RNA–Protein interactions for RNA: ENST00000416343.2

LINC01349-201, Transcript of long intergenic non-protein coding RNA 1349, humanhuman

TSL 3 BASIC

Gene LINC01349, Length 497 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01349-201ENST00000416343 SH3BP2P78314 561 aa5.64□□□□□ -1.51
LINC01349-201ENST00000416343 DIEXFQ68CQ4 756 aaKnown RBP5.64□□□□□ -1.51
LINC01349-201ENST00000416343 TRIM46Q7Z4K8 759 aa5.64□□□□□ -1.51
LINC01349-201ENST00000416343 NUTM1Q86Y26 1132 aa5.64□□□□□ -1.51
LINC01349-201ENST00000416343 SPIRE2Q8WWL2 714 aa5.64□□□□□ -1.51
LINC01349-201ENST00000416343 EVA1BQ9NVM1 165 aa5.64□□□□□ -1.51
LINC01349-201ENST00000416343 MS4A1P11836 297 aa5.63□□□□□ -1.51
LINC01349-201ENST00000416343 PRKCSHP14314 528 aaPredicted RBP5.63□□□□□ -1.51
LINC01349-201ENST00000416343 SSTR3P32745 418 aaPredicted RBP5.63□□□□□ -1.51
LINC01349-201ENST00000416343 PTPRNQ16849 979 aa5.63□□□□□ -1.51
LINC01349-201ENST00000416343 DESI1Q6ICB0 168 aa5.63□□□□□ -1.51
LINC01349-201ENST00000416343 FAM9AQ8IZU1 332 aaPredicted RBP5.63□□□□□ -1.51
LINC01349-201ENST00000416343 MOXD2PA6NHM9 499 aa5.62□□□□□ -1.51
LINC01349-201ENST00000416343 LORP23490 312 aaPredicted RBP5.62□□□□□ -1.51
LINC01349-201ENST00000416343 GJA5P36382 358 aa5.62□□□□□ -1.51
LINC01349-201ENST00000416343 AMHR2Q16671 573 aa5.62□□□□□ -1.51
LINC01349-201ENST00000416343 BARGINQ6ZT62 677 aa5.62□□□□□ -1.51
LINC01349-201ENST00000416343 MPNDQ8N594 471 aa5.62□□□□□ -1.51
LINC01349-201ENST00000416343 EHBP1Q8NDI1 1231 aa5.62□□□□□ -1.51
LINC01349-201ENST00000416343 LOC105371045A0A1W2PR82 267 aa5.61□□□□□ -1.51
LINC01349-201ENST00000416343 C6orf229H3BNL8 230 aa5.61□□□□□ -1.51
LINC01349-201ENST00000416343 ZMYND10O75800 440 aa5.61□□□□□ -1.51
LINC01349-201ENST00000416343 NDUFV2P19404 249 aa5.61□□□□□ -1.51
LINC01349-201ENST00000416343 KRTAP5-3Q6L8H2 238 aa5.61□□□□□ -1.51
LINC01349-201ENST00000416343 NPAS3Q8IXF0 933 aa5.61□□□□□ -1.51
LINC01349-201ENST00000416343 UNC93B1Q9H1C4 597 aa5.61□□□□□ -1.51
LINC01349-201ENST00000416343 CAPN5O15484 640 aaPredicted RBP5.6□□□□□ -1.51
LINC01349-201ENST00000416343 BMP1P13497 986 aa5.6□□□□□ -1.51
LINC01349-201ENST00000416343 KCNH2Q12809 1159 aa5.6□□□□□ -1.51
LINC01349-201ENST00000416343 LCE1DQ5T752 114 aa5.6□□□□□ -1.51
LINC01349-201ENST00000416343 PRR7Q8TB68 274 aa5.6□□□□□ -1.51
LINC01349-201ENST00000416343 KLF16Q9BXK1 252 aaPredicted RBP5.6□□□□□ -1.51
LINC01349-201ENST00000416343 KRTAP9-8Q9BYQ0 159 aa5.6□□□□□ -1.51
LINC01349-201ENST00000416343 KRTAP4-2Q9BYR5 136 aa5.6□□□□□ -1.51
LINC01349-201ENST00000416343 NXF1Q9UBU9 619 aaKnown RBP5.6□□□□□ -1.51
LINC01349-201ENST00000416343 SHROOM4Q9ULL8 1493 aa5.59□□□□□ -1.51
LINC01349-201ENST00000416343 SPDYE5A6NIY4 337 aa5.59□□□□□ -1.51
LINC01349-201ENST00000416343 ZNF511Q8NB15 262 aa5.59□□□□□ -1.51
LINC01349-201ENST00000416343 BAP1Q92560 729 aa5.59□□□□□ -1.51
LINC01349-201ENST00000416343 WASF2Q9Y6W5 498 aa5.59□□□□□ -1.51
LINC01349-201ENST00000416343 H3BM21 787 aa5.58□□□□□ -1.52
LINC01349-201ENST00000416343 VARSP26640 1264 aaKnown RBP5.58□□□□□ -1.52
LINC01349-201ENST00000416343 MTMR2Q13614 643 aa5.58□□□□□ -1.52
LINC01349-201ENST00000416343 LYPD8Q6UX82 237 aa5.58□□□□□ -1.52
LINC01349-201ENST00000416343 KRI1Q8N9T8 703 aaKnown RBP5.58□□□□□ -1.52
LINC01349-201ENST00000416343 GIGYF2Q6Y7W6 1299 aaKnown RBP5.57□□□□□ -1.52
LINC01349-201ENST00000416343 TLL2Q9Y6L7 1015 aa5.57□□□□□ -1.52
LINC01349-201ENST00000416343 GMPRP36959 345 aa5.56□□□□□ -1.52
LINC01349-201ENST00000416343 LINC01559Q495D7 138 aa5.56□□□□□ -1.52
LINC01349-201ENST00000416343 RSBN1LQ6PCB5 846 aaPredicted RBP5.56□□□□□ -1.52
LINC01349-201ENST00000416343 SLC16A10Q8TF71 515 aa5.56□□□□□ -1.52
LINC01349-201ENST00000416343 ZFP42Q96MM3 310 aa5.56□□□□□ -1.52
LINC01349-201ENST00000416343 CDK15Q96Q40 435 aa5.56□□□□□ -1.52
LINC01349-201ENST00000416343 BEGAINQ9BUH8 593 aa5.56□□□□□ -1.52
LINC01349-201ENST00000416343 PCDHB15Q9Y5E8 787 aa5.56□□□□□ -1.52
LINC01349-201ENST00000416343 ERBB4Q15303 1308 aa5.55□□□□□ -1.52
LINC01349-201ENST00000416343 PLEKHG3A1L390 1219 aa5.55□□□□□ -1.52
LINC01349-201ENST00000416343 CFAP99D6REC4 459 aa5.55□□□□□ -1.52
LINC01349-201ENST00000416343 SPTLC1O15269 473 aa5.55□□□□□ -1.52
LINC01349-201ENST00000416343 F12P00748 615 aaPredicted RBP5.55□□□□□ -1.52
LINC01349-201ENST00000416343 TIMP2P16035 220 aa5.55□□□□□ -1.52
LINC01349-201ENST00000416343 NNTQ13423 1086 aa5.55□□□□□ -1.52
LINC01349-201ENST00000416343 TTLL12Q14166 644 aaPredicted RBP5.55□□□□□ -1.52
LINC01349-201ENST00000416343 ZSCAN1Q8NBB4 408 aa5.55□□□□□ -1.52
LINC01349-201ENST00000416343 ZC3H15Q8WU90 426 aaKnown RBP5.55□□□□□ -1.52
LINC01349-201ENST00000416343 IRF7Q92985 503 aa5.55□□□□□ -1.52
LINC01349-201ENST00000416343 TBC1D2Q9BYX2 928 aa5.55□□□□□ -1.52
LINC01349-201ENST00000416343 PARP9Q8IXQ6 854 aa5.54□□□□□ -1.52
LINC01349-201ENST00000416343 ADH1CP00326 375 aa5.53□□□□□ -1.52
LINC01349-201ENST00000416343 VSIG8P0DPA2 414 aa5.53□□□□□ -1.52
LINC01349-201ENST00000416343 DIXDC1Q155Q3 683 aa5.53□□□□□ -1.52
LINC01349-201ENST00000416343 PRPF38BQ5VTL8 546 aaKnown RBP5.53□□□□□ -1.52
LINC01349-201ENST00000416343 MRPL14Q6P1L8 145 aaKnown RBP5.53□□□□□ -1.52
LINC01349-201ENST00000416343 CCER1Q8TC90 406 aaPredicted RBP5.53□□□□□ -1.52
LINC01349-201ENST00000416343 TRIM66O15016 1216 aa5.52□□□□□ -1.53
LINC01349-201ENST00000416343 GRM5P41594 1212 aa5.52□□□□□ -1.53
LINC01349-201ENST00000416343 VEGFBP49765 207 aa5.52□□□□□ -1.53
LINC01349-201ENST00000416343 C4orf48Q5BLP8 95 aa5.52□□□□□ -1.53
LINC01349-201ENST00000416343 FOXJ1Q92949 421 aa5.52□□□□□ -1.53
LINC01349-201ENST00000416343 KRTAP4-9Q9BYQ8 210 aa5.52□□□□□ -1.53
LINC01349-201ENST00000416343 WDR4P57081 412 aaKnown RBP5.51□□□□□ -1.53
LINC01349-201ENST00000416343 FAM174AQ8TBP5 190 aa5.51□□□□□ -1.53
LINC01349-201ENST00000416343 ZBTB3Q9H5J0 574 aa5.51□□□□□ -1.53
LINC01349-201ENST00000416343 MAP10Q9P2G4 905 aa5.51□□□□□ -1.53
LINC01349-201ENST00000416343 PER1O15534 1290 aaPredicted RBP5.5□□□□□ -1.53
LINC01349-201ENST00000416343 NR3C2P08235 984 aa5.5□□□□□ -1.53
LINC01349-201ENST00000416343 KCNMA1Q12791 1236 aa5.5□□□□□ -1.53
LINC01349-201ENST00000416343 TUSC1Q2TAM9 212 aa5.5□□□□□ -1.53
LINC01349-201ENST00000416343 RIC3Q7Z5B4 369 aa5.5□□□□□ -1.53
LINC01349-201ENST00000416343 PURBQ96QR8 312 aaKnown RBP5.5□□□□□ -1.53
LINC01349-201ENST00000416343 C1QTNF2Q9BXJ5 285 aa5.5□□□□□ -1.53
LINC01349-201ENST00000416343 CTHP32929 405 aa5.49□□□□□ -1.53
LINC01349-201ENST00000416343 NR5A1Q13285 461 aa5.49□□□□□ -1.53
LINC01349-201ENST00000416343 SCARF1Q14162 830 aa5.49□□□□□ -1.53
LINC01349-201ENST00000416343 CABLES1Q8TDN4 633 aa5.49□□□□□ -1.53
LINC01349-201ENST00000416343 ITPKCQ96DU7 683 aa5.49□□□□□ -1.53
LINC01349-201ENST00000416343 SOBPA7XYQ1 873 aa5.48□□□□□ -1.53
LINC01349-201ENST00000416343 LILRB3O75022 631 aa5.48□□□□□ -1.53
LINC01349-201ENST00000416343 SH3RF1Q7Z6J0 888 aa5.48□□□□□ -1.53
LINC01349-201ENST00000416343 TMEM151AQ8N4L1 468 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms