaPredicted RBP20.01■□□□□ 0.79
CDH1-202ENST00000422392 MAP2P11137 1827 aaKnown RBP20.01■□□□□ 0.79
CDH1-202ENST00000422392 ZBTB40Q9NUA8 1239 aa20■□□□□ 0.79
CDH1-202ENST00000422392 PNPLA6Q8IY17 1366 aa20■□□□□ 0.79
CDH1-202ENST00000422392 IL16Q14005 1332 aa20■□□□□ 0.79
CDH1-202ENST00000422392 ARHGEF40Q8TER5 1519 aa20■□□□□ 0.79
CDH1-202ENST00000422392 C22orf23Q9BZE7 217 aa19.99■□□□□ 0.79
CDH1-202ENST00000422392 MED14O60244 1454 aa19.99■□□□□ 0.79
CDH1-202ENST00000422392 PHACTR3Q96KR7 559 aa19.99■□□□□ 0.79
CDH1-202ENST00000422392 POLKQ9UBT6 870 aa19.98■□□□□ 0.79
CDH1-202ENST00000422392 SMC5Q8IY18 1101 aa19.98■□□□□ 0.79
CDH1-202ENST00000422392 RSPH6AQ9H0K4 717 aa19.98■□□□□ 0.79
CDH1-202ENST00000422392 LNPKQ9C0E8 428 aa19.97■□□□□ 0.79
CDH1-202ENST00000422392 FCHSD2O94868 740 aa19.96■□□□□ 0.79
CDH1-202ENST00000422392 ANO8Q9HCE9 1232 aaPredicted RBP19.96■□□□□ 0.79
CDH1-202ENST00000422392 KIF16BQ96L93 1317 aa19.96■□□□□ 0.79
CDH1-202ENST00000422392 ELL2O00472 640 aaPredicted RBP19.96■□□□□ 0.79
CDH1-202ENST00000422392 EMILIN1Q9Y6C2 1016 aa19.96■□□□□ 0.79
CDH1-202ENST00000422392 C1orf115Q9H7X2 142 aa19.95■□□□□ 0.78
CDH1-202ENST00000422392 ZRANB1Q9UGI0 708 aa19.95■□□□□ 0.78
CDH1-202ENST00000422392 IPO8O15397 1037 aaKnown RBP19.94■□□□□ 0.78
CDH1-202ENST00000422392 TSPYL6Q8N831 410 aa19.94■□□□□ 0.78
CDH1-202ENST00000422392 FAM135BQ49AJ0 1406 aa19.94■□□□□ 0.78
CDH1-202ENST00000422392 PNNQ9H307 717 aaKnown RBP19.93■□□□□ 0.78
CDH1-202ENST00000422392 ALDH1L2Q3SY69 923 aa19.92■□□□□ 0.78
CDH1-202ENST00000422392 ARXQ96QS3 562 aa19.92■□□□□ 0.78
CDH1-202ENST00000422392 NCKAP5LQ9HCH0 1330 aa19.92■□□□□ 0.78
CDH1-202ENST00000422392 NME9Q86XW9 330 aa19.91■□□□□ 0.78
CDH1-202ENST00000422392 NUCB1Q02818 461 aa19.91■□□□□ 0.78
CDH1-202ENST00000422392 MLECQ14165 292 aa19.9■□□□□ 0.78
CDH1-202ENST00000422392 CDC42BPGQ6DT37 1551 aa19.9■□□□□ 0.78
CDH1-202ENST00000422392 VAMP4O75379 141 aa19.9■□□□□ 0.78
CDH1-202ENST00000422392 NFE2L2Q16236 605 aa19.9■□□□□ 0.78
CDH1-202ENST00000422392 TSPOAP1O95153 1857 aa19.89■□□□□ 0.77
CDH1-202ENST00000422392 DLG5Q8TDM6 1919 aa19.89■□□□□ 0.77
CDH1-202ENST00000422392 CHD1LQ86WJ1 897 aa19.89■□□□□ 0.77
CDH1-202ENST00000422392 CYB5RLQ6IPT4 315 aa19.88■□□□□ 0.77
CDH1-202ENST00000422392 RRS1Q15050 365 aaKnown RBP19.88■□□□□ 0.77
CDH1-202ENST00000422392 FAM83GA6ND36 823 aa19.87■□□□□ 0.77
CDH1-202ENST00000422392 ZBTB7BO15156 539 aaPredicted RBP19.87■□□□□ 0.77
CDH1-202ENST00000422392 ANKRD45Q5TZF3 282 aa19.87■□□□□ 0.77
CDH1-202ENST00000422392 MRPL50Q8N5N7 158 aaKnown RBP19.87■□□□□ 0.77
CDH1-202ENST00000422392 MBIPQ9NS73 344 aa19.87■□□□□ 0.77
CDH1-202ENST00000422392 PPIP5K1Q6PFW1 1433 aa19.87■□□□□ 0.77
CDH1-202ENST00000422392 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.87■□□□□ 0.77
CDH1-202ENST00000422392 GZF1Q9H116 711 aaPredicted RBP19.86■□□□□ 0.77
CDH1-202ENST00000422392 IL13P35225 146 aa19.86■□□□□ 0.77
CDH1-202ENST00000422392 A2ML1A8K2U0 1454 aa19.86■□□□□ 0.77
CDH1-202ENST00000422392 ATP7BP35670 1465 aa19.86■□□□□ 0.77
CDH1-202ENST00000422392 RIMBP3CA6NJZ7 1639 aa19.85■□□□□ 0.77
CDH1-202ENST00000422392 RIMBP3BA6NNM3 1639 aa19.85■□□□□ 0.77
CDH1-202ENST00000422392 RIMBP3Q9UFD9 1639 aa19.85■□□□□ 0.77
CDH1-202ENST00000422392 SETD1AO15047 1707 aaKnown RBP19.85■□□□□ 0.77
CDH1-202ENST00000422392 DCTN1Q14203 1278 aa19.85■□□□□ 0.77
CDH1-202ENST00000422392 TXNDC2Q86VQ3 553 aa19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms