RNA–Protein interactions for RNA: ENST00000417030.2

CKLF-205, Transcript of chemokine like factor, humanhuman

APPRIS ALT2 TSL 4 BASIC

Gene CKLF, Length 628 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKLF-205ENST00000417030 TRPM3Q9HCF6 1732 aaPredicted RBP30.78■■■□□ 2.52
CKLF-205ENST00000417030 RBM6P78332 1123 aaKnown RBP30.78■■■□□ 2.52
CKLF-205ENST00000417030 PLEKHG5O94827 1062 aa30.77■■■□□ 2.52
CKLF-205ENST00000417030 PPIP5K1Q6PFW1 1433 aa30.77■■■□□ 2.52
CKLF-205ENST00000417030 TRPC5Q9UL62 973 aaPredicted RBP30.77■■■□□ 2.52
CKLF-205ENST00000417030 MARF1Q9Y4F3 1742 aaKnown RBP30.76■■■□□ 2.51
CKLF-205ENST00000417030 SLC24A1O60721 1099 aa30.75■■■□□ 2.51
CKLF-205ENST00000417030 CABP1Q9NZU7 370 aa30.74■■■□□ 2.51
CKLF-205ENST00000417030 ALS2Q96Q42 1657 aa30.73■■■□□ 2.51
CKLF-205ENST00000417030 CDK12Q9NYV4 1490 aaPredicted RBP30.71■■■□□ 2.51
CKLF-205ENST00000417030 ATAD2Q6PL18 1390 aa30.71■■■□□ 2.51
CKLF-205ENST00000417030 BCL9LQ86UU0 1499 aa30.7■■■□□ 2.51
CKLF-205ENST00000417030 EIF4G2P78344 907 aaKnown RBP eCLIP30.68■■■□□ 2.5
CKLF-205ENST00000417030 UNC5CLQ8IV45 518 aa30.68■■■□□ 2.5
CKLF-205ENST00000417030 PUS7Q96PZ0 661 aaKnown RBP30.68■■■□□ 2.5
CKLF-205ENST00000417030 BRD4O60885 1362 aaPredicted RBP30.67■■■□□ 2.5
CKLF-205ENST00000417030 ATRNO75882 1429 aa30.66■■■□□ 2.5
CKLF-205ENST00000417030 ABTB2Q8N961 1025 aa30.66■■■□□ 2.5
CKLF-205ENST00000417030 SLIT2O94813 1529 aa30.66■■■□□ 2.5
CKLF-205ENST00000417030 FAM83GA6ND36 823 aa30.65■■■□□ 2.5
CKLF-205ENST00000417030 ZNF692Q9BU19 519 aaPredicted RBP30.65■■■□□ 2.5
CKLF-205ENST00000417030 TMF1P82094 1093 aa30.64■■■□□ 2.5
CKLF-205ENST00000417030 ABCA3Q99758 1704 aa30.63■■■□□ 2.49
CKLF-205ENST00000417030 HSPA5P11021 654 aaKnown RBP30.62■■■□□ 2.49
CKLF-205ENST00000417030 GJD4Q96KN9 370 aaPredicted RBP30.62■■■□□ 2.49
CKLF-205ENST00000417030 NUTM2GQ5VZR2 741 aa30.61■■■□□ 2.49
CKLF-205ENST00000417030 NLRP13Q86W25 1043 aa30.6■■■□□ 2.49
CKLF-205ENST00000417030 AKAP12Q02952 1782 aa30.59■■■□□ 2.49
CKLF-205ENST00000417030 USP6P35125 1406 aa30.59■■■□□ 2.49
CKLF-205ENST00000417030 TNKS1BP1Q9C0C2 1729 aaKnown RBP30.58■■■□□ 2.49
CKLF-205ENST00000417030 RGS12O14924 1447 aa30.56■■■□□ 2.48
CKLF-205ENST00000417030 VPS72Q15906 364 aa30.56■■■□□ 2.48
CKLF-205ENST00000417030 CDCA8Q53HL2 280 aa30.56■■■□□ 2.48
CKLF-205ENST00000417030 PRDM11Q9NQV5 511 aa30.55■■■□□ 2.48
CKLF-205ENST00000417030 BTG4Q9NY30 223 aa30.55■■■□□ 2.48
CKLF-205ENST00000417030 CPSF1Q10570 1443 aaKnown RBP30.55■■■□□ 2.48
CKLF-205ENST00000417030 NWD2Q9ULI1 1742 aa30.54■■■□□ 2.48
CKLF-205ENST00000417030 NINLQ9Y2I6 1382 aa30.54■■■□□ 2.48
CKLF-205ENST00000417030 CRYBG1Q9Y4K1 1723 aa30.53■■■□□ 2.48
CKLF-205ENST00000417030 TMC1Q8TDI8 760 aa30.52■■■□□ 2.48
CKLF-205ENST00000417030 SSH2Q76I76 1423 aa30.52■■■□□ 2.48
CKLF-205ENST00000417030 COL14A1Q05707 1796 aaKnown RBP30.51■■■□□ 2.48
CKLF-205ENST00000417030 CD163L1Q9NR16 1453 aa30.51■■■□□ 2.48
CKLF-205ENST00000417030 USP19O94966 1318 aa30.51■■■□□ 2.48
CKLF-205ENST00000417030 MON2Q7Z3U7 1717 aa30.51■■■□□ 2.47
CKLF-205ENST00000417030 NLRP6P59044 892 aa30.51■■■□□ 2.47
CKLF-205ENST00000417030 ZC3H6P61129 1189 aaKnown RBP30.51■■■□□ 2.47
CKLF-205ENST00000417030 SLC12A5Q9H2X9 1139 aa30.51■■■□□ 2.47
CKLF-205ENST00000417030 CCDC9Q9Y3X0 531 aaKnown RBP30.51■■■□□ 2.47
CKLF-205ENST00000417030 PLCH1Q4KWH8 1693 aa30.51■■■□□ 2.47
CKLF-205ENST00000417030 KIAA0232Q92628 1395 aa30.51■■■□□ 2.47
CKLF-205ENST00000417030 TTC21BQ7Z4L5 1316 aa30.49■■■□□ 2.47
CKLF-205ENST00000417030 GCP02774 474 aa30.49■■■□□ 2.47
CKLF-205ENST00000417030 KTN1Q86UP2 1357 aaKnown RBP30.49■■■□□ 2.47
CKLF-205ENST00000417030 NRKQ7Z2Y5 1582 aa30.48■■■□□ 2.47
CKLF-205ENST00000417030 TTC21AQ8NDW8 1320 aa30.47■■■□□ 2.47
CKLF-205ENST00000417030 PHRF1Q9P1Y6 1649 aaKnown RBP30.47■■■□□ 2.47
CKLF-205ENST00000417030 HDGFL2Q7Z4V5 671 aaPredicted RBP30.46■■■□□ 2.47
CKLF-205ENST00000417030 UPF1Q92900 1129 aaKnown RBP eCLIP30.46■■■□□ 2.47
CKLF-205ENST00000417030 CHRNA2Q15822 529 aa30.45■■■□□ 2.47
CKLF-205ENST00000417030 TERF2IPQ9NYB0 399 aa30.45■■■□□ 2.47
CKLF-205ENST00000417030 MYOM1P52179 1685 aa30.45■■■□□ 2.46
CKLF-205ENST00000417030 CPDO75976 1380 aa30.44■■■□□ 2.46
CKLF-205ENST00000417030 A0A1W2PP64 1363 aa30.43■■■□□ 2.46
CKLF-205ENST00000417030 ONECUT3O60422 494 aaPredicted RBP30.43■■■□□ 2.46
CKLF-205ENST00000417030 GLI3P10071 1580 aa30.43■■■□□ 2.46
CKLF-205ENST00000417030 PIK3C2AO00443 1686 aa30.4■■■□□ 2.46
CKLF-205ENST00000417030 ANKRD36BQ8N2N9 1353 aa30.4■■■□□ 2.46
CKLF-205ENST00000417030 NRAPQ86VF7 1730 aa30.39■■■□□ 2.46
CKLF-205ENST00000417030 EVA1CP58658 441 aa30.39■■■□□ 2.46
CKLF-205ENST00000417030 EDC4Q6P2E9 1401 aaKnown RBP30.39■■■□□ 2.45
CKLF-205ENST00000417030 SEPT12Q8IYM1 358 aa30.38■■■□□ 2.45
CKLF-205ENST00000417030 KCNH5Q8NCM2 988 aa30.38■■■□□ 2.45
CKLF-205ENST00000417030 SUGP2Q8IX01 1082 aaKnown RBP eCLIP30.37■■■□□ 2.45
CKLF-205ENST00000417030 SPATA31A5Q5VU36 1347 aa30.37■■■□□ 2.45
CKLF-205ENST00000417030 SPATA31A7Q8IWB4 1347 aa30.37■■■□□ 2.45
CKLF-205ENST00000417030 STRN4Q9NRL3 753 aa30.36■■■□□ 2.45
CKLF-205ENST00000417030 C11orf95C9JLR9 678 aaPredicted RBP30.35■■■□□ 2.45
CKLF-205ENST00000417030 SLIT3O75094 1523 aa30.35■■■□□ 2.45
CKLF-205ENST00000417030 ZEB1P37275 1124 aaPredicted RBP30.33■■■□□ 2.45
CKLF-205ENST00000417030 FAM98CQ17RN3 349 aaKnown RBP30.33■■■□□ 2.45
CKLF-205ENST00000417030 POLR3GLQ9BT43 218 aa30.33■■■□□ 2.45
CKLF-205ENST00000417030 ZBTB7CA1YPR0 619 aa30.31■■■□□ 2.44
CKLF-205ENST00000417030 AATKQ6ZMQ8 1374 aa30.3■■■□□ 2.44
CKLF-205ENST00000417030 USP31Q70CQ4 1352 aa30.3■■■□□ 2.44
CKLF-205ENST00000417030 USP54Q70EL1 1684 aa30.3■■■□□ 2.44
CKLF-205ENST00000417030 SPATA31A1Q5TZJ5 1347 aa30.3■■■□□ 2.44
CKLF-205ENST00000417030 A0A0G2JS52 829 aa30.3■■■□□ 2.44
CKLF-205ENST00000417030 MYT1Q01538 1121 aa30.3■■■□□ 2.44
CKLF-205ENST00000417030 CAMTA1Q9Y6Y1 1673 aa30.3■■■□□ 2.44
CKLF-205ENST00000417030 NME9Q86XW9 330 aa30.29■■■□□ 2.44
CKLF-205ENST00000417030 ARHGEF25Q86VW2 580 aa30.28■■■□□ 2.44
CKLF-205ENST00000417030 KIF7Q2M1P5 1343 aa30.27■■■□□ 2.44
CKLF-205ENST00000417030 KRT27Q7Z3Y8 459 aa30.27■■■□□ 2.44
CKLF-205ENST00000417030 ZRANB1Q9UGI0 708 aa30.27■■■□□ 2.44
CKLF-205ENST00000417030 LMO7Q8WWI1 1683 aa30.27■■■□□ 2.44
CKLF-205ENST00000417030 SOX12O15370 315 aa30.26■■■□□ 2.43
CKLF-205ENST00000417030 CCDC125Q86Z20 511 aa30.26■■■□□ 2.43
CKLF-205ENST00000417030 LARP1Q6PKG0 1096 aaKnown RBP30.25■■■□□ 2.43
CKLF-205ENST00000417030 USP35Q9P2H5 1018 aa30.23■■■□□ 2.43
Retrieved 100 of 20,778 RNA–protein pairs in 1176.1 ms