RNA–Protein interactions for RNA: ENST00000418224.7

PMS1-206, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5 BASIC

Gene PMS1, Length 3,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-206ENST00000418224 DDIT3P35638 169 aa21.77■■□□□ 1.07
PMS1-206ENST00000418224 RAB3GAP1Q15042 981 aa21.77■■□□□ 1.07
PMS1-206ENST00000418224 SMAP1Q8IYB5 467 aaPredicted RBP21.77■■□□□ 1.07
PMS1-206ENST00000418224 U2SURPO15042 1029 aaKnown RBP21.76■■□□□ 1.07
PMS1-206ENST00000418224 FGD1P98174 961 aa21.76■■□□□ 1.07
PMS1-206ENST00000418224 FANCAO15360 1455 aa21.76■■□□□ 1.07
PMS1-206ENST00000418224 SBNO2Q9Y2G9 1366 aa21.76■■□□□ 1.07
PMS1-206ENST00000418224 TERF1P54274 439 aa21.75■■□□□ 1.07
PMS1-206ENST00000418224 ITPRIPQ8IWB1 547 aa21.75■■□□□ 1.07
PMS1-206ENST00000418224 SHPRHQ149N8 1683 aa21.75■■□□□ 1.07
PMS1-206ENST00000418224 SAFB2Q14151 953 aaKnown RBP eCLIP21.75■■□□□ 1.07
PMS1-206ENST00000418224 SSFA2P28290 1259 aa21.74■■□□□ 1.07
PMS1-206ENST00000418224 IQSEC2Q5JU85 1478 aa21.74■■□□□ 1.07
PMS1-206ENST00000418224 KIF1BO60333 1816 aa21.74■■□□□ 1.07
PMS1-206ENST00000418224 CCDC27Q2M243 656 aa21.73■■□□□ 1.07
PMS1-206ENST00000418224 SMC5Q8IY18 1101 aa21.73■■□□□ 1.07
PMS1-206ENST00000418224 GOLGA6L22H0YM25 854 aa21.73■■□□□ 1.07
PMS1-206ENST00000418224 EXOSC9Q06265 439 aaKnown RBP21.73■■□□□ 1.07
PMS1-206ENST00000418224 VWDEQ8N2E2 1590 aa21.72■■□□□ 1.07
PMS1-206ENST00000418224 GGT6Q6P531 493 aa21.72■■□□□ 1.07
PMS1-206ENST00000418224 CIZ1Q9ULV3 898 aaPredicted RBP21.72■■□□□ 1.07
PMS1-206ENST00000418224 ADGRL1O94910 1474 aa21.71■■□□□ 1.07
PMS1-206ENST00000418224 ZNF518AQ6AHZ1 1483 aa21.71■■□□□ 1.07
PMS1-206ENST00000418224 C14orf93Q9H972 538 aaKnown RBP21.71■■□□□ 1.07
PMS1-206ENST00000418224 CABP2Q9NPB3 220 aa21.7■■□□□ 1.06
PMS1-206ENST00000418224 MROH2AA6NES4 1674 aa21.7■■□□□ 1.06
PMS1-206ENST00000418224 CFAP65Q6ZU64 1925 aaKnown RBP21.7■■□□□ 1.06
PMS1-206ENST00000418224 TRIM27P14373 513 aa21.69■■□□□ 1.06
PMS1-206ENST00000418224 CD2BP2O95400 341 aaKnown RBP21.69■■□□□ 1.06
PMS1-206ENST00000418224 PTMSP20962 102 aa21.69■■□□□ 1.06
PMS1-206ENST00000418224 NOL7Q9UMY1 257 aaKnown RBP21.69■■□□□ 1.06
PMS1-206ENST00000418224 ZMYM3Q14202 1370 aa21.69■■□□□ 1.06
PMS1-206ENST00000418224 CAVIN1Q6NZI2 390 aaKnown RBP21.69■■□□□ 1.06
PMS1-206ENST00000418224 SSH1Q8WYL5 1049 aa21.68■■□□□ 1.06
PMS1-206ENST00000418224 SNX21Q969T3 373 aa21.68■■□□□ 1.06
PMS1-206ENST00000418224 EIF2AK3Q9NZJ5 1116 aaKnown RBP21.68■■□□□ 1.06
PMS1-206ENST00000418224 UHRF1BP1LA0JNW5 1464 aa21.67■■□□□ 1.06
PMS1-206ENST00000418224 INO80Q9ULG1 1556 aaPredicted RBP21.67■■□□□ 1.06
PMS1-206ENST00000418224 NCOA3Q9Y6Q9 1424 aa21.67■■□□□ 1.06
PMS1-206ENST00000418224 EFCAB6Q5THR3 1501 aa21.67■■□□□ 1.06
PMS1-206ENST00000418224 DYNC1I1O14576 645 aa21.66■■□□□ 1.06
PMS1-206ENST00000418224 EVC2Q86UK5 1308 aa21.66■■□□□ 1.06
PMS1-206ENST00000418224 RBM42Q9BTD8 480 aaKnown RBP21.66■■□□□ 1.06
PMS1-206ENST00000418224 ZNF500O60304 480 aaPredicted RBP21.66■■□□□ 1.06
PMS1-206ENST00000418224 KLHL40Q2TBA0 621 aa21.66■■□□□ 1.06
PMS1-206ENST00000418224 MTERF4Q7Z6M4 381 aaKnown RBP21.66■■□□□ 1.06
PMS1-206ENST00000418224 RBSNQ9H1K0 784 aa21.66■■□□□ 1.06
PMS1-206ENST00000418224 DDX19BQ9UMR2 479 aa21.66■■□□□ 1.06
PMS1-206ENST00000418224 MROH1Q8NDA8 1641 aa21.65■■□□□ 1.06
PMS1-206ENST00000418224 MYO3AQ8NEV4 1616 aa21.65■■□□□ 1.06
PMS1-206ENST00000418224 NEURL4Q96JN8 1562 aa21.65■■□□□ 1.06
PMS1-206ENST00000418224 GGNBP2Q9H3C7 697 aa21.65■■□□□ 1.06
PMS1-206ENST00000418224 NOB1Q9ULX3 412 aaKnown RBP21.65■■□□□ 1.06
PMS1-206ENST00000418224 NRXN1Q9ULB1 1477 aa21.65■■□□□ 1.06
PMS1-206ENST00000418224 MCTP1Q6DN14 999 aa21.65■■□□□ 1.06
PMS1-206ENST00000418224 QRICH2Q9H0J4 1663 aa21.65■■□□□ 1.06
PMS1-206ENST00000418224 ARAP3Q8WWN8 1544 aa21.64■■□□□ 1.05
PMS1-206ENST00000418224 BAG4O95429 457 aaKnown RBP21.64■■□□□ 1.05
PMS1-206ENST00000418224 RBM25P49756 843 aaKnown RBP21.64■■□□□ 1.05
PMS1-206ENST00000418224 ATF7IPQ6VMQ6 1270 aa21.64■■□□□ 1.05
PMS1-206ENST00000418224 TMPOP42166 694 aaKnown RBP21.64■■□□□ 1.05
PMS1-206ENST00000418224 JARID2Q92833 1246 aaPredicted RBP21.64■■□□□ 1.05
PMS1-206ENST00000418224 PPRC1Q5VV67 1664 aaKnown RBP21.63■■□□□ 1.05
PMS1-206ENST00000418224 TMEM57Q8N5G2 664 aa21.63■■□□□ 1.05
PMS1-206ENST00000418224 STK26Q9P289 416 aa21.63■■□□□ 1.05
PMS1-206ENST00000418224 IFT172Q9UG01 1749 aa21.62■■□□□ 1.05
PMS1-206ENST00000418224 GAS2L2Q8NHY3 880 aa21.62■■□□□ 1.05
PMS1-206ENST00000418224 SRPK2P78362 688 aaKnown RBP21.62■■□□□ 1.05
PMS1-206ENST00000418224 HDAC1Q13547 482 aaPredicted RBP21.61■■□□□ 1.05
PMS1-206ENST00000418224 TSC1Q92574 1164 aa21.61■■□□□ 1.05
PMS1-206ENST00000418224 ZKSCAN5Q9Y2L8 839 aa21.61■■□□□ 1.05
PMS1-206ENST00000418224 DMTNQ08495 405 aa21.61■■□□□ 1.05
PMS1-206ENST00000418224 ZSCAN23Q3MJ62 389 aa21.61■■□□□ 1.05
PMS1-206ENST00000418224 LNPKQ9C0E8 428 aa21.61■■□□□ 1.05
PMS1-206ENST00000418224 K7ELQ4 463 aaPredicted RBP21.61■■□□□ 1.05
PMS1-206ENST00000418224 PRIM1P49642 420 aaKnown RBP21.61■■□□□ 1.05
PMS1-206ENST00000418224 CSPP1Q1MSJ5 1256 aa21.61■■□□□ 1.05
PMS1-206ENST00000418224 HS1BP3Q53T59 392 aa21.61■■□□□ 1.05
PMS1-206ENST00000418224 SASS6Q6UVJ0 657 aa21.61■■□□□ 1.05
PMS1-206ENST00000418224 ANKRD36BQ8N2N9 1353 aa21.61■■□□□ 1.05
PMS1-206ENST00000418224 CT47B1P0C2W7 299 aaPredicted RBP21.6■■□□□ 1.05
PMS1-206ENST00000418224 CCDC94Q9BW85 323 aaPredicted RBP21.6■■□□□ 1.05
PMS1-206ENST00000418224 SETBP1Q9Y6X0 1596 aa21.6■■□□□ 1.05
PMS1-206ENST00000418224 TRIM35Q9UPQ4 493 aa21.6■■□□□ 1.05
PMS1-206ENST00000418224 ADGRB3O60242 1522 aa21.59■■□□□ 1.05
PMS1-206ENST00000418224 CBX1P83916 185 aa21.59■■□□□ 1.05
PMS1-206ENST00000418224 DNTTIP2Q5QJE6 756 aaKnown RBP21.59■■□□□ 1.05
PMS1-206ENST00000418224 ZSCAN20P17040 1043 aaPredicted RBP21.58■■□□□ 1.05
PMS1-206ENST00000418224 RBM27Q9P2N5 1060 aaKnown RBP21.58■■□□□ 1.05
PMS1-206ENST00000418224 BBXQ8WY36 941 aaPredicted RBP21.57■■□□□ 1.04
PMS1-206ENST00000418224 KIF2CQ99661 725 aa21.57■■□□□ 1.04
PMS1-206ENST00000418224 NPATQ14207 1427 aa21.57■■□□□ 1.04
PMS1-206ENST00000418224 ZNF445P59923 1031 aa21.57■■□□□ 1.04
PMS1-206ENST00000418224 ADGRB1O14514 1584 aa21.56■■□□□ 1.04
PMS1-206ENST00000418224 PDE4CQ08493 712 aa21.56■■□□□ 1.04
PMS1-206ENST00000418224 ABCA9Q8IUA7 1624 aa21.56■■□□□ 1.04
PMS1-206ENST00000418224 CD109Q6YHK3 1445 aa21.56■■□□□ 1.04
PMS1-206ENST00000418224 PDLIM2Q96JY6 352 aa21.56■■□□□ 1.04
PMS1-206ENST00000418224 PLEKHF1Q96S99 279 aa21.56■■□□□ 1.04
PMS1-206ENST00000418224 NSD2O96028 1365 aa21.56■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms