RNA–Protein interactions for RNA: ENST00000420508.1

AP000550.1-201, humanhuman

TSL 1 (best) BASIC

Gene AP000550.1, Length 4,833 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000550.1-201ENST00000420508 ADGRF5Q8IZF2 1346 aa18.1■□□□□ 0.49
AP000550.1-201ENST00000420508 IFIT2P09913 472 aaKnown RBP18.1■□□□□ 0.49
AP000550.1-201ENST00000420508 CHMP3Q9Y3E7 222 aa18.1■□□□□ 0.49
AP000550.1-201ENST00000420508 PLEKHO1Q53GL0 409 aaPredicted RBP18.09■□□□□ 0.49
AP000550.1-201ENST00000420508 DRC7Q8IY82 874 aa18.09■□□□□ 0.49
AP000550.1-201ENST00000420508 DDX49Q9Y6V7 483 aaKnown RBP18.09■□□□□ 0.49
AP000550.1-201ENST00000420508 ASXL2Q76L83 1435 aa18.09■□□□□ 0.49
AP000550.1-201ENST00000420508 HSP90B1P14625 803 aaKnown RBP18.09■□□□□ 0.49
AP000550.1-201ENST00000420508 TMPOP42166 694 aaKnown RBP18.09■□□□□ 0.49
AP000550.1-201ENST00000420508 RAPGEF4Q8WZA2 1011 aa18.09■□□□□ 0.49
AP000550.1-201ENST00000420508 PIK3C2GO75747 1445 aa18.08■□□□□ 0.49
AP000550.1-201ENST00000420508 BCAR3O75815 825 aa18.08■□□□□ 0.49
AP000550.1-201ENST00000420508 NPC1L1Q9UHC9 1359 aa18.08■□□□□ 0.48
AP000550.1-201ENST00000420508 UBTFL1P0CB47 393 aaPredicted RBP18.08■□□□□ 0.48
AP000550.1-201ENST00000420508 G3BP1Q13283 466 aaKnown RBP eCLIP18.08■□□□□ 0.48
AP000550.1-201ENST00000420508 NOB1Q9ULX3 412 aaKnown RBP18.08■□□□□ 0.48
AP000550.1-201ENST00000420508 RABEP1Q15276 862 aa18.07■□□□□ 0.48
AP000550.1-201ENST00000420508 ISY1Q9ULR0 285 aaKnown RBP18.07■□□□□ 0.48
AP000550.1-201ENST00000420508 TPRNQ4KMQ1 711 aa18.06■□□□□ 0.48
AP000550.1-201ENST00000420508 IFT57Q9NWB7 429 aa18.06■□□□□ 0.48
AP000550.1-201ENST00000420508 ERC1Q8IUD2 1116 aa18.06■□□□□ 0.48
AP000550.1-201ENST00000420508 RTN4Q9NQC3 1192 aaKnown RBP18.06■□□□□ 0.48
AP000550.1-201ENST00000420508 COL17A1Q9UMD9 1497 aaPredicted RBP18.06■□□□□ 0.48
AP000550.1-201ENST00000420508 HIP1O00291 1037 aa18.05■□□□□ 0.48
AP000550.1-201ENST00000420508 RPAP2Q8IXW5 612 aaPredicted RBP18.05■□□□□ 0.48
AP000550.1-201ENST00000420508 GNAI2P04899 355 aa18.04■□□□□ 0.48
AP000550.1-201ENST00000420508 ATF3P18847 181 aa18.04■□□□□ 0.48
AP000550.1-201ENST00000420508 NFKBIBQ15653 356 aa18.04■□□□□ 0.48
AP000550.1-201ENST00000420508 EIF2S2P20042 333 aaKnown RBP18.04■□□□□ 0.48
AP000550.1-201ENST00000420508 POLR3AO14802 1390 aaPredicted RBP18.04■□□□□ 0.48
AP000550.1-201ENST00000420508 SRCIN1Q9C0H9 1055 aa18.04■□□□□ 0.48
AP000550.1-201ENST00000420508 NUDT16Q96DE0 195 aaKnown RBP18.04■□□□□ 0.48
AP000550.1-201ENST00000420508 SLC4A3P48751 1232 aa18.03■□□□□ 0.48
AP000550.1-201ENST00000420508 CEP170Q5SW79 1584 aa18.03■□□□□ 0.48
AP000550.1-201ENST00000420508 TRAPPC8Q9Y2L5 1435 aa18.03■□□□□ 0.48
AP000550.1-201ENST00000420508 DUSP27Q5VZP5 1158 aa18.02■□□□□ 0.48
AP000550.1-201ENST00000420508 CIZ1Q9ULV3 898 aaPredicted RBP18.02■□□□□ 0.48
AP000550.1-201ENST00000420508 RARSP54136 660 aaKnown RBP18.02■□□□□ 0.48
AP000550.1-201ENST00000420508 CCDC27Q2M243 656 aa18.02■□□□□ 0.48
AP000550.1-201ENST00000420508 ABTB2Q8N961 1025 aa18.02■□□□□ 0.48
AP000550.1-201ENST00000420508 IL27Q8NEV9 243 aa18.02■□□□□ 0.48
AP000550.1-201ENST00000420508 CNTROBQ8N137 903 aa18.02■□□□□ 0.47
AP000550.1-201ENST00000420508 SULT6B1Q6IMI4 303 aa18.01■□□□□ 0.47
AP000550.1-201ENST00000420508 CPLX2Q6PUV4 134 aaKnown RBP18.01■□□□□ 0.47
AP000550.1-201ENST00000420508 TSR2Q969E8 191 aaKnown RBP18.01■□□□□ 0.47
AP000550.1-201ENST00000420508 ANO2Q9NQ90 1003 aa18.01■□□□□ 0.47
AP000550.1-201ENST00000420508 IDI1Q13907 227 aa18■□□□□ 0.47
AP000550.1-201ENST00000420508 CWC22Q9HCG8 908 aaKnown RBP18■□□□□ 0.47
AP000550.1-201ENST00000420508 ZNF330Q9Y3S2 320 aaPredicted RBP18■□□□□ 0.47
AP000550.1-201ENST00000420508 MAGI3Q5TCQ9 1506 aa18■□□□□ 0.47
AP000550.1-201ENST00000420508 FOXD4L1Q9NU39 408 aa18■□□□□ 0.47
AP000550.1-201ENST00000420508 FAM184AQ8NB25 1140 aa18■□□□□ 0.47
AP000550.1-201ENST00000420508 AMER1Q5JTC6 1135 aaPredicted RBP17.99■□□□□ 0.47
AP000550.1-201ENST00000420508 RSPH6AQ9H0K4 717 aa17.99■□□□□ 0.47
AP000550.1-201ENST00000420508 ABCA8O94911 1581 aa17.99■□□□□ 0.47
AP000550.1-201ENST00000420508 TTC21BQ7Z4L5 1316 aa17.99■□□□□ 0.47
AP000550.1-201ENST00000420508 H3BQV1 296 aa17.99■□□□□ 0.47
AP000550.1-201ENST00000420508 IFFO2Q5TF58 517 aa17.99■□□□□ 0.47
AP000550.1-201ENST00000420508 CHD1LQ86WJ1 897 aa17.99■□□□□ 0.47
AP000550.1-201ENST00000420508 CLASRPQ8N2M8 674 aaKnown RBP17.99■□□□□ 0.47
AP000550.1-201ENST00000420508 PSMA5P28066 241 aa17.98■□□□□ 0.47
AP000550.1-201ENST00000420508 ANKLE2Q86XL3 938 aa17.98■□□□□ 0.47
AP000550.1-201ENST00000420508 WASLO00401 505 aaPredicted RBP17.98■□□□□ 0.47
AP000550.1-201ENST00000420508 PDIA4P13667 645 aaKnown RBP17.98■□□□□ 0.47
AP000550.1-201ENST00000420508 EVA1CP58658 441 aa17.98■□□□□ 0.47
AP000550.1-201ENST00000420508 KCNH5Q8NCM2 988 aa17.98■□□□□ 0.47
AP000550.1-201ENST00000420508 TESK2Q96S53 571 aa17.97■□□□□ 0.47
AP000550.1-201ENST00000420508 MRE11P49959 708 aa17.97■□□□□ 0.47
AP000550.1-201ENST00000420508 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.97■□□□□ 0.47
AP000550.1-201ENST00000420508 ATP7AQ04656 1500 aa17.97■□□□□ 0.47
AP000550.1-201ENST00000420508 NCBP3Q53F19 620 aaKnown RBP17.96■□□□□ 0.47
AP000550.1-201ENST00000420508 MBD3O95983 291 aa17.96■□□□□ 0.47
AP000550.1-201ENST00000420508 UHRF1BP1LA0JNW5 1464 aa17.96■□□□□ 0.47
AP000550.1-201ENST00000420508 CFAP74Q9C0B2 1584 aa17.96■□□□□ 0.47
AP000550.1-201ENST00000420508 RIC3Q7Z5B4 369 aa17.95■□□□□ 0.46
AP000550.1-201ENST00000420508 SMC3Q9UQE7 1217 aa17.95■□□□□ 0.46
AP000550.1-201ENST00000420508 ZFYVE9O95405 1425 aa17.94■□□□□ 0.46
AP000550.1-201ENST00000420508 TMX4Q9H1E5 349 aaPredicted RBP17.94■□□□□ 0.46
AP000550.1-201ENST00000420508 LETM1O95202 739 aaPredicted RBP17.94■□□□□ 0.46
AP000550.1-201ENST00000420508 SLC4A2P04920 1241 aa17.94■□□□□ 0.46
AP000550.1-201ENST00000420508 NOL8Q76FK4 1167 aaKnown RBP17.94■□□□□ 0.46
AP000550.1-201ENST00000420508 SF3A1Q15459 793 aaKnown RBP17.94■□□□□ 0.46
AP000550.1-201ENST00000420508 MYO5CQ9NQX4 1742 aa17.93■□□□□ 0.46
AP000550.1-201ENST00000420508 HDGFL1Q5TGJ6 251 aa17.93■□□□□ 0.46
AP000550.1-201ENST00000420508 LRRCC1Q9C099 1032 aa17.93■□□□□ 0.46
AP000550.1-201ENST00000420508 SYNE3Q6ZMZ3 975 aa17.92■□□□□ 0.46
AP000550.1-201ENST00000420508 TATP17735 454 aaPredicted RBP17.92■□□□□ 0.46
AP000550.1-201ENST00000420508 ARHGAP45Q92619 1136 aa17.92■□□□□ 0.46
AP000550.1-201ENST00000420508 PTPRCP08575 1304 aa17.91■□□□□ 0.46
AP000550.1-201ENST00000420508 PDCP20941 246 aa17.91■□□□□ 0.46
AP000550.1-201ENST00000420508 ESCO1Q5FWF5 840 aa17.91■□□□□ 0.46
AP000550.1-201ENST00000420508 NLRP2Q9NX02 1062 aa17.91■□□□□ 0.46
AP000550.1-201ENST00000420508 SURF6O75683 361 aaKnown RBP17.9■□□□□ 0.46
AP000550.1-201ENST00000420508 SPG7Q9UQ90 795 aa17.9■□□□□ 0.46
AP000550.1-201ENST00000420508 TMEM57Q8N5G2 664 aa17.89■□□□□ 0.46
AP000550.1-201ENST00000420508 GNAT3A8MTJ3 354 aa17.89■□□□□ 0.45
AP000550.1-201ENST00000420508 K7ELQ4 463 aaPredicted RBP17.89■□□□□ 0.45
AP000550.1-201ENST00000420508 NECTIN2Q92692 538 aa17.89■□□□□ 0.45
AP000550.1-201ENST00000420508 TRDNQ13061 729 aa17.88■□□□□ 0.45
AP000550.1-201ENST00000420508 PROSER2Q86WR7 435 aaPredicted RBP17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms