RNA–Protein interactions for RNA: ENST00000419830.2

USP8-203, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 2

Gene USP8, Length 2,402 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-203ENST00000419830 NEO1Q92859 1461 aa11.74□□□□□ -0.53
USP8-203ENST00000419830 SLC52A1Q9NWF4 448 aa11.74□□□□□ -0.53
USP8-203ENST00000419830 MYO5BQ9ULV0 1848 aa11.73□□□□□ -0.53
USP8-203ENST00000419830 OSCARQ8IYS5 282 aa11.73□□□□□ -0.53
USP8-203ENST00000419830 MINK1Q8N4C8 1332 aaPredicted RBP11.73□□□□□ -0.53
USP8-203ENST00000419830 PRAM1Q96QH2 718 aa11.72□□□□□ -0.53
USP8-203ENST00000419830 RTN4Q9NQC3 1192 aaKnown RBP11.72□□□□□ -0.53
USP8-203ENST00000419830 PNPLA6Q8IY17 1366 aa11.72□□□□□ -0.53
USP8-203ENST00000419830 SMC4Q9NTJ3 1288 aa11.72□□□□□ -0.53
USP8-203ENST00000419830 YEATS2Q9ULM3 1422 aa11.72□□□□□ -0.53
USP8-203ENST00000419830 IL16Q14005 1332 aa11.72□□□□□ -0.53
USP8-203ENST00000419830 MED14O60244 1454 aa11.72□□□□□ -0.53
USP8-203ENST00000419830 TMEM131LA2VDJ0 1609 aa11.72□□□□□ -0.53
USP8-203ENST00000419830 HDAC1Q13547 482 aaPredicted RBP11.71□□□□□ -0.53
USP8-203ENST00000419830 BECN1Q14457 450 aa11.71□□□□□ -0.53
USP8-203ENST00000419830 FTSJ3Q8IY81 847 aaKnown RBP11.71□□□□□ -0.53
USP8-203ENST00000419830 TBC1D2Q9BYX2 928 aa11.71□□□□□ -0.53
USP8-203ENST00000419830 ATAD2Q6PL18 1390 aa11.71□□□□□ -0.53
USP8-203ENST00000419830 ATF7IPQ6VMQ6 1270 aa11.71□□□□□ -0.54
USP8-203ENST00000419830 TERF2IPQ9NYB0 399 aa11.71□□□□□ -0.54
USP8-203ENST00000419830 NOB1Q9ULX3 412 aaKnown RBP11.71□□□□□ -0.54
USP8-203ENST00000419830 YTHDC2Q9H6S0 1430 aaKnown RBP11.7□□□□□ -0.54
USP8-203ENST00000419830 SLKQ9H2G2 1235 aaPredicted RBP11.7□□□□□ -0.54
USP8-203ENST00000419830 RIPK4P57078 832 aa11.7□□□□□ -0.54
USP8-203ENST00000419830 RICTORQ6R327 1708 aa11.7□□□□□ -0.54
USP8-203ENST00000419830 CLTCQ00610 1675 aaKnown RBP11.69□□□□□ -0.54
USP8-203ENST00000419830 ANKRD26Q9UPS8 1709 aa11.69□□□□□ -0.54
USP8-203ENST00000419830 FBXO31Q5XUX0 539 aaPredicted RBP11.69□□□□□ -0.54
USP8-203ENST00000419830 ZBTB40Q9NUA8 1239 aa11.69□□□□□ -0.54
USP8-203ENST00000419830 ARHGEF40Q8TER5 1519 aa11.69□□□□□ -0.54
USP8-203ENST00000419830 DIAPH1O60610 1272 aaKnown RBP11.69□□□□□ -0.54
USP8-203ENST00000419830 SMC5Q8IY18 1101 aa11.69□□□□□ -0.54
USP8-203ENST00000419830 CDK19Q9BWU1 502 aa11.69□□□□□ -0.54
USP8-203ENST00000419830 DDX19BQ9UMR2 479 aa11.69□□□□□ -0.54
USP8-203ENST00000419830 FBLN1P23142 703 aa11.68□□□□□ -0.54
USP8-203ENST00000419830 ITPRIPQ8IWB1 547 aa11.68□□□□□ -0.54
USP8-203ENST00000419830 TMEM57Q8N5G2 664 aa11.68□□□□□ -0.54
USP8-203ENST00000419830 UPF2Q9HAU5 1272 aaKnown RBP11.68□□□□□ -0.54
USP8-203ENST00000419830 CABP1Q9NZU7 370 aa11.68□□□□□ -0.54
USP8-203ENST00000419830 POGKQ9P215 609 aa11.68□□□□□ -0.54
USP8-203ENST00000419830 PREX1Q8TCU6 1659 aa11.68□□□□□ -0.54
USP8-203ENST00000419830 FCHSD2O94868 740 aa11.67□□□□□ -0.54
USP8-203ENST00000419830 ALKQ9UM73 1620 aa11.67□□□□□ -0.54
USP8-203ENST00000419830 HDGFL2Q7Z4V5 671 aaPredicted RBP11.66□□□□□ -0.54
USP8-203ENST00000419830 RSPH6AQ9H0K4 717 aa11.66□□□□□ -0.54
USP8-203ENST00000419830 POLKQ9UBT6 870 aa11.66□□□□□ -0.54
USP8-203ENST00000419830 PHACTR3Q96KR7 559 aa11.65□□□□□ -0.55
USP8-203ENST00000419830 C22orf23Q9BZE7 217 aa11.65□□□□□ -0.55
USP8-203ENST00000419830 CDC42BPGQ6DT37 1551 aa11.64□□□□□ -0.55
USP8-203ENST00000419830 ALDH1L2Q3SY69 923 aa11.64□□□□□ -0.55
USP8-203ENST00000419830 LRRC7Q96NW7 1537 aa11.64□□□□□ -0.55
USP8-203ENST00000419830 IPO8O15397 1037 aaKnown RBP11.64□□□□□ -0.55
USP8-203ENST00000419830 PRKAR2BP31323 418 aa11.64□□□□□ -0.55
USP8-203ENST00000419830 MFAP1P55081 439 aaKnown RBP11.64□□□□□ -0.55
USP8-203ENST00000419830 BRPF1P55201 1214 aaPredicted RBP11.64□□□□□ -0.55
USP8-203ENST00000419830 NUCB1Q02818 461 aa11.64□□□□□ -0.55
USP8-203ENST00000419830 FAM135BQ49AJ0 1406 aa11.63□□□□□ -0.55
USP8-203ENST00000419830 KIF16BQ96L93 1317 aa11.63□□□□□ -0.55
USP8-203ENST00000419830 WAPLQ7Z5K2 1190 aa11.63□□□□□ -0.55
USP8-203ENST00000419830 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.63□□□□□ -0.55
USP8-203ENST00000419830 PNNQ9H307 717 aaKnown RBP11.63□□□□□ -0.55
USP8-203ENST00000419830 ANO8Q9HCE9 1232 aaPredicted RBP11.62□□□□□ -0.55
USP8-203ENST00000419830 KIF20BQ96Q89 1820 aa11.62□□□□□ -0.55
USP8-203ENST00000419830 PPIP5K1Q6PFW1 1433 aa11.62□□□□□ -0.55
USP8-203ENST00000419830 SPRYD3Q8NCJ5 442 aa11.62□□□□□ -0.55
USP8-203ENST00000419830 THUMPD2Q9BTF0 503 aaKnown RBP11.62□□□□□ -0.55
USP8-203ENST00000419830 VAMP4O75379 141 aa11.61□□□□□ -0.55
USP8-203ENST00000419830 TSPYL6Q8N831 410 aa11.61□□□□□ -0.55
USP8-203ENST00000419830 ZBTB7BO15156 539 aaPredicted RBP11.61□□□□□ -0.55
USP8-203ENST00000419830 HMOX1P09601 288 aa11.6□□□□□ -0.55
USP8-203ENST00000419830 NFE2L2Q16236 605 aa11.6□□□□□ -0.55
USP8-203ENST00000419830 MRPL50Q8N5N7 158 aaKnown RBP11.6□□□□□ -0.55
USP8-203ENST00000419830 ZNF853P0CG23 659 aa11.6□□□□□ -0.55
USP8-203ENST00000419830 IL13P35225 146 aa11.6□□□□□ -0.55
USP8-203ENST00000419830 CHD1LQ86WJ1 897 aa11.6□□□□□ -0.55
USP8-203ENST00000419830 ZNF428Q96B54 188 aa11.6□□□□□ -0.55
USP8-203ENST00000419830 LNPKQ9C0E8 428 aa11.6□□□□□ -0.55
USP8-203ENST00000419830 EMILIN1Q9Y6C2 1016 aa11.6□□□□□ -0.55
USP8-203ENST00000419830 MAP2P11137 1827 aaKnown RBP11.6□□□□□ -0.55
USP8-203ENST00000419830 ZNF692Q9BU19 519 aaPredicted RBP11.59□□□□□ -0.55
USP8-203ENST00000419830 ATP7BP35670 1465 aa11.59□□□□□ -0.55
USP8-203ENST00000419830 PIK3R4Q99570 1358 aa11.59□□□□□ -0.55
USP8-203ENST00000419830 MCM4P33991 863 aa11.59□□□□□ -0.55
USP8-203ENST00000419830 RBM25P49756 843 aaKnown RBP11.59□□□□□ -0.55
USP8-203ENST00000419830 ZRANB1Q9UGI0 708 aa11.59□□□□□ -0.55
USP8-203ENST00000419830 DLC1Q96QB1 1528 aa11.59□□□□□ -0.55
USP8-203ENST00000419830 CPSF1Q10570 1443 aaKnown RBP11.59□□□□□ -0.55
USP8-203ENST00000419830 SIRT2Q8IXJ6 389 aa11.58□□□□□ -0.56
USP8-203ENST00000419830 ARHGAP45Q92619 1136 aa11.58□□□□□ -0.56
USP8-203ENST00000419830 A2ML1A8K2U0 1454 aa11.58□□□□□ -0.56
USP8-203ENST00000419830 DDIT3P35638 169 aa11.58□□□□□ -0.56
USP8-203ENST00000419830 STAG3Q9UJ98 1225 aa11.58□□□□□ -0.56
USP8-203ENST00000419830 SETD1AO15047 1707 aaKnown RBP11.57□□□□□ -0.56
USP8-203ENST00000419830 NME9Q86XW9 330 aa11.57□□□□□ -0.56
USP8-203ENST00000419830 MBIPQ9NS73 344 aa11.57□□□□□ -0.56
USP8-203ENST00000419830 CHMP5Q9NZZ3 219 aa11.57□□□□□ -0.56
USP8-203ENST00000419830 PTCH1Q13635 1447 aa11.57□□□□□ -0.56
USP8-203ENST00000419830 KIF2CQ99661 725 aa11.57□□□□□ -0.56
USP8-203ENST00000419830 C1orf115Q9H7X2 142 aa11.57□□□□□ -0.56
USP8-203ENST00000419830 IFT57Q9NWB7 429 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms