RNA–Protein interactions for RNA: ENST00000421704.5

LINC00472-202, long intergenic non-protein coding RNA 472, humanhuman

TSL 2

Gene LINC00472, Length 451 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00472-202ENST00000421704 TTC21BQ7Z4L5 1316 aa20.29■□□□□ 0.84
LINC00472-202ENST00000421704 KIF1AQ12756 1690 aa20.29■□□□□ 0.84
LINC00472-202ENST00000421704 SSH2Q76I76 1423 aa20.29■□□□□ 0.84
LINC00472-202ENST00000421704 STRCQ7RTU9 1775 aa20.29■□□□□ 0.84
LINC00472-202ENST00000421704 MTHFSP49914 203 aa20.29■□□□□ 0.84
LINC00472-202ENST00000421704 C14orf37Q86TY3 774 aa20.29■□□□□ 0.84
LINC00472-202ENST00000421704 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.28■□□□□ 0.84
LINC00472-202ENST00000421704 PNNQ9H307 717 aaKnown RBP20.28■□□□□ 0.84
LINC00472-202ENST00000421704 C19orf44Q9H6X5 657 aa20.28■□□□□ 0.84
LINC00472-202ENST00000421704 SHPRHQ149N8 1683 aa20.28■□□□□ 0.84
LINC00472-202ENST00000421704 USP54Q70EL1 1684 aa20.28■□□□□ 0.84
LINC00472-202ENST00000421704 SMG6Q86US8 1419 aaKnown RBP20.27■□□□□ 0.84
LINC00472-202ENST00000421704 ADAMTS8Q9UP79 889 aa20.27■□□□□ 0.84
LINC00472-202ENST00000421704 NCBP3Q53F19 620 aaKnown RBP20.26■□□□□ 0.83
LINC00472-202ENST00000421704 USP31Q70CQ4 1352 aa20.25■□□□□ 0.83
LINC00472-202ENST00000421704 PNPLA6Q8IY17 1366 aa20.25■□□□□ 0.83
LINC00472-202ENST00000421704 PHF8Q9UPP1 1060 aa20.25■□□□□ 0.83
LINC00472-202ENST00000421704 OVOS2A0A0J9YW53 1432 aa20.25■□□□□ 0.83
LINC00472-202ENST00000421704 OVOS2Q6IE36 1432 aa20.25■□□□□ 0.83
LINC00472-202ENST00000421704 TNNT2P45379 298 aaPredicted RBP20.24■□□□□ 0.83
LINC00472-202ENST00000421704 CDK12Q9NYV4 1490 aaPredicted RBP20.24■□□□□ 0.83
LINC00472-202ENST00000421704 HSPA2P54652 639 aa20.23■□□□□ 0.83
LINC00472-202ENST00000421704 NUTM2FA1L443 756 aa20.22■□□□□ 0.83
LINC00472-202ENST00000421704 NME9Q86XW9 330 aa20.22■□□□□ 0.83
LINC00472-202ENST00000421704 MAP2P11137 1827 aaKnown RBP20.21■□□□□ 0.83
LINC00472-202ENST00000421704 STRCP1A6NGW2 1772 aa20.21■□□□□ 0.83
LINC00472-202ENST00000421704 COL3A1P02461 1466 aaPredicted RBP20.2■□□□□ 0.82
LINC00472-202ENST00000421704 ATF3P18847 181 aa20.2■□□□□ 0.82
LINC00472-202ENST00000421704 CADPS2Q86UW7 1296 aa20.2■□□□□ 0.82
LINC00472-202ENST00000421704 PMFBP1Q8TBY8 1022 aa20.2■□□□□ 0.82
LINC00472-202ENST00000421704 MSH6P52701 1360 aa20.2■□□□□ 0.82
LINC00472-202ENST00000421704 KIF24Q5T7B8 1368 aa20.2■□□□□ 0.82
LINC00472-202ENST00000421704 DIAPH1O60610 1272 aaKnown RBP20.19■□□□□ 0.82
LINC00472-202ENST00000421704 TMEM94Q12767 1356 aa20.19■□□□□ 0.82
LINC00472-202ENST00000421704 RUNDC1Q96C34 613 aa20.18■□□□□ 0.82
LINC00472-202ENST00000421704 POLKQ9UBT6 870 aa20.18■□□□□ 0.82
LINC00472-202ENST00000421704 PIK3C2AO00443 1686 aa20.17■□□□□ 0.82
LINC00472-202ENST00000421704 ESCO1Q5FWF5 840 aa20.17■□□□□ 0.82
LINC00472-202ENST00000421704 C1orf167Q5SNV9 1468 aa20.17■□□□□ 0.82
LINC00472-202ENST00000421704 GTF3C3Q9Y5Q9 886 aa20.15■□□□□ 0.82
LINC00472-202ENST00000421704 NEFLP07196 543 aa20.14■□□□□ 0.81
LINC00472-202ENST00000421704 PSME1Q06323 249 aa20.14■□□□□ 0.81
LINC00472-202ENST00000421704 MST1RQ04912 1400 aa20.13■□□□□ 0.81
LINC00472-202ENST00000421704 NEFMP07197 916 aa20.13■□□□□ 0.81
LINC00472-202ENST00000421704 U2AF1L5P0DN76 240 aaPredicted RBP20.12■□□□□ 0.81
LINC00472-202ENST00000421704 U2AF1Q01081 240 aaKnown RBP eCLIP20.12■□□□□ 0.81
LINC00472-202ENST00000421704 FCHSD2O94868 740 aa20.11■□□□□ 0.81
LINC00472-202ENST00000421704 CCDC27Q2M243 656 aa20.1■□□□□ 0.81
LINC00472-202ENST00000421704 KCNH5Q8NCM2 988 aa20.1■□□□□ 0.81
LINC00472-202ENST00000421704 XIRP1Q702N8 1843 aaKnown RBP20.1■□□□□ 0.81
LINC00472-202ENST00000421704 IQSEC2Q5JU85 1478 aa20.1■□□□□ 0.81
LINC00472-202ENST00000421704 SBNO1A3KN83 1393 aa20.09■□□□□ 0.81
LINC00472-202ENST00000421704 NLRP6P59044 892 aa20.09■□□□□ 0.81
LINC00472-202ENST00000421704 ABTB2Q8N961 1025 aa20.09■□□□□ 0.81
LINC00472-202ENST00000421704 RTL1A6NKG5 1358 aa20.08■□□□□ 0.81
LINC00472-202ENST00000421704 MAPK8IP3Q9UPT6 1336 aa20.08■□□□□ 0.81
LINC00472-202ENST00000421704 U2SURPO15042 1029 aaKnown RBP20.08■□□□□ 0.81
LINC00472-202ENST00000421704 RBM33Q96EV2 1170 aaKnown RBP20.08■□□□□ 0.81
LINC00472-202ENST00000421704 FLT4P35916 1363 aa20.08■□□□□ 0.8
LINC00472-202ENST00000421704 TRPM3Q9HCF6 1732 aaPredicted RBP20.07■□□□□ 0.8
LINC00472-202ENST00000421704 ZNF521Q96K83 1311 aa20.07■□□□□ 0.8
LINC00472-202ENST00000421704 APAF1O14727 1248 aa20.07■□□□□ 0.8
LINC00472-202ENST00000421704 PPM1GO15355 546 aaPredicted RBP20.07■□□□□ 0.8
LINC00472-202ENST00000421704 PAK3O75914 559 aaPredicted RBP20.07■□□□□ 0.8
LINC00472-202ENST00000421704 GOLGA2Q08379 1002 aa20.07■□□□□ 0.8
LINC00472-202ENST00000421704 MARF1Q9Y4F3 1742 aaKnown RBP20.07■□□□□ 0.8
LINC00472-202ENST00000421704 NPHP3Q7Z494 1330 aa20.06■□□□□ 0.8
LINC00472-202ENST00000421704 PHRF1Q9P1Y6 1649 aaKnown RBP20.06■□□□□ 0.8
LINC00472-202ENST00000421704 ERICH6BQ5W0A0 696 aa20.06■□□□□ 0.8
LINC00472-202ENST00000421704 ZRANB1Q9UGI0 708 aa20.06■□□□□ 0.8
LINC00472-202ENST00000421704 EMILIN1Q9Y6C2 1016 aa20.06■□□□□ 0.8
LINC00472-202ENST00000421704 CCDC146Q8IYE0 955 aa20.05■□□□□ 0.8
LINC00472-202ENST00000421704 IL13P35225 146 aa20.04■□□□□ 0.8
LINC00472-202ENST00000421704 ORAI2Q96SN7 254 aa20.04■□□□□ 0.8
LINC00472-202ENST00000421704 E9PSI1 815 aa20.03■□□□□ 0.8
LINC00472-202ENST00000421704 WDR63Q8IWG1 891 aa20.03■□□□□ 0.8
LINC00472-202ENST00000421704 TCP11L2Q8N4U5 519 aa20.03■□□□□ 0.8
LINC00472-202ENST00000421704 SLIT3O75094 1523 aa20.02■□□□□ 0.8
LINC00472-202ENST00000421704 RRS1Q15050 365 aaKnown RBP20.02■□□□□ 0.8
LINC00472-202ENST00000421704 KRT28Q7Z3Y7 464 aa20.02■□□□□ 0.8
LINC00472-202ENST00000421704 PLEKHF1Q96S99 279 aa20.02■□□□□ 0.8
LINC00472-202ENST00000421704 ZNF335Q9H4Z2 1342 aaPredicted RBP20.02■□□□□ 0.79
LINC00472-202ENST00000421704 ALS2Q96Q42 1657 aa20.01■□□□□ 0.79
LINC00472-202ENST00000421704 FOXO3O43524 673 aa20.01■□□□□ 0.79
LINC00472-202ENST00000421704 MAP3K19Q56UN5 1328 aa20.01■□□□□ 0.79
LINC00472-202ENST00000421704 PEAK1Q9H792 1746 aa20■□□□□ 0.79
LINC00472-202ENST00000421704 AMPHP49418 695 aa20■□□□□ 0.79
LINC00472-202ENST00000421704 PHF23Q9BUL5 403 aaPredicted RBP20■□□□□ 0.79
LINC00472-202ENST00000421704 SALL2Q9Y467 1007 aaPredicted RBP20■□□□□ 0.79
LINC00472-202ENST00000421704 RGPD1P0DJD0 1748 aa19.99■□□□□ 0.79
LINC00472-202ENST00000421704 ARHGEF10O15013 1369 aa19.98■□□□□ 0.79
LINC00472-202ENST00000421704 NFAT5O94916 1531 aa19.98■□□□□ 0.79
LINC00472-202ENST00000421704 WWC1Q8IX03 1113 aa19.98■□□□□ 0.79
LINC00472-202ENST00000421704 RSPH6AQ9H0K4 717 aa19.98■□□□□ 0.79
LINC00472-202ENST00000421704 SUPT16HQ9Y5B9 1047 aaKnown RBP19.98■□□□□ 0.79
LINC00472-202ENST00000421704 USP19O94966 1318 aa19.98■□□□□ 0.79
LINC00472-202ENST00000421704 LTN1O94822 1766 aa19.98■□□□□ 0.79
LINC00472-202ENST00000421704 CALD1Q05682 793 aaKnown RBP19.97■□□□□ 0.79
LINC00472-202ENST00000421704 SLFN5Q08AF3 891 aa19.97■□□□□ 0.79
LINC00472-202ENST00000421704 LMOD3Q0VAK6 560 aa19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms