RNA–Protein interactions for RNA: ENST00000420646.6

SNCA-206, Transcript of synuclein alpha, humanhuman

TSL 2 BASIC

Gene SNCA, Length 3,127 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-206ENST00000420646 DIAPH1O60610 1272 aaKnown RBP11.46□□□□□ -0.57
SNCA-206ENST00000420646 PMFBP1Q8TBY8 1022 aa11.46□□□□□ -0.57
SNCA-206ENST00000420646 PLEKHF1Q96S99 279 aa11.46□□□□□ -0.57
SNCA-206ENST00000420646 CLUAP1Q96AJ1 413 aa11.46□□□□□ -0.57
SNCA-206ENST00000420646 NINLQ9Y2I6 1382 aa11.46□□□□□ -0.57
SNCA-206ENST00000420646 ILDR1Q86SU0 546 aaPredicted RBP11.46□□□□□ -0.58
SNCA-206ENST00000420646 SETD1AO15047 1707 aaKnown RBP11.46□□□□□ -0.58
SNCA-206ENST00000420646 ADAMTS13Q76LX8 1427 aa11.46□□□□□ -0.58
SNCA-206ENST00000420646 AMOTL2Q9Y2J4 779 aa11.45□□□□□ -0.58
SNCA-206ENST00000420646 COG6Q9Y2V7 657 aa11.45□□□□□ -0.58
SNCA-206ENST00000420646 CANXP27824 592 aaKnown RBP11.45□□□□□ -0.58
SNCA-206ENST00000420646 TMPOP42166 694 aaKnown RBP11.45□□□□□ -0.58
SNCA-206ENST00000420646 PHACTR3Q96KR7 559 aa11.45□□□□□ -0.58
SNCA-206ENST00000420646 THUMPD2Q9BTF0 503 aaKnown RBP11.45□□□□□ -0.58
SNCA-206ENST00000420646 PHF23Q9BUL5 403 aaPredicted RBP11.44□□□□□ -0.58
SNCA-206ENST00000420646 TRIM35Q9UPQ4 493 aa11.44□□□□□ -0.58
SNCA-206ENST00000420646 EID1Q9Y6B2 187 aa11.44□□□□□ -0.58
SNCA-206ENST00000420646 RIPK4P57078 832 aa11.44□□□□□ -0.58
SNCA-206ENST00000420646 USP32Q8NFA0 1604 aa11.44□□□□□ -0.58
SNCA-206ENST00000420646 PRKAR2BP31323 418 aa11.44□□□□□ -0.58
SNCA-206ENST00000420646 MAPK8IP3Q9UPT6 1336 aa11.43□□□□□ -0.58
SNCA-206ENST00000420646 LAS1LQ9Y4W2 734 aaKnown RBP11.43□□□□□ -0.58
SNCA-206ENST00000420646 PTPRUQ92729 1446 aa11.43□□□□□ -0.58
SNCA-206ENST00000420646 RLBP1P12271 317 aa11.43□□□□□ -0.58
SNCA-206ENST00000420646 RARSP54136 660 aaKnown RBP11.43□□□□□ -0.58
SNCA-206ENST00000420646 UBR1Q8IWV7 1749 aa11.42□□□□□ -0.58
SNCA-206ENST00000420646 IQSEC2Q5JU85 1478 aa11.42□□□□□ -0.58
SNCA-206ENST00000420646 ACEP12821 1306 aa11.42□□□□□ -0.58
SNCA-206ENST00000420646 CPS1P31327 1500 aa11.42□□□□□ -0.58
SNCA-206ENST00000420646 NPM2Q86SE8 214 aaKnown RBP11.42□□□□□ -0.58
SNCA-206ENST00000420646 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.42□□□□□ -0.58
SNCA-206ENST00000420646 EXOSC9Q06265 439 aaKnown RBP11.42□□□□□ -0.58
SNCA-206ENST00000420646 COL3A1P02461 1466 aaPredicted RBP11.41□□□□□ -0.58
SNCA-206ENST00000420646 WDR63Q8IWG1 891 aa11.41□□□□□ -0.58
SNCA-206ENST00000420646 COG3Q96JB2 828 aa11.41□□□□□ -0.58
SNCA-206ENST00000420646 DLC1Q96QB1 1528 aa11.41□□□□□ -0.58
SNCA-206ENST00000420646 CPSF1Q10570 1443 aaKnown RBP11.41□□□□□ -0.58
SNCA-206ENST00000420646 NUTM2GQ5VZR2 741 aa11.4□□□□□ -0.58
SNCA-206ENST00000420646 FANCIQ9NVI1 1328 aa11.4□□□□□ -0.58
SNCA-206ENST00000420646 PLEKHG5O94827 1062 aa11.4□□□□□ -0.58
SNCA-206ENST00000420646 IGHDP01880 384 aa11.4□□□□□ -0.58
SNCA-206ENST00000420646 KCNA6P17658 529 aa11.4□□□□□ -0.59
SNCA-206ENST00000420646 RGS3P49796 1198 aa11.4□□□□□ -0.59
SNCA-206ENST00000420646 PNPLA6Q8IY17 1366 aa11.39□□□□□ -0.59
SNCA-206ENST00000420646 PLEKHG1Q9ULL1 1385 aa11.39□□□□□ -0.59
SNCA-206ENST00000420646 THEMISQ8N1K5 641 aaPredicted RBP11.39□□□□□ -0.59
SNCA-206ENST00000420646 RSPH6AQ9H0K4 717 aa11.39□□□□□ -0.59
SNCA-206ENST00000420646 ELL2O00472 640 aaPredicted RBP11.39□□□□□ -0.59
SNCA-206ENST00000420646 TCERG1O14776 1098 aaKnown RBP11.39□□□□□ -0.59
SNCA-206ENST00000420646 DCTN1Q14203 1278 aa11.39□□□□□ -0.59
SNCA-206ENST00000420646 CCDC27Q2M243 656 aa11.39□□□□□ -0.59
SNCA-206ENST00000420646 AEBP1Q8IUX7 1158 aa11.39□□□□□ -0.59
SNCA-206ENST00000420646 NGEFQ8N5V2 710 aa11.39□□□□□ -0.59
SNCA-206ENST00000420646 FAM83GA6ND36 823 aa11.38□□□□□ -0.59
SNCA-206ENST00000420646 KDM2BQ8NHM5 1336 aa11.38□□□□□ -0.59
SNCA-206ENST00000420646 ATP7BP35670 1465 aa11.38□□□□□ -0.59
SNCA-206ENST00000420646 PDE4AP27815 886 aa11.38□□□□□ -0.59
SNCA-206ENST00000420646 IL13P35225 146 aa11.38□□□□□ -0.59
SNCA-206ENST00000420646 FAM135BQ49AJ0 1406 aa11.38□□□□□ -0.59
SNCA-206ENST00000420646 EDC4Q6P2E9 1401 aaKnown RBP11.38□□□□□ -0.59
SNCA-206ENST00000420646 HSP90AB2PQ58FF8 381 aa11.38□□□□□ -0.59
SNCA-206ENST00000420646 MYH16Q9H6N6 1097 aa11.38□□□□□ -0.59
SNCA-206ENST00000420646 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.38□□□□□ -0.59
SNCA-206ENST00000420646 TTC21BQ7Z4L5 1316 aa11.37□□□□□ -0.59
SNCA-206ENST00000420646 C3P01024 1663 aa11.37□□□□□ -0.59
SNCA-206ENST00000420646 TECPR2O15040 1411 aa11.37□□□□□ -0.59
SNCA-206ENST00000420646 FCHSD2O94868 740 aa11.37□□□□□ -0.59
SNCA-206ENST00000420646 SIRT1Q96EB6 747 aa11.37□□□□□ -0.59
SNCA-206ENST00000420646 MED14O60244 1454 aa11.36□□□□□ -0.59
SNCA-206ENST00000420646 MAP2P11137 1827 aaKnown RBP11.36□□□□□ -0.59
SNCA-206ENST00000420646 NGDNQ8NEJ9 315 aaKnown RBP11.36□□□□□ -0.59
SNCA-206ENST00000420646 SSH1Q8WYL5 1049 aa11.36□□□□□ -0.59
SNCA-206ENST00000420646 SMC4Q9NTJ3 1288 aa11.36□□□□□ -0.59
SNCA-206ENST00000420646 PAK3O75914 559 aaPredicted RBP11.35□□□□□ -0.59
SNCA-206ENST00000420646 ZNF692Q9BU19 519 aaPredicted RBP11.35□□□□□ -0.59
SNCA-206ENST00000420646 TBX22Q9Y458 520 aa11.35□□□□□ -0.59
SNCA-206ENST00000420646 PCDHB15Q9Y5E8 787 aa11.35□□□□□ -0.59
SNCA-206ENST00000420646 SULT6B1Q6IMI4 303 aa11.34□□□□□ -0.59
SNCA-206ENST00000420646 KIF20BQ96Q89 1820 aa11.34□□□□□ -0.59
SNCA-206ENST00000420646 LRRC7Q96NW7 1537 aa11.34□□□□□ -0.59
SNCA-206ENST00000420646 PDE3AQ14432 1141 aa11.34□□□□□ -0.59
SNCA-206ENST00000420646 CENPQQ7L2Z9 268 aaPredicted RBP11.34□□□□□ -0.59
SNCA-206ENST00000420646 TSPYL6Q8N831 410 aa11.34□□□□□ -0.59
SNCA-206ENST00000420646 EIF4A2Q14240 407 aaKnown RBP11.33□□□□□ -0.6
SNCA-206ENST00000420646 ANP32EQ9BTT0 268 aa11.33□□□□□ -0.6
SNCA-206ENST00000420646 BACH2Q9BYV9 841 aa11.33□□□□□ -0.6
SNCA-206ENST00000420646 NOB1Q9ULX3 412 aaKnown RBP11.33□□□□□ -0.6
SNCA-206ENST00000420646 FER1L4A9Z1Z3 1794 aa11.33□□□□□ -0.6
SNCA-206ENST00000420646 PLEKHG3A1L390 1219 aa11.33□□□□□ -0.6
SNCA-206ENST00000420646 NEFMP07197 916 aa11.33□□□□□ -0.6
SNCA-206ENST00000420646 C14orf37Q86TY3 774 aa11.33□□□□□ -0.6
SNCA-206ENST00000420646 CDC42BPGQ6DT37 1551 aa11.33□□□□□ -0.6
SNCA-206ENST00000420646 NFE2L2Q16236 605 aa11.32□□□□□ -0.6
SNCA-206ENST00000420646 ANKRD26Q9UPS8 1709 aa11.32□□□□□ -0.6
SNCA-206ENST00000420646 ADGRB2O60241 1585 aa11.32□□□□□ -0.6
SNCA-206ENST00000420646 TRIM27P14373 513 aa11.32□□□□□ -0.6
SNCA-206ENST00000420646 FTSJ3Q8IY81 847 aaKnown RBP11.31□□□□□ -0.6
SNCA-206ENST00000420646 KRT24Q2M2I5 525 aa11.31□□□□□ -0.6
SNCA-206ENST00000420646 USP6P35125 1406 aa11.31□□□□□ -0.6
SNCA-206ENST00000420646 FOXO3O43524 673 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms