RNA–Protein interactions for RNA: ENST00000421756.5

MCF2L-213, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best) BASIC

Gene MCF2L, Length 3,560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-213ENST00000421756 POLKQ9UBT6 870 aa16.98■□□□□ 0.31
MCF2L-213ENST00000421756 MYOM1P52179 1685 aa16.98■□□□□ 0.31
MCF2L-213ENST00000421756 MVPQ14764 893 aaKnown RBP16.98■□□□□ 0.31
MCF2L-213ENST00000421756 UPF2Q9HAU5 1272 aaKnown RBP16.97■□□□□ 0.31
MCF2L-213ENST00000421756 ABCC3O15438 1527 aa16.97■□□□□ 0.31
MCF2L-213ENST00000421756 NECTIN2Q92692 538 aa16.97■□□□□ 0.31
MCF2L-213ENST00000421756 FRMPD1Q5SYB0 1578 aa16.96■□□□□ 0.31
MCF2L-213ENST00000421756 AEBP1Q8IUX7 1158 aa16.96■□□□□ 0.31
MCF2L-213ENST00000421756 LTV1Q96GA3 475 aaPredicted RBP16.96■□□□□ 0.31
MCF2L-213ENST00000421756 TSPOAP1O95153 1857 aa16.95■□□□□ 0.3
MCF2L-213ENST00000421756 VWDEQ8N2E2 1590 aa16.94■□□□□ 0.3
MCF2L-213ENST00000421756 NUDT16Q96DE0 195 aaKnown RBP16.94■□□□□ 0.3
MCF2L-213ENST00000421756 DEPDC5O75140 1603 aa16.94■□□□□ 0.3
MCF2L-213ENST00000421756 ATF7IPQ6VMQ6 1270 aa16.94■□□□□ 0.3
MCF2L-213ENST00000421756 GZF1Q9H116 711 aaPredicted RBP16.94■□□□□ 0.3
MCF2L-213ENST00000421756 YTHDC2Q9H6S0 1430 aaKnown RBP16.94■□□□□ 0.3
MCF2L-213ENST00000421756 MLH3Q9UHC1 1453 aa16.94■□□□□ 0.3
MCF2L-213ENST00000421756 ARAP3Q8WWN8 1544 aa16.94■□□□□ 0.3
MCF2L-213ENST00000421756 ANKRD45Q5TZF3 282 aa16.93■□□□□ 0.3
MCF2L-213ENST00000421756 COG3Q96JB2 828 aa16.93■□□□□ 0.3
MCF2L-213ENST00000421756 ADGRB3O60242 1522 aa16.93■□□□□ 0.3
MCF2L-213ENST00000421756 PLEKHF1Q96S99 279 aa16.93■□□□□ 0.3
MCF2L-213ENST00000421756 ATAD2Q6PL18 1390 aa16.93■□□□□ 0.3
MCF2L-213ENST00000421756 MCM10Q7L590 875 aa16.92■□□□□ 0.3
MCF2L-213ENST00000421756 SULT6B1Q6IMI4 303 aa16.92■□□□□ 0.3
MCF2L-213ENST00000421756 ZNF428Q96B54 188 aa16.92■□□□□ 0.3
MCF2L-213ENST00000421756 TULP4Q9NRJ4 1543 aa16.92■□□□□ 0.3
MCF2L-213ENST00000421756 BRPF3Q9ULD4 1205 aa16.92■□□□□ 0.3
MCF2L-213ENST00000421756 SBNO2Q9Y2G9 1366 aa16.91■□□□□ 0.3
MCF2L-213ENST00000421756 HECW2Q9P2P5 1572 aa16.91■□□□□ 0.3
MCF2L-213ENST00000421756 ADGRB1O14514 1584 aa16.9■□□□□ 0.3
MCF2L-213ENST00000421756 QRICH2Q9H0J4 1663 aa16.9■□□□□ 0.3
MCF2L-213ENST00000421756 WASLO00401 505 aaPredicted RBP16.89■□□□□ 0.29
MCF2L-213ENST00000421756 GLI2P10070 1586 aa16.88■□□□□ 0.29
MCF2L-213ENST00000421756 SLC4A10Q6U841 1118 aa16.88■□□□□ 0.29
MCF2L-213ENST00000421756 C8orf58Q8NAV2 365 aa16.88■□□□□ 0.29
MCF2L-213ENST00000421756 HSP90AB2PQ58FF8 381 aa16.88■□□□□ 0.29
MCF2L-213ENST00000421756 METP08581 1390 aa16.88■□□□□ 0.29
MCF2L-213ENST00000421756 NGEFQ8N5V2 710 aa16.87■□□□□ 0.29
MCF2L-213ENST00000421756 DDX19BQ9UMR2 479 aa16.87■□□□□ 0.29
MCF2L-213ENST00000421756 ABCC11Q96J66 1382 aa16.87■□□□□ 0.29
MCF2L-213ENST00000421756 MBIPQ9NS73 344 aa16.86■□□□□ 0.29
MCF2L-213ENST00000421756 FOXO3O43524 673 aa16.86■□□□□ 0.29
MCF2L-213ENST00000421756 PHF23Q9BUL5 403 aaPredicted RBP16.86■□□□□ 0.29
MCF2L-213ENST00000421756 RSPH6AQ9H0K4 717 aa16.86■□□□□ 0.29
MCF2L-213ENST00000421756 USP19O94966 1318 aa16.85■□□□□ 0.29
MCF2L-213ENST00000421756 SIGLEC1Q9BZZ2 1709 aa16.85■□□□□ 0.29
MCF2L-213ENST00000421756 BECN1Q14457 450 aa16.85■□□□□ 0.29
MCF2L-213ENST00000421756 TWISTNBQ3B726 338 aaPredicted RBP16.85■□□□□ 0.29
MCF2L-213ENST00000421756 NRXN1Q9ULB1 1477 aa16.85■□□□□ 0.29
MCF2L-213ENST00000421756 IPO8O15397 1037 aaKnown RBP16.85■□□□□ 0.29
MCF2L-213ENST00000421756 TRHP20396 242 aaPredicted RBP16.85■□□□□ 0.29
MCF2L-213ENST00000421756 CCDC61Q9Y6R9 512 aa16.85■□□□□ 0.29
MCF2L-213ENST00000421756 FCHSD2O94868 740 aa16.84■□□□□ 0.29
MCF2L-213ENST00000421756 LMOD2Q6P5Q4 547 aa16.84■□□□□ 0.29
MCF2L-213ENST00000421756 NGDNQ8NEJ9 315 aaKnown RBP16.84■□□□□ 0.29
MCF2L-213ENST00000421756 CAMSAP1Q5T5Y3 1602 aa16.83■□□□□ 0.29
MCF2L-213ENST00000421756 GSE1Q14687 1217 aa16.83■□□□□ 0.29
MCF2L-213ENST00000421756 NFE2L2Q16236 605 aa16.83■□□□□ 0.28
MCF2L-213ENST00000421756 CCDC27Q2M243 656 aa16.83■□□□□ 0.28
MCF2L-213ENST00000421756 RIMS2Q9UQ26 1411 aa16.83■□□□□ 0.28
MCF2L-213ENST00000421756 HSP90AA1P07900 732 aaKnown RBP16.83■□□□□ 0.28
MCF2L-213ENST00000421756 NEXMIFQ5QGS0 1516 aa16.82■□□□□ 0.28
MCF2L-213ENST00000421756 PPIP5K1Q6PFW1 1433 aa16.82■□□□□ 0.28
MCF2L-213ENST00000421756 TBC1D2Q9BYX2 928 aa16.82■□□□□ 0.28
MCF2L-213ENST00000421756 C22orf23Q9BZE7 217 aa16.82■□□□□ 0.28
MCF2L-213ENST00000421756 DIP2CQ9Y2E4 1556 aa16.81■□□□□ 0.28
MCF2L-213ENST00000421756 LTKP29376 864 aa16.81■□□□□ 0.28
MCF2L-213ENST00000421756 PNNQ9H307 717 aaKnown RBP16.8■□□□□ 0.28
MCF2L-213ENST00000421756 VAMP4O75379 141 aa16.8■□□□□ 0.28
MCF2L-213ENST00000421756 LMTK2Q8IWU2 1503 aa16.8■□□□□ 0.28
MCF2L-213ENST00000421756 F6X3S4 739 aa16.79■□□□□ 0.28
MCF2L-213ENST00000421756 C16orf71Q8IYS4 520 aaPredicted RBP16.79■□□□□ 0.28
MCF2L-213ENST00000421756 ACEP12821 1306 aa16.79■□□□□ 0.28
MCF2L-213ENST00000421756 PRR36Q9H6K5 1346 aa16.79■□□□□ 0.28
MCF2L-213ENST00000421756 PPLO60437 1756 aa16.79■□□□□ 0.28
MCF2L-213ENST00000421756 SMARCA5O60264 1052 aaPredicted RBP16.79■□□□□ 0.28
MCF2L-213ENST00000421756 USHBP1Q8N6Y0 703 aa16.79■□□□□ 0.28
MCF2L-213ENST00000421756 NEO1Q92859 1461 aa16.79■□□□□ 0.28
MCF2L-213ENST00000421756 IL13P35225 146 aa16.78■□□□□ 0.28
MCF2L-213ENST00000421756 AMPHP49418 695 aa16.78■□□□□ 0.28
MCF2L-213ENST00000421756 MYO5BQ9ULV0 1848 aa16.78■□□□□ 0.28
MCF2L-213ENST00000421756 ZBTB40Q9NUA8 1239 aa16.78■□□□□ 0.28
MCF2L-213ENST00000421756 ZMYM3Q14202 1370 aa16.78■□□□□ 0.28
MCF2L-213ENST00000421756 PIK3C2BO00750 1634 aa16.78■□□□□ 0.28
MCF2L-213ENST00000421756 RBM42Q9BTD8 480 aaKnown RBP16.77■□□□□ 0.28
MCF2L-213ENST00000421756 KIF16BQ96L93 1317 aa16.77■□□□□ 0.28
MCF2L-213ENST00000421756 XPCQ01831 940 aaPredicted RBP16.77■□□□□ 0.28
MCF2L-213ENST00000421756 NSD2O96028 1365 aa16.77■□□□□ 0.27
MCF2L-213ENST00000421756 GNAI1P63096 354 aa16.77■□□□□ 0.27
MCF2L-213ENST00000421756 EIF4A2Q14240 407 aaKnown RBP16.77■□□□□ 0.27
MCF2L-213ENST00000421756 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.77■□□□□ 0.27
MCF2L-213ENST00000421756 PTPRMP28827 1452 aa16.76■□□□□ 0.27
MCF2L-213ENST00000421756 TPRNQ4KMQ1 711 aa16.76■□□□□ 0.27
MCF2L-213ENST00000421756 TSHZ3Q63HK5 1081 aa16.76■□□□□ 0.27
MCF2L-213ENST00000421756 KIAA1210Q9ULL0 1709 aa16.75■□□□□ 0.27
MCF2L-213ENST00000421756 CHD1LQ86WJ1 897 aa16.75■□□□□ 0.27
MCF2L-213ENST00000421756 NLRP6P59044 892 aa16.75■□□□□ 0.27
MCF2L-213ENST00000421756 TBC1D32Q96NH3 1257 aa16.74■□□□□ 0.27
MCF2L-213ENST00000421756 OTUD7AQ8TE49 926 aaPredicted RBP16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms