RNA–Protein interactions for RNA: ENST00000420706.1

TMEM53-206, Transcript of transmembrane protein 53, humanhuman

TSL 2

Gene TMEM53, Length 415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-206ENST00000420706 BRD4O60885 1362 aaPredicted RBP17.09■□□□□ 0.33
TMEM53-206ENST00000420706 XPCQ01831 940 aaPredicted RBP17.08■□□□□ 0.32
TMEM53-206ENST00000420706 CGNL1Q0VF96 1302 aa17.07■□□□□ 0.32
TMEM53-206ENST00000420706 TTC21AQ8NDW8 1320 aa17.07■□□□□ 0.32
TMEM53-206ENST00000420706 FYB1O15117 783 aa17.07■□□□□ 0.32
TMEM53-206ENST00000420706 ROBO1Q9Y6N7 1651 aa17.07■□□□□ 0.32
TMEM53-206ENST00000420706 NPC1L1Q9UHC9 1359 aa17.06■□□□□ 0.32
TMEM53-206ENST00000420706 CC2D1BQ5T0F9 858 aaKnown RBP17.06■□□□□ 0.32
TMEM53-206ENST00000420706 NRKQ7Z2Y5 1582 aa17.06■□□□□ 0.32
TMEM53-206ENST00000420706 SOS2Q07890 1332 aaPredicted RBP17.05■□□□□ 0.32
TMEM53-206ENST00000420706 PAK3O75914 559 aaPredicted RBP17.05■□□□□ 0.32
TMEM53-206ENST00000420706 NME9Q86XW9 330 aa17.05■□□□□ 0.32
TMEM53-206ENST00000420706 CNGB1Q14028 1251 aaPredicted RBP17.04■□□□□ 0.32
TMEM53-206ENST00000420706 GGNBP2Q9H3C7 697 aa17.04■□□□□ 0.32
TMEM53-206ENST00000420706 PXDNQ92626 1479 aa17.04■□□□□ 0.32
TMEM53-206ENST00000420706 SBNO1A3KN83 1393 aa17.03■□□□□ 0.32
TMEM53-206ENST00000420706 NHSL1Q5SYE7 1610 aa17.03■□□□□ 0.32
TMEM53-206ENST00000420706 ANP32CO43423 234 aa17.03■□□□□ 0.32
TMEM53-206ENST00000420706 ZRANB1Q9UGI0 708 aa17.03■□□□□ 0.32
TMEM53-206ENST00000420706 TRPM3Q9HCF6 1732 aaPredicted RBP17.03■□□□□ 0.32
TMEM53-206ENST00000420706 NSD2O96028 1365 aa17.02■□□□□ 0.32
TMEM53-206ENST00000420706 ABTB2Q8N961 1025 aa17.02■□□□□ 0.32
TMEM53-206ENST00000420706 PRKRIP1Q9H875 184 aaPredicted RBP17.02■□□□□ 0.32
TMEM53-206ENST00000420706 KIF20BQ96Q89 1820 aa17.01■□□□□ 0.31
TMEM53-206ENST00000420706 USP31Q70CQ4 1352 aa17.01■□□□□ 0.31
TMEM53-206ENST00000420706 SPATA31A3Q5VYP0 1347 aa17■□□□□ 0.31
TMEM53-206ENST00000420706 AHDC1Q5TGY3 1603 aaPredicted RBP17■□□□□ 0.31
TMEM53-206ENST00000420706 RALBP1Q15311 655 aa17■□□□□ 0.31
TMEM53-206ENST00000420706 MORC1Q86VD1 984 aa17■□□□□ 0.31
TMEM53-206ENST00000420706 NLRP6P59044 892 aa16.99■□□□□ 0.31
TMEM53-206ENST00000420706 NUTM2GQ5VZR2 741 aa16.99■□□□□ 0.31
TMEM53-206ENST00000420706 COG3Q96JB2 828 aa16.99■□□□□ 0.31
TMEM53-206ENST00000420706 PARD3Q8TEW0 1356 aa16.99■□□□□ 0.31
TMEM53-206ENST00000420706 PIK3C2AO00443 1686 aa16.98■□□□□ 0.31
TMEM53-206ENST00000420706 LMOD2Q6P5Q4 547 aa16.98■□□□□ 0.31
TMEM53-206ENST00000420706 NLRP13Q86W25 1043 aa16.98■□□□□ 0.31
TMEM53-206ENST00000420706 ALS2Q96Q42 1657 aa16.97■□□□□ 0.31
TMEM53-206ENST00000420706 TNS3Q68CZ2 1445 aa16.97■□□□□ 0.31
TMEM53-206ENST00000420706 ANKRD26Q9UPS8 1709 aa16.97■□□□□ 0.31
TMEM53-206ENST00000420706 LRRC59Q96AG4 307 aaKnown RBP16.97■□□□□ 0.31
TMEM53-206ENST00000420706 OVOS2A0A0J9YW53 1432 aa16.96■□□□□ 0.31
TMEM53-206ENST00000420706 OVOS2Q6IE36 1432 aa16.96■□□□□ 0.31
TMEM53-206ENST00000420706 MIER1Q8N108 512 aa16.96■□□□□ 0.31
TMEM53-206ENST00000420706 PHLPP1O60346 1717 aa16.96■□□□□ 0.3
TMEM53-206ENST00000420706 HSPA1LP34931 641 aa16.95■□□□□ 0.3
TMEM53-206ENST00000420706 USP54Q70EL1 1684 aa16.94■□□□□ 0.3
TMEM53-206ENST00000420706 ARHGEF10O15013 1369 aa16.94■□□□□ 0.3
TMEM53-206ENST00000420706 MARF1Q9Y4F3 1742 aaKnown RBP16.93■□□□□ 0.3
TMEM53-206ENST00000420706 FBLN1P23142 703 aa16.93■□□□□ 0.3
TMEM53-206ENST00000420706 PPP2R1AP30153 589 aa16.93■□□□□ 0.3
TMEM53-206ENST00000420706 TNNT2P45379 298 aaPredicted RBP16.93■□□□□ 0.3
TMEM53-206ENST00000420706 COL16A1Q07092 1604 aaPredicted RBP16.92■□□□□ 0.3
TMEM53-206ENST00000420706 USP19O94966 1318 aa16.92■□□□□ 0.3
TMEM53-206ENST00000420706 MYBBP1AQ9BQG0 1328 aaKnown RBP16.92■□□□□ 0.3
TMEM53-206ENST00000420706 AATKQ6ZMQ8 1374 aa16.9■□□□□ 0.3
TMEM53-206ENST00000420706 PLEKHG5O94827 1062 aa16.9■□□□□ 0.3
TMEM53-206ENST00000420706 GCP02774 474 aa16.9■□□□□ 0.3
TMEM53-206ENST00000420706 KCNH5Q8NCM2 988 aa16.9■□□□□ 0.3
TMEM53-206ENST00000420706 MED1Q15648 1581 aaPredicted RBP16.89■□□□□ 0.3
TMEM53-206ENST00000420706 SOX12O15370 315 aa16.89■□□□□ 0.29
TMEM53-206ENST00000420706 CABLES1Q8TDN4 633 aa16.89■□□□□ 0.29
TMEM53-206ENST00000420706 SLIT3O75094 1523 aa16.89■□□□□ 0.29
TMEM53-206ENST00000420706 PNPLA6Q8IY17 1366 aa16.89■□□□□ 0.29
TMEM53-206ENST00000420706 POLKQ9UBT6 870 aa16.88■□□□□ 0.29
TMEM53-206ENST00000420706 MAP2P11137 1827 aaKnown RBP16.88■□□□□ 0.29
TMEM53-206ENST00000420706 MTHFSP49914 203 aa16.87■□□□□ 0.29
TMEM53-206ENST00000420706 RRS1Q15050 365 aaKnown RBP16.87■□□□□ 0.29
TMEM53-206ENST00000420706 CCER2I3L3R5 266 aa16.86■□□□□ 0.29
TMEM53-206ENST00000420706 CRYBG1Q9Y4K1 1723 aa16.86■□□□□ 0.29
TMEM53-206ENST00000420706 CCDC184Q52MB2 194 aa16.85■□□□□ 0.29
TMEM53-206ENST00000420706 EMILIN1Q9Y6C2 1016 aa16.85■□□□□ 0.29
TMEM53-206ENST00000420706 NFAT5O94916 1531 aa16.85■□□□□ 0.29
TMEM53-206ENST00000420706 COL22A1Q8NFW1 1626 aaPredicted RBP16.85■□□□□ 0.29
TMEM53-206ENST00000420706 PHRF1Q9P1Y6 1649 aaKnown RBP16.85■□□□□ 0.29
TMEM53-206ENST00000420706 ARHGEF25Q86VW2 580 aa16.84■□□□□ 0.29
TMEM53-206ENST00000420706 MAP3K19Q56UN5 1328 aa16.84■□□□□ 0.29
TMEM53-206ENST00000420706 JCADQ9P266 1359 aa16.84■□□□□ 0.29
TMEM53-206ENST00000420706 ZC3H6P61129 1189 aaKnown RBP16.83■□□□□ 0.28
TMEM53-206ENST00000420706 PPM1GO15355 546 aaPredicted RBP16.82■□□□□ 0.28
TMEM53-206ENST00000420706 HAP1P54257 671 aaPredicted RBP16.82■□□□□ 0.28
TMEM53-206ENST00000420706 SHPRHQ149N8 1683 aa16.81■□□□□ 0.28
TMEM53-206ENST00000420706 SMG6Q86US8 1419 aaKnown RBP16.81■□□□□ 0.28
TMEM53-206ENST00000420706 AMPHP49418 695 aa16.81■□□□□ 0.28
TMEM53-206ENST00000420706 INSRP06213 1382 aa16.8■□□□□ 0.28
TMEM53-206ENST00000420706 ABCA3Q99758 1704 aa16.8■□□□□ 0.28
TMEM53-206ENST00000420706 ZBTB7CA1YPR0 619 aa16.8■□□□□ 0.28
TMEM53-206ENST00000420706 IP6K1Q92551 441 aa16.8■□□□□ 0.28
TMEM53-206ENST00000420706 MRS2Q9HD23 443 aa16.8■□□□□ 0.28
TMEM53-206ENST00000420706 CPDO75976 1380 aa16.79■□□□□ 0.28
TMEM53-206ENST00000420706 KIF24Q5T7B8 1368 aa16.79■□□□□ 0.28
TMEM53-206ENST00000420706 HOXC9P31274 260 aa16.79■□□□□ 0.28
TMEM53-206ENST00000420706 CFAP53Q96M91 514 aa16.79■□□□□ 0.28
TMEM53-206ENST00000420706 LTN1O94822 1766 aa16.79■□□□□ 0.28
TMEM53-206ENST00000420706 PEAK1Q9H792 1746 aa16.79■□□□□ 0.28
TMEM53-206ENST00000420706 KIAA0232Q92628 1395 aa16.78■□□□□ 0.28
TMEM53-206ENST00000420706 HSP90AB2PQ58FF8 381 aa16.78■□□□□ 0.28
TMEM53-206ENST00000420706 FLT4P35916 1363 aa16.77■□□□□ 0.28
TMEM53-206ENST00000420706 SPATA31A6Q5VVP1 1343 aa16.77■□□□□ 0.28
TMEM53-206ENST00000420706 NUTM2BA6NNL0 878 aaPredicted RBP16.77■□□□□ 0.28
TMEM53-206ENST00000420706 NUTM2EB1AL46 878 aaPredicted RBP16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms