RNA–Protein interactions for RNA: ENST00000422074.2

LINC00397-201, long intergenic non-protein coding RNA 397, humanhuman

TSL 3 BASIC

Gene LINC00397, Length 344 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-201ENST00000422074 MRGPRX2Q96LB1 330 aa9.54□□□□□ -0.88
LINC00397-201ENST00000422074 MAP10Q9P2G4 905 aa9.54□□□□□ -0.88
LINC00397-201ENST00000422074 CTDSPL2Q05D32 466 aa9.53□□□□□ -0.88
LINC00397-201ENST00000422074 SNIP1Q8TAD8 396 aaKnown RBP9.53□□□□□ -0.88
LINC00397-201ENST00000422074 BAP1Q92560 729 aa9.53□□□□□ -0.88
LINC00397-201ENST00000422074 PCMTD1Q96MG8 357 aaPredicted RBP9.53□□□□□ -0.88
LINC00397-201ENST00000422074 SIAH2O43255 324 aa9.52□□□□□ -0.89
LINC00397-201ENST00000422074 CTHP32929 405 aa9.52□□□□□ -0.89
LINC00397-201ENST00000422074 CYP4X1Q8N118 509 aa9.52□□□□□ -0.89
LINC00397-201ENST00000422074 ZNF511Q8NB15 262 aa9.52□□□□□ -0.89
LINC00397-201ENST00000422074 TSC1Q92574 1164 aa9.52□□□□□ -0.89
LINC00397-201ENST00000422074 AVPP01185 164 aa9.51□□□□□ -0.89
LINC00397-201ENST00000422074 RFC5P40937 340 aa9.5□□□□□ -0.89
LINC00397-201ENST00000422074 MYT1Q01538 1121 aa9.5□□□□□ -0.89
LINC00397-201ENST00000422074 PKDCCQ504Y2 493 aa9.5□□□□□ -0.89
LINC00397-201ENST00000422074 MPNDQ8N594 471 aa9.5□□□□□ -0.89
LINC00397-201ENST00000422074 FAM187AA6NFU0 413 aa9.49□□□□□ -0.89
LINC00397-201ENST00000422074 SMPD1P17405 629 aa9.49□□□□□ -0.89
LINC00397-201ENST00000422074 CRIPAKQ8N1N5 446 aa9.49□□□□□ -0.89
LINC00397-201ENST00000422074 ARMC2Q8NEN0 867 aa9.49□□□□□ -0.89
LINC00397-201ENST00000422074 VARSP26640 1264 aaKnown RBP9.48□□□□□ -0.89
LINC00397-201ENST00000422074 LINC01559Q495D7 138 aa9.48□□□□□ -0.89
LINC00397-201ENST00000422074 EHBP1Q8NDI1 1231 aa9.48□□□□□ -0.89
LINC00397-201ENST00000422074 TTC24A2A3L6 582 aaPredicted RBP9.47□□□□□ -0.89
LINC00397-201ENST00000422074 LRRN4Q8WUT4 740 aa9.47□□□□□ -0.89
LINC00397-201ENST00000422074 TMEM259Q4ZIN3 620 aa9.46□□□□□ -0.9
LINC00397-201ENST00000422074 GPKOWQ92917 476 aaPredicted RBP eCLIP9.46□□□□□ -0.9
LINC00397-201ENST00000422074 AP1G2O75843 785 aa9.45□□□□□ -0.9
LINC00397-201ENST00000422074 SMCPP49901 116 aaPredicted RBP9.45□□□□□ -0.9
LINC00397-201ENST00000422074 ATP1B4Q9UN42 357 aaPredicted RBP9.45□□□□□ -0.9
LINC00397-201ENST00000422074 J3QL48 77 aa9.44□□□□□ -0.9
LINC00397-201ENST00000422074 USP17L8P0C7I0 530 aa9.44□□□□□ -0.9
LINC00397-201ENST00000422074 NBPF14Q5TI25 921 aa9.44□□□□□ -0.9
LINC00397-201ENST00000422074 SH3RF1Q7Z6J0 888 aa9.44□□□□□ -0.9
LINC00397-201ENST00000422074 FOXJ1Q92949 421 aa9.44□□□□□ -0.9
LINC00397-201ENST00000422074 ZC3H4Q9UPT8 1303 aaKnown RBP9.43□□□□□ -0.9
LINC00397-201ENST00000422074 CTC1Q2NKJ3 1217 aa9.43□□□□□ -0.9
LINC00397-201ENST00000422074 C4orf48Q5BLP8 95 aa9.42□□□□□ -0.9
LINC00397-201ENST00000422074 SH3BP5LQ7L8J4 393 aa9.42□□□□□ -0.9
LINC00397-201ENST00000422074 BPHLQ86WA6 291 aaPredicted RBP9.42□□□□□ -0.9
LINC00397-201ENST00000422074 C1QTNF2Q9BXJ5 285 aa9.42□□□□□ -0.9
LINC00397-201ENST00000422074 AAASQ9NRG9 546 aa9.42□□□□□ -0.9
LINC00397-201ENST00000422074 FKBPLQ9UIM3 349 aa9.42□□□□□ -0.9
LINC00397-201ENST00000422074 SOCS7O14512 581 aa9.41□□□□□ -0.9
LINC00397-201ENST00000422074 ALDH1A1P00352 501 aa9.41□□□□□ -0.9
LINC00397-201ENST00000422074 NR6A1Q15406 480 aa9.41□□□□□ -0.9
LINC00397-201ENST00000422074 PDXDC2PQ6P474 469 aa9.41□□□□□ -0.9
LINC00397-201ENST00000422074 FAM174AQ8TBP5 190 aa9.41□□□□□ -0.9
LINC00397-201ENST00000422074 CDK15Q96Q40 435 aa9.41□□□□□ -0.9
LINC00397-201ENST00000422074 BANK1Q8NDB2 785 aa9.4□□□□□ -0.9
LINC00397-201ENST00000422074 HMX1Q9NP08 348 aaPredicted RBP9.4□□□□□ -0.9
LINC00397-201ENST00000422074 TRMT44Q8IYL2 757 aaKnown RBP9.38□□□□□ -0.91
LINC00397-201ENST00000422074 HPS1Q92902 700 aa9.38□□□□□ -0.91
LINC00397-201ENST00000422074 TRIM34Q9BYJ4 488 aa9.38□□□□□ -0.91
LINC00397-201ENST00000422074 GPSM3Q9Y4H4 160 aa9.38□□□□□ -0.91
LINC00397-201ENST00000422074 ST8SIA5O15466 376 aa9.37□□□□□ -0.91
LINC00397-201ENST00000422074 EPS8L1Q8TE68 723 aa9.37□□□□□ -0.91
LINC00397-201ENST00000422074 GJD4Q96KN9 370 aaPredicted RBP9.37□□□□□ -0.91
LINC00397-201ENST00000422074 AXIN1O15169 862 aa9.36□□□□□ -0.91
LINC00397-201ENST00000422074 TLL2Q9Y6L7 1015 aa9.36□□□□□ -0.91
LINC00397-201ENST00000422074 PNMA1Q8ND90 353 aa9.35□□□□□ -0.91
LINC00397-201ENST00000422074 OCSTAMPQ9BR26 566 aa9.35□□□□□ -0.91
LINC00397-201ENST00000422074 MAP4K5Q9Y4K4 846 aa9.35□□□□□ -0.91
LINC00397-201ENST00000422074 WASF2Q9Y6W5 498 aa9.35□□□□□ -0.91
LINC00397-201ENST00000422074 ADH1CP00326 375 aa9.34□□□□□ -0.91
LINC00397-201ENST00000422074 GRM5P41594 1212 aa9.34□□□□□ -0.91
LINC00397-201ENST00000422074 AGERQ15109 404 aa9.34□□□□□ -0.91
LINC00397-201ENST00000422074 ERFEQ4G0M1 354 aa9.33□□□□□ -0.92
LINC00397-201ENST00000422074 PTK2Q05397 1052 aa9.32□□□□□ -0.92
LINC00397-201ENST00000422074 NR5A1Q13285 461 aa9.32□□□□□ -0.92
LINC00397-201ENST00000422074 ARHGAP9Q9BRR9 750 aa9.32□□□□□ -0.92
LINC00397-201ENST00000422074 KLF16Q9BXK1 252 aaPredicted RBP9.32□□□□□ -0.92
LINC00397-201ENST00000422074 DACH1Q9UI36 760 aa9.32□□□□□ -0.92
LINC00397-201ENST00000422074 NNTQ13423 1086 aa9.31□□□□□ -0.92
LINC00397-201ENST00000422074 MAGEB6P1A0A0J9YX57 407 aa9.3□□□□□ -0.92
LINC00397-201ENST00000422074 ZNF787Q6DD87 383 aa9.3□□□□□ -0.92
LINC00397-201ENST00000422074 MTMR14Q8NCE2 650 aa9.3□□□□□ -0.92
LINC00397-201ENST00000422074 POTECB2RU33 542 aa9.29□□□□□ -0.92
LINC00397-201ENST00000422074 CDV3Q9UKY7 258 aaKnown RBP9.29□□□□□ -0.92
LINC00397-201ENST00000422074 GPR37L1O60883 481 aa9.28□□□□□ -0.92
LINC00397-201ENST00000422074 CARD14Q9BXL6 1004 aa9.28□□□□□ -0.92
LINC00397-201ENST00000422074 ATP13A2Q9NQ11 1180 aa9.28□□□□□ -0.92
LINC00397-201ENST00000422074 SNRKQ9NRH2 765 aa9.28□□□□□ -0.92
LINC00397-201ENST00000422074 CAPN5O15484 640 aaPredicted RBP9.27□□□□□ -0.93
LINC00397-201ENST00000422074 NR3C2P08235 984 aa9.27□□□□□ -0.93
LINC00397-201ENST00000422074 TIMP2P16035 220 aa9.27□□□□□ -0.93
LINC00397-201ENST00000422074 ARID5BQ14865 1188 aa9.27□□□□□ -0.93
LINC00397-201ENST00000422074 ZBTB33Q86T24 672 aa9.27□□□□□ -0.93
LINC00397-201ENST00000422074 VASH1Q7L8A9 365 aaPredicted RBP9.26□□□□□ -0.93
LINC00397-201ENST00000422074 ADAM32Q8TC27 787 aa9.26□□□□□ -0.93
LINC00397-201ENST00000422074 APBB1O00213 710 aa9.25□□□□□ -0.93
LINC00397-201ENST00000422074 GMPR2Q9P2T1 348 aaKnown RBP9.24□□□□□ -0.93
LINC00397-201ENST00000422074 NDUFB9Q9Y6M9 179 aa9.24□□□□□ -0.93
LINC00397-201ENST00000422074 ZBBXA8MT70 800 aa9.23□□□□□ -0.93
LINC00397-201ENST00000422074 FSHRP23945 695 aa9.23□□□□□ -0.93
LINC00397-201ENST00000422074 WDR4P57081 412 aaKnown RBP9.23□□□□□ -0.93
LINC00397-201ENST00000422074 SLC10A4Q96EP9 437 aa9.23□□□□□ -0.93
LINC00397-201ENST00000422074 KCTD15Q96SI1 283 aaPredicted RBP9.23□□□□□ -0.93
LINC00397-201ENST00000422074 TRIM46Q7Z4K8 759 aa9.22□□□□□ -0.93
LINC00397-201ENST00000422074 TRIM47Q96LD4 638 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms