RNA–Protein interactions for RNA: ENST00000417440.2

CASP4-202, Transcript of caspase 4, humanhuman

TSL 3

Gene CASP4, Length 763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-202ENST00000417440 COL22A1Q8NFW1 1626 aaPredicted RBP10.71□□□□□ -0.69
CASP4-202ENST00000417440 PMFBP1Q8TBY8 1022 aa10.71□□□□□ -0.69
CASP4-202ENST00000417440 PRAM1Q96QH2 718 aa10.71□□□□□ -0.69
CASP4-202ENST00000417440 YTHDC2Q9H6S0 1430 aaKnown RBP10.71□□□□□ -0.69
CASP4-202ENST00000417440 POGKQ9P215 609 aa10.71□□□□□ -0.69
CASP4-202ENST00000417440 SRCAPQ6ZRS2 3230 aa10.71□□□□□ -0.7
CASP4-202ENST00000417440 TECPR2O15040 1411 aa10.7□□□□□ -0.7
CASP4-202ENST00000417440 DHX57Q6P158 1386 aaKnown RBP10.7□□□□□ -0.7
CASP4-202ENST00000417440 NUBP1P53384 320 aa10.7□□□□□ -0.7
CASP4-202ENST00000417440 SF3B2Q13435 895 aaKnown RBP10.7□□□□□ -0.7
CASP4-202ENST00000417440 DEFB132Q7Z7B7 95 aa10.7□□□□□ -0.7
CASP4-202ENST00000417440 SEPT12Q8IYM1 358 aa10.7□□□□□ -0.7
CASP4-202ENST00000417440 C14orf93Q9H972 538 aaKnown RBP10.7□□□□□ -0.7
CASP4-202ENST00000417440 RALGAPBQ86X10 1494 aa10.69□□□□□ -0.7
CASP4-202ENST00000417440 PIK3C2GO75747 1445 aa10.69□□□□□ -0.7
CASP4-202ENST00000417440 HIRIP3Q9BW71 556 aaPredicted RBP10.69□□□□□ -0.7
CASP4-202ENST00000417440 SIRT1Q96EB6 747 aa10.68□□□□□ -0.7
CASP4-202ENST00000417440 TRAK1Q9UPV9 953 aa10.68□□□□□ -0.7
CASP4-202ENST00000417440 KDM2AQ9Y2K7 1162 aa10.68□□□□□ -0.7
CASP4-202ENST00000417440 FAM83GA6ND36 823 aa10.67□□□□□ -0.7
CASP4-202ENST00000417440 VPS72Q15906 364 aa10.67□□□□□ -0.7
CASP4-202ENST00000417440 SLIT2O94813 1529 aa10.67□□□□□ -0.7
CASP4-202ENST00000417440 TNS3Q68CZ2 1445 aa10.67□□□□□ -0.7
CASP4-202ENST00000417440 MINK1Q8N4C8 1332 aaPredicted RBP10.66□□□□□ -0.7
CASP4-202ENST00000417440 EP400Q96L91 3159 aa10.66□□□□□ -0.7
CASP4-202ENST00000417440 FXR2P51116 673 aaKnown RBP eCLIP10.66□□□□□ -0.7
CASP4-202ENST00000417440 KRT27Q7Z3Y8 459 aa10.66□□□□□ -0.7
CASP4-202ENST00000417440 BLMP54132 1417 aaPredicted RBP10.66□□□□□ -0.7
CASP4-202ENST00000417440 GLI3P10071 1580 aa10.65□□□□□ -0.7
CASP4-202ENST00000417440 PAK3O75914 559 aaPredicted RBP10.65□□□□□ -0.7
CASP4-202ENST00000417440 FAM98CQ17RN3 349 aaKnown RBP10.65□□□□□ -0.7
CASP4-202ENST00000417440 CHRDL2Q6WN34 429 aa10.65□□□□□ -0.7
CASP4-202ENST00000417440 SBNO1A3KN83 1393 aa10.65□□□□□ -0.71
CASP4-202ENST00000417440 FMN2Q9NZ56 1722 aa10.64□□□□□ -0.71
CASP4-202ENST00000417440 GSE1Q14687 1217 aa10.64□□□□□ -0.71
CASP4-202ENST00000417440 BTG4Q9NY30 223 aa10.64□□□□□ -0.71
CASP4-202ENST00000417440 CIZ1Q9ULV3 898 aaPredicted RBP10.64□□□□□ -0.71
CASP4-202ENST00000417440 ARHGEF10O15013 1369 aa10.64□□□□□ -0.71
CASP4-202ENST00000417440 USP32Q8NFA0 1604 aa10.63□□□□□ -0.71
CASP4-202ENST00000417440 PSDA5PKW4 1024 aaPredicted RBP10.63□□□□□ -0.71
CASP4-202ENST00000417440 ECM2O94769 699 aaPredicted RBP10.63□□□□□ -0.71
CASP4-202ENST00000417440 FAM182BQ5T319 152 aa10.63□□□□□ -0.71
CASP4-202ENST00000417440 DCAF11Q8TEB1 546 aa10.63□□□□□ -0.71
CASP4-202ENST00000417440 GPRASP1Q5JY77 1395 aa10.63□□□□□ -0.71
CASP4-202ENST00000417440 KIF1AQ12756 1690 aa10.63□□□□□ -0.71
CASP4-202ENST00000417440 NRXN1Q9ULB1 1477 aa10.62□□□□□ -0.71
CASP4-202ENST00000417440 KNDC1Q76NI1 1749 aa10.62□□□□□ -0.71
CASP4-202ENST00000417440 IFT172Q9UG01 1749 aa10.62□□□□□ -0.71
CASP4-202ENST00000417440 MARF1Q9Y4F3 1742 aaKnown RBP10.62□□□□□ -0.71
CASP4-202ENST00000417440 ONECUT3O60422 494 aaPredicted RBP10.62□□□□□ -0.71
CASP4-202ENST00000417440 NGDNQ8NEJ9 315 aaKnown RBP10.62□□□□□ -0.71
CASP4-202ENST00000417440 CHADLQ6NUI6 762 aa10.61□□□□□ -0.71
CASP4-202ENST00000417440 RAB3GAP2Q9H2M9 1393 aa10.61□□□□□ -0.71
CASP4-202ENST00000417440 PRR36Q9H6K5 1346 aa10.6□□□□□ -0.71
CASP4-202ENST00000417440 ACIN1Q9UKV3 1341 aaKnown RBP10.6□□□□□ -0.71
CASP4-202ENST00000417440 WASLO00401 505 aaPredicted RBP10.6□□□□□ -0.71
CASP4-202ENST00000417440 PRKAR2AP13861 404 aaKnown RBP10.6□□□□□ -0.71
CASP4-202ENST00000417440 BAG6P46379 1132 aa10.6□□□□□ -0.71
CASP4-202ENST00000417440 RGPD8O14715 1765 aaPredicted RBP10.6□□□□□ -0.71
CASP4-202ENST00000417440 ANKARQ7Z5J8 1434 aa10.59□□□□□ -0.71
CASP4-202ENST00000417440 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.59□□□□□ -0.71
CASP4-202ENST00000417440 EN1Q05925 392 aaPredicted RBP10.59□□□□□ -0.71
CASP4-202ENST00000417440 NUTM2GQ5VZR2 741 aa10.59□□□□□ -0.71
CASP4-202ENST00000417440 PRDM11Q9NQV5 511 aa10.59□□□□□ -0.71
CASP4-202ENST00000417440 STRN4Q9NRL3 753 aa10.59□□□□□ -0.71
CASP4-202ENST00000417440 FARP1Q9Y4F1 1045 aaPredicted RBP10.59□□□□□ -0.71
CASP4-202ENST00000417440 CHRNA2Q15822 529 aa10.58□□□□□ -0.72
CASP4-202ENST00000417440 FAM212AQ96EL1 285 aa10.58□□□□□ -0.72
CASP4-202ENST00000417440 ZC3H6P61129 1189 aaKnown RBP10.57□□□□□ -0.72
CASP4-202ENST00000417440 DCAF8Q5TAQ9 597 aa10.57□□□□□ -0.72
CASP4-202ENST00000417440 RASEFQ8IZ41 740 aa10.57□□□□□ -0.72
CASP4-202ENST00000417440 USP35Q9P2H5 1018 aa10.57□□□□□ -0.72
CASP4-202ENST00000417440 DLC1Q96QB1 1528 aa10.57□□□□□ -0.72
CASP4-202ENST00000417440 SPATA31A5Q5VU36 1347 aa10.57□□□□□ -0.72
CASP4-202ENST00000417440 SPATA31A7Q8IWB4 1347 aa10.57□□□□□ -0.72
CASP4-202ENST00000417440 PLCH1Q4KWH8 1693 aa10.57□□□□□ -0.72
CASP4-202ENST00000417440 BRWD3Q6RI45 1802 aa10.56□□□□□ -0.72
CASP4-202ENST00000417440 EIF3AQ14152 1382 aaKnown RBP10.56□□□□□ -0.72
CASP4-202ENST00000417440 POTEHQ6S545 545 aa10.56□□□□□ -0.72
CASP4-202ENST00000417440 PIP4P2Q8N4L2 257 aa10.56□□□□□ -0.72
CASP4-202ENST00000417440 NUDT16Q96DE0 195 aaKnown RBP10.56□□□□□ -0.72
CASP4-202ENST00000417440 HRCP23327 699 aa10.55□□□□□ -0.72
CASP4-202ENST00000417440 EVA1CP58658 441 aa10.55□□□□□ -0.72
CASP4-202ENST00000417440 R3HDM1Q15032 1099 aaKnown RBP10.55□□□□□ -0.72
CASP4-202ENST00000417440 CDK19Q9BWU1 502 aa10.55□□□□□ -0.72
CASP4-202ENST00000417440 ADGRB1O14514 1584 aa10.55□□□□□ -0.72
CASP4-202ENST00000417440 KIAA0232Q92628 1395 aa10.54□□□□□ -0.72
CASP4-202ENST00000417440 TULP4Q9NRJ4 1543 aa10.54□□□□□ -0.72
CASP4-202ENST00000417440 TRIM37O94972 964 aa10.54□□□□□ -0.72
CASP4-202ENST00000417440 EZH2Q15910 746 aaKnown RBP10.54□□□□□ -0.72
CASP4-202ENST00000417440 NWD2Q9ULI1 1742 aa10.53□□□□□ -0.72
CASP4-202ENST00000417440 ZBTB7CA1YPR0 619 aa10.53□□□□□ -0.72
CASP4-202ENST00000417440 RGL2O15211 777 aa10.53□□□□□ -0.72
CASP4-202ENST00000417440 SPATA31A1Q5TZJ5 1347 aa10.53□□□□□ -0.72
CASP4-202ENST00000417440 ABCA3Q99758 1704 aa10.53□□□□□ -0.72
CASP4-202ENST00000417440 ADGRB2O60241 1585 aa10.52□□□□□ -0.72
CASP4-202ENST00000417440 APBA3O96018 575 aa10.52□□□□□ -0.73
CASP4-202ENST00000417440 ABTB2Q8N961 1025 aa10.52□□□□□ -0.73
CASP4-202ENST00000417440 ACEP12821 1306 aa10.52□□□□□ -0.73
CASP4-202ENST00000417440 TRPM3Q9HCF6 1732 aaPredicted RBP10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms