RNA–Protein interactions for RNA: ENST00000417172.5

CALD1-204, Transcript of caldesmon 1, humanhuman

TSL 5 BASIC

Gene CALD1, Length 1,915 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-204ENST00000417172 MAP2P11137 1827 aaKnown RBP22.77■■□□□ 1.24
CALD1-204ENST00000417172 XIRP1Q702N8 1843 aaKnown RBP22.77■■□□□ 1.24
CALD1-204ENST00000417172 NGDNQ8NEJ9 315 aaKnown RBP22.76■■□□□ 1.23
CALD1-204ENST00000417172 TMEM94Q12767 1356 aa22.75■■□□□ 1.23
CALD1-204ENST00000417172 TTC21BQ7Z4L5 1316 aa22.75■■□□□ 1.23
CALD1-204ENST00000417172 BLMP54132 1417 aaPredicted RBP22.74■■□□□ 1.23
CALD1-204ENST00000417172 SSH2Q76I76 1423 aa22.74■■□□□ 1.23
CALD1-204ENST00000417172 ZBED9Q6R2W3 1325 aa22.74■■□□□ 1.23
CALD1-204ENST00000417172 WDR43Q15061 677 aaKnown RBP eCLIP22.74■■□□□ 1.23
CALD1-204ENST00000417172 ZNF335Q9H4Z2 1342 aaPredicted RBP22.71■■□□□ 1.23
CALD1-204ENST00000417172 PIK3C2AO00443 1686 aa22.71■■□□□ 1.23
CALD1-204ENST00000417172 ESCO1Q5FWF5 840 aa22.7■■□□□ 1.23
CALD1-204ENST00000417172 PHF8Q9UPP1 1060 aa22.7■■□□□ 1.23
CALD1-204ENST00000417172 SALL2Q9Y467 1007 aaPredicted RBP22.7■■□□□ 1.23
CALD1-204ENST00000417172 COG3Q96JB2 828 aa22.69■■□□□ 1.22
CALD1-204ENST00000417172 ORAI2Q96SN7 254 aa22.69■■□□□ 1.22
CALD1-204ENST00000417172 C19orf44Q9H6X5 657 aa22.69■■□□□ 1.22
CALD1-204ENST00000417172 COL3A1P02461 1466 aaPredicted RBP22.68■■□□□ 1.22
CALD1-204ENST00000417172 OVOS2A0A0J9YW53 1432 aa22.68■■□□□ 1.22
CALD1-204ENST00000417172 OVOS2Q6IE36 1432 aa22.68■■□□□ 1.22
CALD1-204ENST00000417172 CCDC146Q8IYE0 955 aa22.67■■□□□ 1.22
CALD1-204ENST00000417172 MARF1Q9Y4F3 1742 aaKnown RBP22.67■■□□□ 1.22
CALD1-204ENST00000417172 POLKQ9UBT6 870 aa22.66■■□□□ 1.22
CALD1-204ENST00000417172 PPM1GO15355 546 aaPredicted RBP22.65■■□□□ 1.22
CALD1-204ENST00000417172 CFAP53Q96M91 514 aa22.65■■□□□ 1.22
CALD1-204ENST00000417172 EMILIN1Q9Y6C2 1016 aa22.65■■□□□ 1.22
CALD1-204ENST00000417172 C1orf167Q5SNV9 1468 aa22.65■■□□□ 1.22
CALD1-204ENST00000417172 RRS1Q15050 365 aaKnown RBP22.65■■□□□ 1.22
CALD1-204ENST00000417172 INSRP06213 1382 aa22.64■■□□□ 1.22
CALD1-204ENST00000417172 LRRC7Q96NW7 1537 aa22.64■■□□□ 1.22
CALD1-204ENST00000417172 TTC21AQ8NDW8 1320 aa22.64■■□□□ 1.21
CALD1-204ENST00000417172 SCAF1Q9H7N4 1312 aaKnown RBP22.63■■□□□ 1.21
CALD1-204ENST00000417172 MST1RQ04912 1400 aa22.63■■□□□ 1.21
CALD1-204ENST00000417172 SOX12O15370 315 aa22.63■■□□□ 1.21
CALD1-204ENST00000417172 NUTM2GQ5VZR2 741 aa22.63■■□□□ 1.21
CALD1-204ENST00000417172 PAK3O75914 559 aaPredicted RBP22.62■■□□□ 1.21
CALD1-204ENST00000417172 XPCQ01831 940 aaPredicted RBP22.62■■□□□ 1.21
CALD1-204ENST00000417172 GTF3C3Q9Y5Q9 886 aa22.62■■□□□ 1.21
CALD1-204ENST00000417172 ATF3P18847 181 aa22.61■■□□□ 1.21
CALD1-204ENST00000417172 NCOA3Q9Y6Q9 1424 aa22.61■■□□□ 1.21
CALD1-204ENST00000417172 FOXO3O43524 673 aa22.61■■□□□ 1.21
CALD1-204ENST00000417172 DCCP43146 1447 aa22.6■■□□□ 1.21
CALD1-204ENST00000417172 AATKQ6ZMQ8 1374 aa22.6■■□□□ 1.21
CALD1-204ENST00000417172 PNPLA6Q8IY17 1366 aa22.6■■□□□ 1.21
CALD1-204ENST00000417172 SMG6Q86US8 1419 aaKnown RBP22.6■■□□□ 1.21
CALD1-204ENST00000417172 PEAK1Q9H792 1746 aa22.59■■□□□ 1.21
CALD1-204ENST00000417172 KIF1AQ12756 1690 aa22.59■■□□□ 1.21
CALD1-204ENST00000417172 PSME1Q06323 249 aa22.59■■□□□ 1.21
CALD1-204ENST00000417172 MSH6P52701 1360 aa22.58■■□□□ 1.21
CALD1-204ENST00000417172 USP54Q70EL1 1684 aa22.58■■□□□ 1.2
CALD1-204ENST00000417172 USP31Q70CQ4 1352 aa22.57■■□□□ 1.2
CALD1-204ENST00000417172 CDK12Q9NYV4 1490 aaPredicted RBP22.57■■□□□ 1.2
CALD1-204ENST00000417172 U2SURPO15042 1029 aaKnown RBP22.57■■□□□ 1.2
CALD1-204ENST00000417172 U2AF1L5P0DN76 240 aaPredicted RBP22.57■■□□□ 1.2
CALD1-204ENST00000417172 NLRP6P59044 892 aa22.57■■□□□ 1.2
CALD1-204ENST00000417172 U2AF1Q01081 240 aaKnown RBP eCLIP22.57■■□□□ 1.2
CALD1-204ENST00000417172 ABTB2Q8N961 1025 aa22.57■■□□□ 1.2
CALD1-204ENST00000417172 TRPM3Q9HCF6 1732 aaPredicted RBP22.56■■□□□ 1.2
CALD1-204ENST00000417172 DDX17Q92841 729 aaKnown RBP22.56■■□□□ 1.2
CALD1-204ENST00000417172 APAF1O14727 1248 aa22.55■■□□□ 1.2
CALD1-204ENST00000417172 DIAPH1O60610 1272 aaKnown RBP22.55■■□□□ 1.2
CALD1-204ENST00000417172 CADPS2Q86UW7 1296 aa22.54■■□□□ 1.2
CALD1-204ENST00000417172 DMRT2Q9Y5R5 561 aa22.51■■□□□ 1.19
CALD1-204ENST00000417172 CDCA7LQ96GN5 454 aa22.51■■□□□ 1.19
CALD1-204ENST00000417172 NUDCQ9Y266 331 aa22.51■■□□□ 1.19
CALD1-204ENST00000417172 IQSEC2Q5JU85 1478 aa22.51■■□□□ 1.19
CALD1-204ENST00000417172 PLEKHG5O94827 1062 aa22.5■■□□□ 1.19
CALD1-204ENST00000417172 MAP3K19Q56UN5 1328 aa22.5■■□□□ 1.19
CALD1-204ENST00000417172 KRT28Q7Z3Y7 464 aa22.49■■□□□ 1.19
CALD1-204ENST00000417172 LTN1O94822 1766 aa22.49■■□□□ 1.19
CALD1-204ENST00000417172 RUNDC1Q96C34 613 aa22.49■■□□□ 1.19
CALD1-204ENST00000417172 RRP7AQ9Y3A4 280 aaKnown RBP22.49■■□□□ 1.19
CALD1-204ENST00000417172 IL13P35225 146 aa22.48■■□□□ 1.19
CALD1-204ENST00000417172 ALS2Q96Q42 1657 aa22.47■■□□□ 1.19
CALD1-204ENST00000417172 HSP90AB2PQ58FF8 381 aa22.47■■□□□ 1.19
CALD1-204ENST00000417172 LMOD2Q6P5Q4 547 aa22.47■■□□□ 1.19
CALD1-204ENST00000417172 NEUROD2Q15784 382 aa22.46■■□□□ 1.19
CALD1-204ENST00000417172 ZNF521Q96K83 1311 aa22.45■■□□□ 1.19
CALD1-204ENST00000417172 MYT1Q01538 1121 aa22.45■■□□□ 1.18
CALD1-204ENST00000417172 TCP11L2Q8N4U5 519 aa22.45■■□□□ 1.18
CALD1-204ENST00000417172 HMOX1P09601 288 aa22.45■■□□□ 1.18
CALD1-204ENST00000417172 PLEKHF1Q96S99 279 aa22.45■■□□□ 1.18
CALD1-204ENST00000417172 NFAT5O94916 1531 aa22.44■■□□□ 1.18
CALD1-204ENST00000417172 SUPT16HQ9Y5B9 1047 aaKnown RBP22.44■■□□□ 1.18
CALD1-204ENST00000417172 EIF4A2Q14240 407 aaKnown RBP22.43■■□□□ 1.18
CALD1-204ENST00000417172 BRINP3Q76B58 766 aa22.43■■□□□ 1.18
CALD1-204ENST00000417172 SBNO1A3KN83 1393 aa22.42■■□□□ 1.18
CALD1-204ENST00000417172 RGPD1P0DJD0 1748 aa22.42■■□□□ 1.18
CALD1-204ENST00000417172 PXDNQ92626 1479 aa22.41■■□□□ 1.18
CALD1-204ENST00000417172 RSPH6AQ9H0K4 717 aa22.41■■□□□ 1.18
CALD1-204ENST00000417172 SLAIN2Q9P270 581 aa22.41■■□□□ 1.18
CALD1-204ENST00000417172 FLT4P35916 1363 aa22.41■■□□□ 1.18
CALD1-204ENST00000417172 AMPHP49418 695 aa22.4■■□□□ 1.18
CALD1-204ENST00000417172 LTBP4Q8N2S1 1624 aa22.4■■□□□ 1.18
CALD1-204ENST00000417172 SLIT3O75094 1523 aa22.39■■□□□ 1.18
CALD1-204ENST00000417172 PRKAR2BP31323 418 aa22.39■■□□□ 1.18
CALD1-204ENST00000417172 PDE3BQ13370 1112 aa22.39■■□□□ 1.18
CALD1-204ENST00000417172 NPHP3Q7Z494 1330 aa22.39■■□□□ 1.17
CALD1-204ENST00000417172 SPINK5Q9NQ38 1064 aaPredicted RBP22.39■■□□□ 1.17
CALD1-204ENST00000417172 MED1Q15648 1581 aaPredicted RBP22.39■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms