RNA–Protein interactions for RNA: ENST00000416789.1

ITGA6-205, Transcript of integrin subunit alpha 6, humanhuman

TSL 3

Gene ITGA6, Length 853 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-205ENST00000416789 PUS7Q96PZ0 661 aaKnown RBP12.09□□□□□ -0.47
ITGA6-205ENST00000416789 SOS2Q07890 1332 aaPredicted RBP12.09□□□□□ -0.47
ITGA6-205ENST00000416789 EVC2Q86UK5 1308 aa12.09□□□□□ -0.47
ITGA6-205ENST00000416789 MINK1Q8N4C8 1332 aaPredicted RBP12.09□□□□□ -0.47
ITGA6-205ENST00000416789 SAFB2Q14151 953 aaKnown RBP eCLIP12.08□□□□□ -0.48
ITGA6-205ENST00000416789 SPATA31A6Q5VVP1 1343 aa12.08□□□□□ -0.48
ITGA6-205ENST00000416789 BRD4O60885 1362 aaPredicted RBP12.07□□□□□ -0.48
ITGA6-205ENST00000416789 C19orf67A6NJJ6 358 aa12.07□□□□□ -0.48
ITGA6-205ENST00000416789 PSME1Q06323 249 aa12.07□□□□□ -0.48
ITGA6-205ENST00000416789 PHF8Q9UPP1 1060 aa12.07□□□□□ -0.48
ITGA6-205ENST00000416789 COL22A1Q8NFW1 1626 aaPredicted RBP12.07□□□□□ -0.48
ITGA6-205ENST00000416789 VASPP50552 380 aaPredicted RBP12.06□□□□□ -0.48
ITGA6-205ENST00000416789 ORAI2Q96SN7 254 aa12.06□□□□□ -0.48
ITGA6-205ENST00000416789 CCDC61Q9Y6R9 512 aa12.06□□□□□ -0.48
ITGA6-205ENST00000416789 ATP7BP35670 1465 aa12.06□□□□□ -0.48
ITGA6-205ENST00000416789 SBNO1A3KN83 1393 aa12.05□□□□□ -0.48
ITGA6-205ENST00000416789 ATAD2Q6PL18 1390 aa12.05□□□□□ -0.48
ITGA6-205ENST00000416789 MIER1Q8N108 512 aa12.05□□□□□ -0.48
ITGA6-205ENST00000416789 CDK19Q9BWU1 502 aa12.05□□□□□ -0.48
ITGA6-205ENST00000416789 PXDNQ92626 1479 aa12.05□□□□□ -0.48
ITGA6-205ENST00000416789 PLEKHG3A1L390 1219 aa12.04□□□□□ -0.48
ITGA6-205ENST00000416789 EVX2Q03828 476 aa12.04□□□□□ -0.48
ITGA6-205ENST00000416789 SP7Q8TDD2 431 aaPredicted RBP12.04□□□□□ -0.48
ITGA6-205ENST00000416789 NUDT16Q96DE0 195 aaKnown RBP12.04□□□□□ -0.48
ITGA6-205ENST00000416789 HIRIP3Q9BW71 556 aaPredicted RBP12.04□□□□□ -0.48
ITGA6-205ENST00000416789 CDCA8Q53HL2 280 aa12.03□□□□□ -0.48
ITGA6-205ENST00000416789 MED1Q15648 1581 aaPredicted RBP12.03□□□□□ -0.48
ITGA6-205ENST00000416789 POLR3AO14802 1390 aaPredicted RBP12.03□□□□□ -0.48
ITGA6-205ENST00000416789 NINLQ9Y2I6 1382 aa12.03□□□□□ -0.48
ITGA6-205ENST00000416789 TRPM3Q9HCF6 1732 aaPredicted RBP12.03□□□□□ -0.48
ITGA6-205ENST00000416789 MARF1Q9Y4F3 1742 aaKnown RBP12.03□□□□□ -0.48
ITGA6-205ENST00000416789 AKAP12Q02952 1782 aa12.02□□□□□ -0.48
ITGA6-205ENST00000416789 PLEKHG5O94827 1062 aa12.02□□□□□ -0.49
ITGA6-205ENST00000416789 SRPK2P78362 688 aaKnown RBP12.02□□□□□ -0.49
ITGA6-205ENST00000416789 ARHGEF10O15013 1369 aa12.02□□□□□ -0.49
ITGA6-205ENST00000416789 FOXO3O43524 673 aa12.01□□□□□ -0.49
ITGA6-205ENST00000416789 MNX1P50219 401 aaPredicted RBP12.01□□□□□ -0.49
ITGA6-205ENST00000416789 KRT28Q7Z3Y7 464 aa12.01□□□□□ -0.49
ITGA6-205ENST00000416789 PRR36Q9H6K5 1346 aa12.01□□□□□ -0.49
ITGA6-205ENST00000416789 USP47Q96K76 1375 aa12.01□□□□□ -0.49
ITGA6-205ENST00000416789 ALS2Q96Q42 1657 aa12□□□□□ -0.49
ITGA6-205ENST00000416789 NUTM2FA1L443 756 aa12□□□□□ -0.49
ITGA6-205ENST00000416789 PLCD3Q8N3E9 789 aa12□□□□□ -0.49
ITGA6-205ENST00000416789 NGDNQ8NEJ9 315 aaKnown RBP12□□□□□ -0.49
ITGA6-205ENST00000416789 PNPLA6Q8IY17 1366 aa12□□□□□ -0.49
ITGA6-205ENST00000416789 TNS3Q68CZ2 1445 aa12□□□□□ -0.49
ITGA6-205ENST00000416789 PPIP5K1Q6PFW1 1433 aa12□□□□□ -0.49
ITGA6-205ENST00000416789 CD44P16070 742 aaKnown RBP11.99□□□□□ -0.49
ITGA6-205ENST00000416789 TMF1P82094 1093 aa11.99□□□□□ -0.49
ITGA6-205ENST00000416789 SPATA31A3Q5VYP0 1347 aa11.99□□□□□ -0.49
ITGA6-205ENST00000416789 ST20-MTHFSA0A0A6YYL1 179 aa11.98□□□□□ -0.49
ITGA6-205ENST00000416789 MON2Q7Z3U7 1717 aa11.97□□□□□ -0.49
ITGA6-205ENST00000416789 EIF4G2P78344 907 aaKnown RBP eCLIP11.97□□□□□ -0.49
ITGA6-205ENST00000416789 TESK2Q96S53 571 aa11.97□□□□□ -0.49
ITGA6-205ENST00000416789 ACEP12821 1306 aa11.96□□□□□ -0.49
ITGA6-205ENST00000416789 PMFBP1Q8TBY8 1022 aa11.96□□□□□ -0.49
ITGA6-205ENST00000416789 CABP2Q9NPB3 220 aa11.96□□□□□ -0.49
ITGA6-205ENST00000416789 ABCA3Q99758 1704 aa11.96□□□□□ -0.49
ITGA6-205ENST00000416789 DDX17Q92841 729 aaKnown RBP11.94□□□□□ -0.5
ITGA6-205ENST00000416789 CRYBG1Q9Y4K1 1723 aa11.94□□□□□ -0.5
ITGA6-205ENST00000416789 USP6P35125 1406 aa11.94□□□□□ -0.5
ITGA6-205ENST00000416789 CPSF1Q10570 1443 aaKnown RBP11.94□□□□□ -0.5
ITGA6-205ENST00000416789 USP54Q70EL1 1684 aa11.94□□□□□ -0.5
ITGA6-205ENST00000416789 TTC21AQ8NDW8 1320 aa11.93□□□□□ -0.5
ITGA6-205ENST00000416789 MEX3CQ5U5Q3 659 aaKnown RBP11.93□□□□□ -0.5
ITGA6-205ENST00000416789 HDGFL2Q7Z4V5 671 aaPredicted RBP11.93□□□□□ -0.5
ITGA6-205ENST00000416789 TERF2IPQ9NYB0 399 aa11.93□□□□□ -0.5
ITGA6-205ENST00000416789 CABP1Q9NZU7 370 aa11.93□□□□□ -0.5
ITGA6-205ENST00000416789 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.93□□□□□ -0.5
ITGA6-205ENST00000416789 NWD2Q9ULI1 1742 aa11.93□□□□□ -0.5
ITGA6-205ENST00000416789 DISP3Q9P2K9 1392 aa11.92□□□□□ -0.5
ITGA6-205ENST00000416789 NRKQ7Z2Y5 1582 aa11.92□□□□□ -0.5
ITGA6-205ENST00000416789 ZNF772Q68DY9 489 aaPredicted RBP11.92□□□□□ -0.5
ITGA6-205ENST00000416789 LRP6O75581 1613 aa11.92□□□□□ -0.5
ITGA6-205ENST00000416789 IFNLR1Q8IU57 520 aaPredicted RBP11.91□□□□□ -0.5
ITGA6-205ENST00000416789 SSH2Q76I76 1423 aa11.91□□□□□ -0.5
ITGA6-205ENST00000416789 PHRF1Q9P1Y6 1649 aaKnown RBP11.9□□□□□ -0.5
ITGA6-205ENST00000416789 XPCQ01831 940 aaPredicted RBP11.9□□□□□ -0.5
ITGA6-205ENST00000416789 NLRP13Q86W25 1043 aa11.9□□□□□ -0.5
ITGA6-205ENST00000416789 KTN1Q86UP2 1357 aaKnown RBP11.9□□□□□ -0.5
ITGA6-205ENST00000416789 COL14A1Q05707 1796 aaKnown RBP11.9□□□□□ -0.51
ITGA6-205ENST00000416789 EDC4Q6P2E9 1401 aaKnown RBP11.89□□□□□ -0.51
ITGA6-205ENST00000416789 PAK3O75914 559 aaPredicted RBP11.89□□□□□ -0.51
ITGA6-205ENST00000416789 HAP1P54257 671 aaPredicted RBP11.89□□□□□ -0.51
ITGA6-205ENST00000416789 ABTB2Q8N961 1025 aa11.89□□□□□ -0.51
ITGA6-205ENST00000416789 ZBTB47Q9UFB7 747 aaPredicted RBP11.89□□□□□ -0.51
ITGA6-205ENST00000416789 ANKRD36BQ8N2N9 1353 aa11.89□□□□□ -0.51
ITGA6-205ENST00000416789 NUTM2BA6NNL0 878 aaPredicted RBP11.88□□□□□ -0.51
ITGA6-205ENST00000416789 NUTM2EB1AL46 878 aaPredicted RBP11.88□□□□□ -0.51
ITGA6-205ENST00000416789 ZEB1P37275 1124 aaPredicted RBP11.88□□□□□ -0.51
ITGA6-205ENST00000416789 LMOD2Q6P5Q4 547 aa11.88□□□□□ -0.51
ITGA6-205ENST00000416789 NUTM2AQ8IVF1 878 aaPredicted RBP11.88□□□□□ -0.51
ITGA6-205ENST00000416789 TMC1Q8TDI8 760 aa11.88□□□□□ -0.51
ITGA6-205ENST00000416789 ZRANB1Q9UGI0 708 aa11.88□□□□□ -0.51
ITGA6-205ENST00000416789 CD163L1Q9NR16 1453 aa11.88□□□□□ -0.51
ITGA6-205ENST00000416789 PIK3C2AO00443 1686 aa11.87□□□□□ -0.51
ITGA6-205ENST00000416789 MYOM1P52179 1685 aa11.87□□□□□ -0.51
ITGA6-205ENST00000416789 HSPA5P11021 654 aaKnown RBP11.87□□□□□ -0.51
ITGA6-205ENST00000416789 FNBP4Q8N3X1 1017 aaPredicted RBP11.87□□□□□ -0.51
ITGA6-205ENST00000416789 PLCH1Q4KWH8 1693 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms