RNA–Protein interactions for RNA: ENST00000420717.5

PTPN18-204, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 3

Gene PTPN18, Length 599 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-204ENST00000420717 CABP1Q9NZU7 370 aa20.27■□□□□ 0.84
PTPN18-204ENST00000420717 PHRF1Q9P1Y6 1649 aaKnown RBP20.27■□□□□ 0.83
PTPN18-204ENST00000420717 PIK3C2AO00443 1686 aa20.26■□□□□ 0.83
PTPN18-204ENST00000420717 CDCA8Q53HL2 280 aa20.24■□□□□ 0.83
PTPN18-204ENST00000420717 ZNF692Q9BU19 519 aaPredicted RBP20.23■□□□□ 0.83
PTPN18-204ENST00000420717 HSPA5P11021 654 aaKnown RBP20.22■□□□□ 0.83
PTPN18-204ENST00000420717 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.21■□□□□ 0.83
PTPN18-204ENST00000420717 SLIT3O75094 1523 aa20.21■□□□□ 0.83
PTPN18-204ENST00000420717 A0A1W2PP64 1363 aa20.21■□□□□ 0.83
PTPN18-204ENST00000420717 EDC4Q6P2E9 1401 aaKnown RBP20.2■□□□□ 0.82
PTPN18-204ENST00000420717 USP19O94966 1318 aa20.2■□□□□ 0.82
PTPN18-204ENST00000420717 ANKRD36BQ8N2N9 1353 aa20.2■□□□□ 0.82
PTPN18-204ENST00000420717 TTC21AQ8NDW8 1320 aa20.19■□□□□ 0.82
PTPN18-204ENST00000420717 KTN1Q86UP2 1357 aaKnown RBP20.19■□□□□ 0.82
PTPN18-204ENST00000420717 NWD2Q9ULI1 1742 aa20.19■□□□□ 0.82
PTPN18-204ENST00000420717 PLCH1Q4KWH8 1693 aa20.17■□□□□ 0.82
PTPN18-204ENST00000420717 SLC12A5Q9H2X9 1139 aa20.16■□□□□ 0.82
PTPN18-204ENST00000420717 TERF2IPQ9NYB0 399 aa20.16■□□□□ 0.82
PTPN18-204ENST00000420717 TTC21BQ7Z4L5 1316 aa20.16■□□□□ 0.82
PTPN18-204ENST00000420717 COL14A1Q05707 1796 aaKnown RBP20.16■□□□□ 0.82
PTPN18-204ENST00000420717 NUTM2BA6NNL0 878 aaPredicted RBP20.15■□□□□ 0.82
PTPN18-204ENST00000420717 NUTM2EB1AL46 878 aaPredicted RBP20.15■□□□□ 0.82
PTPN18-204ENST00000420717 NUTM2AQ8IVF1 878 aaPredicted RBP20.15■□□□□ 0.82
PTPN18-204ENST00000420717 RGS17Q9UGC6 210 aaPredicted RBP20.15■□□□□ 0.82
PTPN18-204ENST00000420717 USP31Q70CQ4 1352 aa20.15■□□□□ 0.82
PTPN18-204ENST00000420717 SLIT2O94813 1529 aa20.15■□□□□ 0.82
PTPN18-204ENST00000420717 PAK3O75914 559 aaPredicted RBP20.14■□□□□ 0.81
PTPN18-204ENST00000420717 HDGFL2Q7Z4V5 671 aaPredicted RBP20.14■□□□□ 0.81
PTPN18-204ENST00000420717 NRAPQ86VF7 1730 aa20.13■□□□□ 0.81
PTPN18-204ENST00000420717 CPDO75976 1380 aa20.12■□□□□ 0.81
PTPN18-204ENST00000420717 MEX3CQ5U5Q3 659 aaKnown RBP20.12■□□□□ 0.81
PTPN18-204ENST00000420717 FNBP4Q8N3X1 1017 aaPredicted RBP20.12■□□□□ 0.81
PTPN18-204ENST00000420717 TMC1Q8TDI8 760 aa20.12■□□□□ 0.81
PTPN18-204ENST00000420717 PHF23Q9BUL5 403 aaPredicted RBP20.12■□□□□ 0.81
PTPN18-204ENST00000420717 NFAT5O94916 1531 aa20.12■□□□□ 0.81
PTPN18-204ENST00000420717 OVOS2A0A0J9YW53 1432 aa20.11■□□□□ 0.81
PTPN18-204ENST00000420717 OVOS2Q6IE36 1432 aa20.11■□□□□ 0.81
PTPN18-204ENST00000420717 LMO7Q8WWI1 1683 aa20.11■□□□□ 0.81
PTPN18-204ENST00000420717 LMOD2Q6P5Q4 547 aa20.11■□□□□ 0.81
PTPN18-204ENST00000420717 ABTB2Q8N961 1025 aa20.11■□□□□ 0.81
PTPN18-204ENST00000420717 ABCC6O95255 1503 aa20.11■□□□□ 0.81
PTPN18-204ENST00000420717 KIF20BQ96Q89 1820 aa20.11■□□□□ 0.81
PTPN18-204ENST00000420717 CABLES1Q8TDN4 633 aa20.1■□□□□ 0.81
PTPN18-204ENST00000420717 BCL9LQ86UU0 1499 aa20.1■□□□□ 0.81
PTPN18-204ENST00000420717 AFF2P51816 1311 aa20.09■□□□□ 0.81
PTPN18-204ENST00000420717 ADAMTS2O95450 1211 aa20.09■□□□□ 0.81
PTPN18-204ENST00000420717 ZNF772Q68DY9 489 aaPredicted RBP20.09■□□□□ 0.81
PTPN18-204ENST00000420717 NLRP13Q86W25 1043 aa20.09■□□□□ 0.81
PTPN18-204ENST00000420717 C8orf37Q96NL8 207 aa20.08■□□□□ 0.81
PTPN18-204ENST00000420717 ATRNO75882 1429 aa20.07■□□□□ 0.8
PTPN18-204ENST00000420717 C11orf95C9JLR9 678 aaPredicted RBP20.06■□□□□ 0.8
PTPN18-204ENST00000420717 COL18A1P39060 1754 aa20.06■□□□□ 0.8
PTPN18-204ENST00000420717 CDK12Q9NYV4 1490 aaPredicted RBP20.05■□□□□ 0.8
PTPN18-204ENST00000420717 KIF7Q2M1P5 1343 aa20.04■□□□□ 0.8
PTPN18-204ENST00000420717 HAP1P54257 671 aaPredicted RBP20.04■□□□□ 0.8
PTPN18-204ENST00000420717 NLRP6P59044 892 aa20.04■□□□□ 0.8
PTPN18-204ENST00000420717 NGLY1Q96IV0 654 aa20.04■□□□□ 0.8
PTPN18-204ENST00000420717 KIAA0232Q92628 1395 aa20.04■□□□□ 0.8
PTPN18-204ENST00000420717 ANKRD26Q9UPS8 1709 aa20.04■□□□□ 0.8
PTPN18-204ENST00000420717 GCP02774 474 aa20.03■□□□□ 0.8
PTPN18-204ENST00000420717 NUTM2GQ5VZR2 741 aa20.03■□□□□ 0.8
PTPN18-204ENST00000420717 POTEAQ6S8J7 498 aa20.03■□□□□ 0.8
PTPN18-204ENST00000420717 NSD3Q9BZ95 1437 aa20.02■□□□□ 0.8
PTPN18-204ENST00000420717 NME9Q86XW9 330 aa20.02■□□□□ 0.8
PTPN18-204ENST00000420717 LTN1O94822 1766 aa20.01■□□□□ 0.79
PTPN18-204ENST00000420717 ZEB1P37275 1124 aaPredicted RBP20.01■□□□□ 0.79
PTPN18-204ENST00000420717 KCNH5Q8NCM2 988 aa20.01■□□□□ 0.79
PTPN18-204ENST00000420717 AATKQ6ZMQ8 1374 aa20■□□□□ 0.79
PTPN18-204ENST00000420717 CCDC7Q96M83 1385 aa20■□□□□ 0.79
PTPN18-204ENST00000420717 FAM83GA6ND36 823 aa20■□□□□ 0.79
PTPN18-204ENST00000420717 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20■□□□□ 0.79
PTPN18-204ENST00000420717 CARD14Q9BXL6 1004 aa20■□□□□ 0.79
PTPN18-204ENST00000420717 USP21Q9UK80 565 aa20■□□□□ 0.79
PTPN18-204ENST00000420717 GLI3P10071 1580 aa20■□□□□ 0.79
PTPN18-204ENST00000420717 UNC5CLQ8IV45 518 aa19.99■□□□□ 0.79
PTPN18-204ENST00000420717 PRDM11Q9NQV5 511 aa19.99■□□□□ 0.79
PTPN18-204ENST00000420717 CAMTA1Q9Y6Y1 1673 aa19.99■□□□□ 0.79
PTPN18-204ENST00000420717 TRPC5Q9UL62 973 aaPredicted RBP19.98■□□□□ 0.79
PTPN18-204ENST00000420717 WASHC2AQ641Q2 1341 aa19.97■□□□□ 0.79
PTPN18-204ENST00000420717 FYB1O15117 783 aa19.96■□□□□ 0.79
PTPN18-204ENST00000420717 ARHGEF25Q86VW2 580 aa19.96■□□□□ 0.79
PTPN18-204ENST00000420717 ZRANB1Q9UGI0 708 aa19.96■□□□□ 0.79
PTPN18-204ENST00000420717 COL5A2P05997 1499 aaPredicted RBP19.96■□□□□ 0.79
PTPN18-204ENST00000420717 NSD2O96028 1365 aa19.95■□□□□ 0.79
PTPN18-204ENST00000420717 VPS72Q15906 364 aa19.95■□□□□ 0.78
PTPN18-204ENST00000420717 ZC3H6P61129 1189 aaKnown RBP19.94■□□□□ 0.78
PTPN18-204ENST00000420717 RBM6P78332 1123 aaKnown RBP19.94■□□□□ 0.78
PTPN18-204ENST00000420717 ILDR2Q71H61 639 aa19.94■□□□□ 0.78
PTPN18-204ENST00000420717 QTRT2Q9H974 415 aaKnown RBP19.94■□□□□ 0.78
PTPN18-204ENST00000420717 CGNL1Q0VF96 1302 aa19.94■□□□□ 0.78
PTPN18-204ENST00000420717 PLEKHG5O94827 1062 aa19.93■□□□□ 0.78
PTPN18-204ENST00000420717 COG3Q96JB2 828 aa19.93■□□□□ 0.78
PTPN18-204ENST00000420717 BTG4Q9NY30 223 aa19.93■□□□□ 0.78
PTPN18-204ENST00000420717 PANK3Q9H999 370 aa19.92■□□□□ 0.78
PTPN18-204ENST00000420717 RGPD5Q99666 1765 aa19.92■□□□□ 0.78
PTPN18-204ENST00000420717 RGS12O14924 1447 aa19.92■□□□□ 0.78
PTPN18-204ENST00000420717 FAM208AQ9UK61 1670 aaKnown RBP19.91■□□□□ 0.78
PTPN18-204ENST00000420717 THSD7AQ9UPZ6 1657 aa19.91■□□□□ 0.78
PTPN18-204ENST00000420717 RXRBP28702 533 aa19.91■□□□□ 0.78
PTPN18-204ENST00000420717 CHRNA2Q15822 529 aa19.91■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms