RNA–Protein interactions for RNA: ENST00000417413.7

RAB3IP-205, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best)

Gene RAB3IP, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-205ENST00000417413 KCNA6P17658 529 aa25.46■■□□□ 1.67
RAB3IP-205ENST00000417413 RGPD8O14715 1765 aaPredicted RBP25.46■■□□□ 1.67
RAB3IP-205ENST00000417413 NKTRP30414 1462 aaKnown RBP25.45■■□□□ 1.67
RAB3IP-205ENST00000417413 APAF1O14727 1248 aa25.45■■□□□ 1.67
RAB3IP-205ENST00000417413 MAP2P11137 1827 aaKnown RBP25.45■■□□□ 1.66
RAB3IP-205ENST00000417413 NGEFQ8N5V2 710 aa25.43■■□□□ 1.66
RAB3IP-205ENST00000417413 NME9Q86XW9 330 aa25.42■■□□□ 1.66
RAB3IP-205ENST00000417413 PNPLA6Q8IY17 1366 aa25.42■■□□□ 1.66
RAB3IP-205ENST00000417413 FMN2Q9NZ56 1722 aa25.42■■□□□ 1.66
RAB3IP-205ENST00000417413 IQSEC2Q5JU85 1478 aa25.41■■□□□ 1.66
RAB3IP-205ENST00000417413 ACEP12821 1306 aa25.41■■□□□ 1.66
RAB3IP-205ENST00000417413 RUNDC1Q96C34 613 aa25.41■■□□□ 1.66
RAB3IP-205ENST00000417413 NUTM2FA1L443 756 aa25.39■■□□□ 1.66
RAB3IP-205ENST00000417413 NALCNQ8IZF0 1738 aa25.39■■□□□ 1.65
RAB3IP-205ENST00000417413 ZRANB1Q9UGI0 708 aa25.38■■□□□ 1.65
RAB3IP-205ENST00000417413 DMRT2Q9Y5R5 561 aa25.38■■□□□ 1.65
RAB3IP-205ENST00000417413 GOLGA2Q08379 1002 aa25.37■■□□□ 1.65
RAB3IP-205ENST00000417413 POLKQ9UBT6 870 aa25.37■■□□□ 1.65
RAB3IP-205ENST00000417413 RCAN3Q9UKA8 241 aa25.37■■□□□ 1.65
RAB3IP-205ENST00000417413 USP6P35125 1406 aa25.37■■□□□ 1.65
RAB3IP-205ENST00000417413 ANKARQ7Z5J8 1434 aa25.36■■□□□ 1.65
RAB3IP-205ENST00000417413 SSH2Q76I76 1423 aa25.36■■□□□ 1.65
RAB3IP-205ENST00000417413 AATKQ6ZMQ8 1374 aa25.36■■□□□ 1.65
RAB3IP-205ENST00000417413 TTC21BQ7Z4L5 1316 aa25.35■■□□□ 1.65
RAB3IP-205ENST00000417413 DUSP27Q5VZP5 1158 aa25.35■■□□□ 1.65
RAB3IP-205ENST00000417413 TRMT2AQ8IZ69 625 aaKnown RBP25.35■■□□□ 1.65
RAB3IP-205ENST00000417413 U2AF1L5P0DN76 240 aaPredicted RBP25.34■■□□□ 1.65
RAB3IP-205ENST00000417413 U2AF1Q01081 240 aaKnown RBP eCLIP25.34■■□□□ 1.65
RAB3IP-205ENST00000417413 SLFN5Q08AF3 891 aa25.34■■□□□ 1.65
RAB3IP-205ENST00000417413 FBLN1P23142 703 aa25.34■■□□□ 1.65
RAB3IP-205ENST00000417413 COG3Q96JB2 828 aa25.34■■□□□ 1.65
RAB3IP-205ENST00000417413 TCP11L2Q8N4U5 519 aa25.32■■□□□ 1.64
RAB3IP-205ENST00000417413 DIAPH1O60610 1272 aaKnown RBP25.31■■□□□ 1.64
RAB3IP-205ENST00000417413 PPP4R2Q9NY27 417 aa25.31■■□□□ 1.64
RAB3IP-205ENST00000417413 NWD1Q149M9 1564 aa25.31■■□□□ 1.64
RAB3IP-205ENST00000417413 NCBP3Q53F19 620 aaKnown RBP25.3■■□□□ 1.64
RAB3IP-205ENST00000417413 PHF23Q9BUL5 403 aaPredicted RBP25.3■■□□□ 1.64
RAB3IP-205ENST00000417413 OVOS2A0A0J9YW53 1432 aa25.3■■□□□ 1.64
RAB3IP-205ENST00000417413 OVOS2Q6IE36 1432 aa25.3■■□□□ 1.64
RAB3IP-205ENST00000417413 CDK12Q9NYV4 1490 aaPredicted RBP25.3■■□□□ 1.64
RAB3IP-205ENST00000417413 RRP1P56182 461 aaKnown RBP25.3■■□□□ 1.64
RAB3IP-205ENST00000417413 C14orf37Q86TY3 774 aa25.3■■□□□ 1.64
RAB3IP-205ENST00000417413 PROSER2Q86WR7 435 aaPredicted RBP25.3■■□□□ 1.64
RAB3IP-205ENST00000417413 WWC1Q8IX03 1113 aa25.3■■□□□ 1.64
RAB3IP-205ENST00000417413 PLEKHF1Q96S99 279 aa25.29■■□□□ 1.64
RAB3IP-205ENST00000417413 SPINK5Q9NQ38 1064 aaPredicted RBP25.29■■□□□ 1.64
RAB3IP-205ENST00000417413 U2SURPO15042 1029 aaKnown RBP25.28■■□□□ 1.64
RAB3IP-205ENST00000417413 PMFBP1Q8TBY8 1022 aa25.28■■□□□ 1.64
RAB3IP-205ENST00000417413 EMILIN1Q9Y6C2 1016 aa25.27■■□□□ 1.64
RAB3IP-205ENST00000417413 CCDC27Q2M243 656 aa25.26■■□□□ 1.63
RAB3IP-205ENST00000417413 NCOA3Q9Y6Q9 1424 aa25.26■■□□□ 1.63
RAB3IP-205ENST00000417413 E9PSI1 815 aa25.26■■□□□ 1.63
RAB3IP-205ENST00000417413 TTC21AQ8NDW8 1320 aa25.26■■□□□ 1.63
RAB3IP-205ENST00000417413 ADGRL3Q9HAR2 1447 aa25.25■■□□□ 1.63
RAB3IP-205ENST00000417413 RRP7AQ9Y3A4 280 aaKnown RBP25.25■■□□□ 1.63
RAB3IP-205ENST00000417413 PPM1GO15355 546 aaPredicted RBP25.23■■□□□ 1.63
RAB3IP-205ENST00000417413 PELP1Q8IZL8 1130 aaKnown RBP25.23■■□□□ 1.63
RAB3IP-205ENST00000417413 NGDNQ8NEJ9 315 aaKnown RBP25.23■■□□□ 1.63
RAB3IP-205ENST00000417413 USP31Q70CQ4 1352 aa25.23■■□□□ 1.63
RAB3IP-205ENST00000417413 PIK3C2AO00443 1686 aa25.23■■□□□ 1.63
RAB3IP-205ENST00000417413 NEUROD2Q15784 382 aa25.22■■□□□ 1.63
RAB3IP-205ENST00000417413 LRRC7Q96NW7 1537 aa25.21■■□□□ 1.63
RAB3IP-205ENST00000417413 USP54Q70EL1 1684 aa25.2■■□□□ 1.63
RAB3IP-205ENST00000417413 IL13P35225 146 aa25.2■■□□□ 1.62
RAB3IP-205ENST00000417413 RRS1Q15050 365 aaKnown RBP25.2■■□□□ 1.62
RAB3IP-205ENST00000417413 WDR63Q8IWG1 891 aa25.2■■□□□ 1.62
RAB3IP-205ENST00000417413 RBM33Q96EV2 1170 aaKnown RBP25.2■■□□□ 1.62
RAB3IP-205ENST00000417413 C19orf44Q9H6X5 657 aa25.2■■□□□ 1.62
RAB3IP-205ENST00000417413 STRCQ7RTU9 1775 aa25.19■■□□□ 1.62
RAB3IP-205ENST00000417413 MARF1Q9Y4F3 1742 aaKnown RBP25.19■■□□□ 1.62
RAB3IP-205ENST00000417413 PEAK1Q9H792 1746 aa25.19■■□□□ 1.62
RAB3IP-205ENST00000417413 FCHSD2O94868 740 aa25.19■■□□□ 1.62
RAB3IP-205ENST00000417413 PNNQ9H307 717 aaKnown RBP25.19■■□□□ 1.62
RAB3IP-205ENST00000417413 RSPH6AQ9H0K4 717 aa25.17■■□□□ 1.62
RAB3IP-205ENST00000417413 TMEM94Q12767 1356 aa25.17■■□□□ 1.62
RAB3IP-205ENST00000417413 TMPOP42166 694 aaKnown RBP25.16■■□□□ 1.62
RAB3IP-205ENST00000417413 MAPK8IP3Q9UPT6 1336 aa25.15■■□□□ 1.62
RAB3IP-205ENST00000417413 PHF8Q9UPP1 1060 aa25.14■■□□□ 1.61
RAB3IP-205ENST00000417413 ATF3P18847 181 aa25.13■■□□□ 1.61
RAB3IP-205ENST00000417413 DCCP43146 1447 aa25.13■■□□□ 1.61
RAB3IP-205ENST00000417413 B4GALNT3Q6L9W6 998 aa25.12■■□□□ 1.61
RAB3IP-205ENST00000417413 TRIM35Q9UPQ4 493 aa25.12■■□□□ 1.61
RAB3IP-205ENST00000417413 STRCP1A6NGW2 1772 aa25.12■■□□□ 1.61
RAB3IP-205ENST00000417413 PLIN1O60240 522 aa25.11■■□□□ 1.61
RAB3IP-205ENST00000417413 PRKAR2BP31323 418 aa25.11■■□□□ 1.61
RAB3IP-205ENST00000417413 ZNF335Q9H4Z2 1342 aaPredicted RBP25.1■■□□□ 1.61
RAB3IP-205ENST00000417413 MSH6P52701 1360 aa25.1■■□□□ 1.61
RAB3IP-205ENST00000417413 CADPS2Q86UW7 1296 aa25.1■■□□□ 1.61
RAB3IP-205ENST00000417413 RGPD1P0DJD0 1748 aa25.09■■□□□ 1.61
RAB3IP-205ENST00000417413 EXOC6Q8TAG9 804 aa25.08■■□□□ 1.61
RAB3IP-205ENST00000417413 HMOX1P09601 288 aa25.08■■□□□ 1.6
RAB3IP-205ENST00000417413 AEBP2Q6ZN18 517 aaPredicted RBP25.08■■□□□ 1.6
RAB3IP-205ENST00000417413 RIPK4P57078 832 aa25.07■■□□□ 1.6
RAB3IP-205ENST00000417413 EIF4A2Q14240 407 aaKnown RBP25.07■■□□□ 1.6
RAB3IP-205ENST00000417413 MAP3K19Q56UN5 1328 aa25.06■■□□□ 1.6
RAB3IP-205ENST00000417413 PHACTR3Q96KR7 559 aa25.05■■□□□ 1.6
RAB3IP-205ENST00000417413 DLG5Q8TDM6 1919 aa25.05■■□□□ 1.6
RAB3IP-205ENST00000417413 NLRP6P59044 892 aa25.04■■□□□ 1.6
RAB3IP-205ENST00000417413 ESCO1Q5FWF5 840 aa25.04■■□□□ 1.6
RAB3IP-205ENST00000417413 MYH16Q9H6N6 1097 aa25.04■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms