RNA–Protein interactions for RNA: ENST00000419606.5

ATG4B-208, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 553 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-208ENST00000419606 TTC21BQ7Z4L5 1316 aa17.63■□□□□ 0.41
ATG4B-208ENST00000419606 EDC4Q6P2E9 1401 aaKnown RBP17.63■□□□□ 0.41
ATG4B-208ENST00000419606 ZRANB1Q9UGI0 708 aa17.62■□□□□ 0.41
ATG4B-208ENST00000419606 NPHP3Q7Z494 1330 aa17.62■□□□□ 0.41
ATG4B-208ENST00000419606 AHDC1Q5TGY3 1603 aaPredicted RBP17.61■□□□□ 0.41
ATG4B-208ENST00000419606 PAK3O75914 559 aaPredicted RBP17.61■□□□□ 0.41
ATG4B-208ENST00000419606 FBXO41Q8TF61 875 aa17.61■□□□□ 0.41
ATG4B-208ENST00000419606 KNSTRNQ9Y448 316 aa17.61■□□□□ 0.41
ATG4B-208ENST00000419606 PIK3C2AO00443 1686 aa17.61■□□□□ 0.41
ATG4B-208ENST00000419606 PHLPP1O60346 1717 aa17.61■□□□□ 0.41
ATG4B-208ENST00000419606 KIF20BQ96Q89 1820 aa17.61■□□□□ 0.41
ATG4B-208ENST00000419606 NME9Q86XW9 330 aa17.6■□□□□ 0.41
ATG4B-208ENST00000419606 SOS2Q07890 1332 aaPredicted RBP17.6■□□□□ 0.41
ATG4B-208ENST00000419606 ALS2Q96Q42 1657 aa17.59■□□□□ 0.41
ATG4B-208ENST00000419606 AMER1Q5JTC6 1135 aaPredicted RBP17.59■□□□□ 0.41
ATG4B-208ENST00000419606 NUTM2GQ5VZR2 741 aa17.59■□□□□ 0.41
ATG4B-208ENST00000419606 FYB1O15117 783 aa17.58■□□□□ 0.4
ATG4B-208ENST00000419606 GGNBP2Q9H3C7 697 aa17.58■□□□□ 0.4
ATG4B-208ENST00000419606 MARF1Q9Y4F3 1742 aaKnown RBP17.58■□□□□ 0.4
ATG4B-208ENST00000419606 COL16A1Q07092 1604 aaPredicted RBP17.58■□□□□ 0.4
ATG4B-208ENST00000419606 CC2D1BQ5T0F9 858 aaKnown RBP17.57■□□□□ 0.4
ATG4B-208ENST00000419606 SBNO1A3KN83 1393 aa17.56■□□□□ 0.4
ATG4B-208ENST00000419606 SPATA31A3Q5VYP0 1347 aa17.56■□□□□ 0.4
ATG4B-208ENST00000419606 PLEKHG5O94827 1062 aa17.56■□□□□ 0.4
ATG4B-208ENST00000419606 LMOD2Q6P5Q4 547 aa17.56■□□□□ 0.4
ATG4B-208ENST00000419606 TNS3Q68CZ2 1445 aa17.55■□□□□ 0.4
ATG4B-208ENST00000419606 CGNL1Q0VF96 1302 aa17.55■□□□□ 0.4
ATG4B-208ENST00000419606 TTC21AQ8NDW8 1320 aa17.55■□□□□ 0.4
ATG4B-208ENST00000419606 DIEXFQ68CQ4 756 aaKnown RBP17.55■□□□□ 0.4
ATG4B-208ENST00000419606 ABTB2Q8N961 1025 aa17.55■□□□□ 0.4
ATG4B-208ENST00000419606 ANKRD26Q9UPS8 1709 aa17.55■□□□□ 0.4
ATG4B-208ENST00000419606 BRD4O60885 1362 aaPredicted RBP17.54■□□□□ 0.4
ATG4B-208ENST00000419606 HSPA1LP34931 641 aa17.52■□□□□ 0.4
ATG4B-208ENST00000419606 NLRP6P59044 892 aa17.52■□□□□ 0.4
ATG4B-208ENST00000419606 OVOS2A0A0J9YW53 1432 aa17.52■□□□□ 0.4
ATG4B-208ENST00000419606 OVOS2Q6IE36 1432 aa17.52■□□□□ 0.4
ATG4B-208ENST00000419606 USP54Q70EL1 1684 aa17.52■□□□□ 0.39
ATG4B-208ENST00000419606 FBLN1P23142 703 aa17.51■□□□□ 0.39
ATG4B-208ENST00000419606 MED1Q15648 1581 aaPredicted RBP17.51■□□□□ 0.39
ATG4B-208ENST00000419606 USP31Q70CQ4 1352 aa17.51■□□□□ 0.39
ATG4B-208ENST00000419606 NPC1L1Q9UHC9 1359 aa17.51■□□□□ 0.39
ATG4B-208ENST00000419606 CRYBG1Q9Y4K1 1723 aa17.5■□□□□ 0.39
ATG4B-208ENST00000419606 TNNT2P45379 298 aaPredicted RBP17.5■□□□□ 0.39
ATG4B-208ENST00000419606 CABLES1Q8TDN4 633 aa17.5■□□□□ 0.39
ATG4B-208ENST00000419606 LRRC59Q96AG4 307 aaKnown RBP17.5■□□□□ 0.39
ATG4B-208ENST00000419606 MORC1Q86VD1 984 aa17.49■□□□□ 0.39
ATG4B-208ENST00000419606 COG3Q96JB2 828 aa17.49■□□□□ 0.39
ATG4B-208ENST00000419606 NSD2O96028 1365 aa17.49■□□□□ 0.39
ATG4B-208ENST00000419606 PHRF1Q9P1Y6 1649 aaKnown RBP17.48■□□□□ 0.39
ATG4B-208ENST00000419606 SOX12O15370 315 aa17.48■□□□□ 0.39
ATG4B-208ENST00000419606 ARHGEF10O15013 1369 aa17.48■□□□□ 0.39
ATG4B-208ENST00000419606 PNPLA6Q8IY17 1366 aa17.48■□□□□ 0.39
ATG4B-208ENST00000419606 ABCA3Q99758 1704 aa17.47■□□□□ 0.39
ATG4B-208ENST00000419606 NLRP13Q86W25 1043 aa17.47■□□□□ 0.39
ATG4B-208ENST00000419606 PRKRIP1Q9H875 184 aaPredicted RBP17.47■□□□□ 0.39
ATG4B-208ENST00000419606 PARD3Q8TEW0 1356 aa17.47■□□□□ 0.39
ATG4B-208ENST00000419606 SLIT3O75094 1523 aa17.47■□□□□ 0.39
ATG4B-208ENST00000419606 USP19O94966 1318 aa17.47■□□□□ 0.39
ATG4B-208ENST00000419606 COL22A1Q8NFW1 1626 aaPredicted RBP17.46■□□□□ 0.39
ATG4B-208ENST00000419606 SHPRHQ149N8 1683 aa17.45■□□□□ 0.38
ATG4B-208ENST00000419606 ANP32CO43423 234 aa17.44■□□□□ 0.38
ATG4B-208ENST00000419606 NFAT5O94916 1531 aa17.43■□□□□ 0.38
ATG4B-208ENST00000419606 GCP02774 474 aa17.43■□□□□ 0.38
ATG4B-208ENST00000419606 MAP2P11137 1827 aaKnown RBP17.42■□□□□ 0.38
ATG4B-208ENST00000419606 RRS1Q15050 365 aaKnown RBP17.42■□□□□ 0.38
ATG4B-208ENST00000419606 MIER1Q8N108 512 aa17.42■□□□□ 0.38
ATG4B-208ENST00000419606 PPP2R1AP30153 589 aa17.41■□□□□ 0.38
ATG4B-208ENST00000419606 ZC3H6P61129 1189 aaKnown RBP17.41■□□□□ 0.38
ATG4B-208ENST00000419606 RALBP1Q15311 655 aa17.41■□□□□ 0.38
ATG4B-208ENST00000419606 JCADQ9P266 1359 aa17.4■□□□□ 0.38
ATG4B-208ENST00000419606 EMILIN1Q9Y6C2 1016 aa17.4■□□□□ 0.38
ATG4B-208ENST00000419606 PEAK1Q9H792 1746 aa17.4■□□□□ 0.38
ATG4B-208ENST00000419606 LTN1O94822 1766 aa17.4■□□□□ 0.38
ATG4B-208ENST00000419606 ZBTB7CA1YPR0 619 aa17.39■□□□□ 0.37
ATG4B-208ENST00000419606 NUTM2BA6NNL0 878 aaPredicted RBP17.39■□□□□ 0.37
ATG4B-208ENST00000419606 NUTM2EB1AL46 878 aaPredicted RBP17.39■□□□□ 0.37
ATG4B-208ENST00000419606 NUTM2AQ8IVF1 878 aaPredicted RBP17.39■□□□□ 0.37
ATG4B-208ENST00000419606 POLKQ9UBT6 870 aa17.39■□□□□ 0.37
ATG4B-208ENST00000419606 AATKQ6ZMQ8 1374 aa17.39■□□□□ 0.37
ATG4B-208ENST00000419606 CCDC184Q52MB2 194 aa17.38■□□□□ 0.37
ATG4B-208ENST00000419606 KCNH5Q8NCM2 988 aa17.38■□□□□ 0.37
ATG4B-208ENST00000419606 MAP3K19Q56UN5 1328 aa17.38■□□□□ 0.37
ATG4B-208ENST00000419606 HAP1P54257 671 aaPredicted RBP17.37■□□□□ 0.37
ATG4B-208ENST00000419606 MYBBP1AQ9BQG0 1328 aaKnown RBP17.37■□□□□ 0.37
ATG4B-208ENST00000419606 PPM1GO15355 546 aaPredicted RBP17.36■□□□□ 0.37
ATG4B-208ENST00000419606 MTHFSP49914 203 aa17.36■□□□□ 0.37
ATG4B-208ENST00000419606 CHRNA2Q15822 529 aa17.36■□□□□ 0.37
ATG4B-208ENST00000419606 ARHGEF25Q86VW2 580 aa17.36■□□□□ 0.37
ATG4B-208ENST00000419606 KIAA0232Q92628 1395 aa17.36■□□□□ 0.37
ATG4B-208ENST00000419606 LRP6O75581 1613 aa17.36■□□□□ 0.37
ATG4B-208ENST00000419606 COL18A1P39060 1754 aa17.35■□□□□ 0.37
ATG4B-208ENST00000419606 RGPD5Q99666 1765 aa17.35■□□□□ 0.37
ATG4B-208ENST00000419606 ADAMTS2O95450 1211 aa17.34■□□□□ 0.37
ATG4B-208ENST00000419606 SMG6Q86US8 1419 aaKnown RBP17.34■□□□□ 0.37
ATG4B-208ENST00000419606 CPDO75976 1380 aa17.32■□□□□ 0.36
ATG4B-208ENST00000419606 FAM83GA6ND36 823 aa17.32■□□□□ 0.36
ATG4B-208ENST00000419606 AMPHP49418 695 aa17.32■□□□□ 0.36
ATG4B-208ENST00000419606 AXIN2Q9Y2T1 843 aa17.32■□□□□ 0.36
ATG4B-208ENST00000419606 SPATA31A6Q5VVP1 1343 aa17.31■□□□□ 0.36
ATG4B-208ENST00000419606 HOXC9P31274 260 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms