RNA–Protein interactions for RNA: ENST00000419499.1

LINC00402-201, long intergenic non-protein coding RNA 402, humanhuman

TSL 2 BASIC

Gene LINC00402, Length 3,340 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00402-201ENST00000419499 SSH2Q76I76 1423 aa12.93□□□□□ -0.34
LINC00402-201ENST00000419499 GOLGA2Q08379 1002 aa12.93□□□□□ -0.34
LINC00402-201ENST00000419499 PEAK1Q9H792 1746 aa12.93□□□□□ -0.34
LINC00402-201ENST00000419499 CCDC27Q2M243 656 aa12.92□□□□□ -0.34
LINC00402-201ENST00000419499 B4GALNT3Q6L9W6 998 aa12.92□□□□□ -0.34
LINC00402-201ENST00000419499 PIK3C2AO00443 1686 aa12.92□□□□□ -0.34
LINC00402-201ENST00000419499 AATKQ6ZMQ8 1374 aa12.92□□□□□ -0.34
LINC00402-201ENST00000419499 TXNDC2Q86VQ3 553 aa12.92□□□□□ -0.34
LINC00402-201ENST00000419499 HDGFL2Q7Z4V5 671 aaPredicted RBP12.91□□□□□ -0.34
LINC00402-201ENST00000419499 PLEKHF1Q96S99 279 aa12.91□□□□□ -0.34
LINC00402-201ENST00000419499 OVOS2A0A0J9YW53 1432 aa12.91□□□□□ -0.34
LINC00402-201ENST00000419499 OVOS2Q6IE36 1432 aa12.91□□□□□ -0.34
LINC00402-201ENST00000419499 RUNDC1Q96C34 613 aa12.91□□□□□ -0.34
LINC00402-201ENST00000419499 GGNBP2Q9H3C7 697 aa12.91□□□□□ -0.34
LINC00402-201ENST00000419499 WWC1Q8IX03 1113 aa12.91□□□□□ -0.34
LINC00402-201ENST00000419499 DLG5Q8TDM6 1919 aa12.9□□□□□ -0.34
LINC00402-201ENST00000419499 TNNT2P45379 298 aaPredicted RBP12.9□□□□□ -0.34
LINC00402-201ENST00000419499 PIK3R4Q99570 1358 aa12.89□□□□□ -0.35
LINC00402-201ENST00000419499 NWD1Q149M9 1564 aa12.89□□□□□ -0.35
LINC00402-201ENST00000419499 E9PSI1 815 aa12.89□□□□□ -0.35
LINC00402-201ENST00000419499 CFAP53Q96M91 514 aa12.88□□□□□ -0.35
LINC00402-201ENST00000419499 TBX22Q9Y458 520 aa12.88□□□□□ -0.35
LINC00402-201ENST00000419499 NUDT16Q96DE0 195 aaKnown RBP12.88□□□□□ -0.35
LINC00402-201ENST00000419499 USP6P35125 1406 aa12.88□□□□□ -0.35
LINC00402-201ENST00000419499 EXOC6Q8TAG9 804 aa12.88□□□□□ -0.35
LINC00402-201ENST00000419499 TCP11L2Q8N4U5 519 aa12.87□□□□□ -0.35
LINC00402-201ENST00000419499 CCDC61Q9Y6R9 512 aa12.87□□□□□ -0.35
LINC00402-201ENST00000419499 NCKAP5LQ9HCH0 1330 aa12.86□□□□□ -0.35
LINC00402-201ENST00000419499 ANKARQ7Z5J8 1434 aa12.86□□□□□ -0.35
LINC00402-201ENST00000419499 SETD1BQ9UPS6 1966 aaKnown RBP12.85□□□□□ -0.35
LINC00402-201ENST00000419499 WDR63Q8IWG1 891 aa12.85□□□□□ -0.35
LINC00402-201ENST00000419499 POLKQ9UBT6 870 aa12.85□□□□□ -0.35
LINC00402-201ENST00000419499 PLEKHG3A1L390 1219 aa12.85□□□□□ -0.35
LINC00402-201ENST00000419499 USP31Q70CQ4 1352 aa12.84□□□□□ -0.35
LINC00402-201ENST00000419499 THEMISQ8N1K5 641 aaPredicted RBP12.84□□□□□ -0.35
LINC00402-201ENST00000419499 PLIN1O60240 522 aa12.84□□□□□ -0.35
LINC00402-201ENST00000419499 C20orf194Q5TEA3 1177 aa12.84□□□□□ -0.35
LINC00402-201ENST00000419499 EID1Q9Y6B2 187 aa12.84□□□□□ -0.35
LINC00402-201ENST00000419499 RBM19Q9Y4C8 960 aaKnown RBP12.83□□□□□ -0.36
LINC00402-201ENST00000419499 PHRF1Q9P1Y6 1649 aaKnown RBP12.82□□□□□ -0.36
LINC00402-201ENST00000419499 TRHP20396 242 aaPredicted RBP12.82□□□□□ -0.36
LINC00402-201ENST00000419499 NME9Q86XW9 330 aa12.82□□□□□ -0.36
LINC00402-201ENST00000419499 CCDC136Q96JN2 1154 aa12.82□□□□□ -0.36
LINC00402-201ENST00000419499 SLC26A8Q96RN1 970 aa12.82□□□□□ -0.36
LINC00402-201ENST00000419499 AMOTL2Q9Y2J4 779 aa12.82□□□□□ -0.36
LINC00402-201ENST00000419499 CRBNQ96SW2 442 aa12.81□□□□□ -0.36
LINC00402-201ENST00000419499 ZNF692Q9BU19 519 aaPredicted RBP12.81□□□□□ -0.36
LINC00402-201ENST00000419499 TRIM35Q9UPQ4 493 aa12.81□□□□□ -0.36
LINC00402-201ENST00000419499 KDM2BQ8NHM5 1336 aa12.81□□□□□ -0.36
LINC00402-201ENST00000419499 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.81□□□□□ -0.36
LINC00402-201ENST00000419499 RSPH6AQ9H0K4 717 aa12.81□□□□□ -0.36
LINC00402-201ENST00000419499 U2AF1L5P0DN76 240 aaPredicted RBP12.8□□□□□ -0.36
LINC00402-201ENST00000419499 U2AF1Q01081 240 aaKnown RBP eCLIP12.8□□□□□ -0.36
LINC00402-201ENST00000419499 VIRMAQ69YN4 1812 aaKnown RBP12.8□□□□□ -0.36
LINC00402-201ENST00000419499 DIAPH1O60610 1272 aaKnown RBP12.8□□□□□ -0.36
LINC00402-201ENST00000419499 ZRANB1Q9UGI0 708 aa12.8□□□□□ -0.36
LINC00402-201ENST00000419499 RRP7AQ9Y3A4 280 aaKnown RBP12.8□□□□□ -0.36
LINC00402-201ENST00000419499 ACEP12821 1306 aa12.79□□□□□ -0.36
LINC00402-201ENST00000419499 IL13P35225 146 aa12.79□□□□□ -0.36
LINC00402-201ENST00000419499 LRRC37A3O60309 1634 aa12.79□□□□□ -0.36
LINC00402-201ENST00000419499 TTC21BQ7Z4L5 1316 aa12.79□□□□□ -0.36
LINC00402-201ENST00000419499 IL16Q14005 1332 aa12.79□□□□□ -0.36
LINC00402-201ENST00000419499 TMPOP42166 694 aaKnown RBP12.78□□□□□ -0.36
LINC00402-201ENST00000419499 EMILIN1Q9Y6C2 1016 aa12.78□□□□□ -0.36
LINC00402-201ENST00000419499 LTN1O94822 1766 aa12.78□□□□□ -0.36
LINC00402-201ENST00000419499 BCAR3O75815 825 aa12.77□□□□□ -0.36
LINC00402-201ENST00000419499 FBLN1P23142 703 aa12.77□□□□□ -0.36
LINC00402-201ENST00000419499 FCHSD2O94868 740 aa12.77□□□□□ -0.37
LINC00402-201ENST00000419499 TRPM3Q9HCF6 1732 aaPredicted RBP12.77□□□□□ -0.37
LINC00402-201ENST00000419499 FANCIQ9NVI1 1328 aa12.76□□□□□ -0.37
LINC00402-201ENST00000419499 ADGRL3Q9HAR2 1447 aa12.76□□□□□ -0.37
LINC00402-201ENST00000419499 STRCP1A6NGW2 1772 aa12.76□□□□□ -0.37
LINC00402-201ENST00000419499 RARSP54136 660 aaKnown RBP12.75□□□□□ -0.37
LINC00402-201ENST00000419499 TTC21AQ8NDW8 1320 aa12.75□□□□□ -0.37
LINC00402-201ENST00000419499 KCNA6P17658 529 aa12.75□□□□□ -0.37
LINC00402-201ENST00000419499 NFAT5O94916 1531 aa12.75□□□□□ -0.37
LINC00402-201ENST00000419499 COG3Q96JB2 828 aa12.75□□□□□ -0.37
LINC00402-201ENST00000419499 CT47B1P0C2W7 299 aaPredicted RBP12.74□□□□□ -0.37
LINC00402-201ENST00000419499 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.74□□□□□ -0.37
LINC00402-201ENST00000419499 DNAJC5Q9H3Z4 198 aa12.74□□□□□ -0.37
LINC00402-201ENST00000419499 NPHP4O75161 1426 aaPredicted RBP12.74□□□□□ -0.37
LINC00402-201ENST00000419499 U2SURPO15042 1029 aaKnown RBP12.73□□□□□ -0.37
LINC00402-201ENST00000419499 PDE3AQ14432 1141 aa12.73□□□□□ -0.37
LINC00402-201ENST00000419499 NEUROD2Q15784 382 aa12.73□□□□□ -0.37
LINC00402-201ENST00000419499 KIF1AQ12756 1690 aa12.72□□□□□ -0.37
LINC00402-201ENST00000419499 CAMTA1Q9Y6Y1 1673 aa12.72□□□□□ -0.37
LINC00402-201ENST00000419499 MYH16Q9H6N6 1097 aa12.72□□□□□ -0.37
LINC00402-201ENST00000419499 PNNQ9H307 717 aaKnown RBP12.72□□□□□ -0.37
LINC00402-201ENST00000419499 MAPK8IP3Q9UPT6 1336 aa12.72□□□□□ -0.37
LINC00402-201ENST00000419499 RRS1Q15050 365 aaKnown RBP12.71□□□□□ -0.37
LINC00402-201ENST00000419499 KDRP35968 1356 aa12.71□□□□□ -0.38
LINC00402-201ENST00000419499 PRKAR2BP31323 418 aa12.71□□□□□ -0.38
LINC00402-201ENST00000419499 PHACTR3Q96KR7 559 aa12.7□□□□□ -0.38
LINC00402-201ENST00000419499 ARHGEF10O15013 1369 aa12.7□□□□□ -0.38
LINC00402-201ENST00000419499 KIF24Q5T7B8 1368 aa12.7□□□□□ -0.38
LINC00402-201ENST00000419499 ALS2Q96Q42 1657 aa12.7□□□□□ -0.38
LINC00402-201ENST00000419499 SLIT3O75094 1523 aa12.7□□□□□ -0.38
LINC00402-201ENST00000419499 SBNO1A3KN83 1393 aa12.69□□□□□ -0.38
LINC00402-201ENST00000419499 NFE2L2Q16236 605 aa12.69□□□□□ -0.38
LINC00402-201ENST00000419499 ANKLE2Q86XL3 938 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms