RNA–Protein interactions for RNA: ENST00000418185.6

GTF2IRD2B-202, Transcript of GTF2I repeat domain containing 2B, humanhuman

TSL 1 (best)

Gene GTF2IRD2B, Length 3,485 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2IRD2B-202ENST00000418185 WDR7Q9Y4E6 1490 aa17.71■□□□□ 0.43
GTF2IRD2B-202ENST00000418185 C14orf93Q9H972 538 aaKnown RBP17.71■□□□□ 0.43
GTF2IRD2B-202ENST00000418185 SSFA2P28290 1259 aa17.71■□□□□ 0.43
GTF2IRD2B-202ENST00000418185 XRCC6P12956 609 aaKnown RBP eCLIP17.7■□□□□ 0.42
GTF2IRD2B-202ENST00000418185 CAVIN1Q6NZI2 390 aaKnown RBP17.7■□□□□ 0.42
GTF2IRD2B-202ENST00000418185 DDX54Q8TDD1 881 aaKnown RBP17.7■□□□□ 0.42
GTF2IRD2B-202ENST00000418185 OTUD7AQ8TE49 926 aaPredicted RBP17.7■□□□□ 0.42
GTF2IRD2B-202ENST00000418185 ADGRL1O94910 1474 aa17.69■□□□□ 0.42
GTF2IRD2B-202ENST00000418185 ZMYM4Q5VZL5 1548 aa17.69■□□□□ 0.42
GTF2IRD2B-202ENST00000418185 FAM69CQ0P6D2 419 aa17.69■□□□□ 0.42
GTF2IRD2B-202ENST00000418185 NGDNQ8NEJ9 315 aaKnown RBP17.69■□□□□ 0.42
GTF2IRD2B-202ENST00000418185 EXOC6BQ9Y2D4 811 aa17.69■□□□□ 0.42
GTF2IRD2B-202ENST00000418185 CASC1Q6TDU7 716 aa17.69■□□□□ 0.42
GTF2IRD2B-202ENST00000418185 KDM5DQ9BY66 1539 aa17.69■□□□□ 0.42
GTF2IRD2B-202ENST00000418185 AMPHP49418 695 aa17.68■□□□□ 0.42
GTF2IRD2B-202ENST00000418185 C8orf58Q8NAV2 365 aa17.68■□□□□ 0.42
GTF2IRD2B-202ENST00000418185 RRAGDQ9NQL2 400 aaPredicted RBP17.68■□□□□ 0.42
GTF2IRD2B-202ENST00000418185 ERCC6L2Q5T890 1561 aa17.68■□□□□ 0.42
GTF2IRD2B-202ENST00000418185 FANCAO15360 1455 aa17.68■□□□□ 0.42
GTF2IRD2B-202ENST00000418185 USP19O94966 1318 aa17.68■□□□□ 0.42
GTF2IRD2B-202ENST00000418185 KIF16BQ96L93 1317 aa17.68■□□□□ 0.42
GTF2IRD2B-202ENST00000418185 SLC4A2P04920 1241 aa17.68■□□□□ 0.42
GTF2IRD2B-202ENST00000418185 PLCH2O75038 1416 aa17.67■□□□□ 0.42
GTF2IRD2B-202ENST00000418185 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.67■□□□□ 0.42
GTF2IRD2B-202ENST00000418185 TNPO1Q92973 898 aaKnown RBP17.67■□□□□ 0.42
GTF2IRD2B-202ENST00000418185 ANO2Q9NQ90 1003 aa17.67■□□□□ 0.42
GTF2IRD2B-202ENST00000418185 TRIM35Q9UPQ4 493 aa17.67■□□□□ 0.42
GTF2IRD2B-202ENST00000418185 CALD1Q05682 793 aaKnown RBP17.67■□□□□ 0.42
GTF2IRD2B-202ENST00000418185 SAMD9LQ8IVG5 1584 aa17.67■□□□□ 0.42
GTF2IRD2B-202ENST00000418185 FKBP5Q13451 457 aaPredicted RBP17.66■□□□□ 0.42
GTF2IRD2B-202ENST00000418185 PRPF40AO75400 957 aaKnown RBP17.66■□□□□ 0.42
GTF2IRD2B-202ENST00000418185 NGEFQ8N5V2 710 aa17.66■□□□□ 0.42
GTF2IRD2B-202ENST00000418185 TBC1D9Q6ZT07 1266 aa17.65■□□□□ 0.42
GTF2IRD2B-202ENST00000418185 IL1RAPL2Q9NP60 686 aa17.65■□□□□ 0.42
GTF2IRD2B-202ENST00000418185 MBIPQ9NS73 344 aa17.65■□□□□ 0.42
GTF2IRD2B-202ENST00000418185 A0A0G2JS52 829 aa17.64■□□□□ 0.41
GTF2IRD2B-202ENST00000418185 OSCARQ8IYS5 282 aa17.64■□□□□ 0.41
GTF2IRD2B-202ENST00000418185 UPF3BQ9BZI7 483 aaKnown RBP17.64■□□□□ 0.41
GTF2IRD2B-202ENST00000418185 ARHGEF5Q12774 1597 aa17.63■□□□□ 0.41
GTF2IRD2B-202ENST00000418185 TRMT2AQ8IZ69 625 aaKnown RBP17.63■□□□□ 0.41
GTF2IRD2B-202ENST00000418185 TSPYL4Q9UJ04 414 aa17.63■□□□□ 0.41
GTF2IRD2B-202ENST00000418185 FOXO3O43524 673 aa17.63■□□□□ 0.41
GTF2IRD2B-202ENST00000418185 CD2BP2O95400 341 aaKnown RBP17.63■□□□□ 0.41
GTF2IRD2B-202ENST00000418185 MSNP26038 577 aaKnown RBP17.63■□□□□ 0.41
GTF2IRD2B-202ENST00000418185 KCNJ4P48050 445 aa17.63■□□□□ 0.41
GTF2IRD2B-202ENST00000418185 GDPD2Q9HCC8 539 aa17.63■□□□□ 0.41
GTF2IRD2B-202ENST00000418185 NAP1L2Q9ULW6 460 aaPredicted RBP17.63■□□□□ 0.41
GTF2IRD2B-202ENST00000418185 GRPEL1Q9HAV7 217 aa17.63■□□□□ 0.41
GTF2IRD2B-202ENST00000418185 DDX11L8A8MPP1 907 aa17.62■□□□□ 0.41
GTF2IRD2B-202ENST00000418185 NEK4P51957 841 aa17.62■□□□□ 0.41
GTF2IRD2B-202ENST00000418185 GNAI1P63096 354 aa17.62■□□□□ 0.41
GTF2IRD2B-202ENST00000418185 VSIG10Q8N0Z9 540 aa17.62■□□□□ 0.41
GTF2IRD2B-202ENST00000418185 RBM10P98175 930 aaKnown RBP17.62■□□□□ 0.41
GTF2IRD2B-202ENST00000418185 TTC37Q6PGP7 1564 aa17.62■□□□□ 0.41
GTF2IRD2B-202ENST00000418185 USHBP1Q8N6Y0 703 aa17.62■□□□□ 0.41
GTF2IRD2B-202ENST00000418185 STK31Q9BXU1 1019 aa17.61■□□□□ 0.41
GTF2IRD2B-202ENST00000418185 A0A1W2PP64 1363 aa17.61■□□□□ 0.41
GTF2IRD2B-202ENST00000418185 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.61■□□□□ 0.41
GTF2IRD2B-202ENST00000418185 RBM27Q9P2N5 1060 aaKnown RBP17.61■□□□□ 0.41
GTF2IRD2B-202ENST00000418185 POLKQ9UBT6 870 aa17.6■□□□□ 0.41
GTF2IRD2B-202ENST00000418185 GAS2L2Q8NHY3 880 aa17.6■□□□□ 0.41
GTF2IRD2B-202ENST00000418185 ANXA1P04083 346 aa17.59■□□□□ 0.41
GTF2IRD2B-202ENST00000418185 HSP90AB2PQ58FF8 381 aa17.59■□□□□ 0.41
GTF2IRD2B-202ENST00000418185 CCDC27Q2M243 656 aa17.59■□□□□ 0.41
GTF2IRD2B-202ENST00000418185 STAC3Q96MF2 364 aa17.59■□□□□ 0.41
GTF2IRD2B-202ENST00000418185 PIK3C2GO75747 1445 aa17.59■□□□□ 0.41
GTF2IRD2B-202ENST00000418185 CEBPAP49715 358 aaPredicted RBP17.59■□□□□ 0.41
GTF2IRD2B-202ENST00000418185 NFE2L2Q16236 605 aa17.59■□□□□ 0.41
GTF2IRD2B-202ENST00000418185 MEIS3Q99687 375 aa17.59■□□□□ 0.41
GTF2IRD2B-202ENST00000418185 CDC45O75419 566 aa17.58■□□□□ 0.41
GTF2IRD2B-202ENST00000418185 ZBTB40Q9NUA8 1239 aa17.58■□□□□ 0.41
GTF2IRD2B-202ENST00000418185 CDC42BPBQ9Y5S2 1711 aa17.58■□□□□ 0.41
GTF2IRD2B-202ENST00000418185 DUOX2Q9NRD8 1548 aa17.58■□□□□ 0.4
GTF2IRD2B-202ENST00000418185 XPCQ01831 940 aaPredicted RBP17.57■□□□□ 0.4
GTF2IRD2B-202ENST00000418185 ATP10AO60312 1499 aa17.57■□□□□ 0.4
GTF2IRD2B-202ENST00000418185 POLR3AO14802 1390 aaPredicted RBP17.57■□□□□ 0.4
GTF2IRD2B-202ENST00000418185 NASPP49321 788 aaPredicted RBP17.57■□□□□ 0.4
GTF2IRD2B-202ENST00000418185 K7ELQ4 463 aaPredicted RBP17.56■□□□□ 0.4
GTF2IRD2B-202ENST00000418185 NUDT16Q96DE0 195 aaKnown RBP17.56■□□□□ 0.4
GTF2IRD2B-202ENST00000418185 PKP1Q13835 747 aa17.56■□□□□ 0.4
GTF2IRD2B-202ENST00000418185 ZGPATQ8N5A5 531 aaKnown RBP17.56■□□□□ 0.4
GTF2IRD2B-202ENST00000418185 FAM13BQ9NYF5 915 aa17.56■□□□□ 0.4
GTF2IRD2B-202ENST00000418185 PTPRTO14522 1441 aa17.56■□□□□ 0.4
GTF2IRD2B-202ENST00000418185 FOSBP53539 338 aa17.56■□□□□ 0.4
GTF2IRD2B-202ENST00000418185 FAM43AQ8N2R8 423 aa17.56■□□□□ 0.4
GTF2IRD2B-202ENST00000418185 API5Q9BZZ5 524 aaKnown RBP17.56■□□□□ 0.4
GTF2IRD2B-202ENST00000418185 ZNF330Q9Y3S2 320 aaPredicted RBP17.56■□□□□ 0.4
GTF2IRD2B-202ENST00000418185 FCHSD2O94868 740 aa17.55■□□□□ 0.4
GTF2IRD2B-202ENST00000418185 PREX2Q70Z35 1606 aa17.55■□□□□ 0.4
GTF2IRD2B-202ENST00000418185 ERVK-7P63135 1459 aa17.55■□□□□ 0.4
GTF2IRD2B-202ENST00000418185 ST18O60284 1047 aa17.55■□□□□ 0.4
GTF2IRD2B-202ENST00000418185 INSRP06213 1382 aa17.55■□□□□ 0.4
GTF2IRD2B-202ENST00000418185 HSP90AA2PQ14568 343 aaPredicted RBP17.55■□□□□ 0.4
GTF2IRD2B-202ENST00000418185 RSPH6AQ9H0K4 717 aa17.55■□□□□ 0.4
GTF2IRD2B-202ENST00000418185 VAMP4O75379 141 aa17.54■□□□□ 0.4
GTF2IRD2B-202ENST00000418185 MRE11P49959 708 aa17.54■□□□□ 0.4
GTF2IRD2B-202ENST00000418185 NUTM1Q86Y26 1132 aa17.54■□□□□ 0.4
GTF2IRD2B-202ENST00000418185 CD109Q6YHK3 1445 aa17.54■□□□□ 0.4
GTF2IRD2B-202ENST00000418185 NLRP6P59044 892 aa17.54■□□□□ 0.4
GTF2IRD2B-202ENST00000418185 NUCB1Q02818 461 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms