RNA–Protein interactions for RNA: ENST00000416319.5

FAM3A-207, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 5

Gene FAM3A, Length 1,113 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-207ENST00000416319 TRPM3Q9HCF6 1732 aaPredicted RBP27.47■■□□□ 1.99
FAM3A-207ENST00000416319 SHPRHQ149N8 1683 aa27.46■■□□□ 1.99
FAM3A-207ENST00000416319 PAK3O75914 559 aaPredicted RBP27.45■■□□□ 1.98
FAM3A-207ENST00000416319 TTC21AQ8NDW8 1320 aa27.44■■□□□ 1.98
FAM3A-207ENST00000416319 TTC21BQ7Z4L5 1316 aa27.43■■□□□ 1.98
FAM3A-207ENST00000416319 EDC4Q6P2E9 1401 aaKnown RBP27.43■■□□□ 1.98
FAM3A-207ENST00000416319 AKAP12Q02952 1782 aa27.43■■□□□ 1.98
FAM3A-207ENST00000416319 COL22A1Q8NFW1 1626 aaPredicted RBP27.42■■□□□ 1.98
FAM3A-207ENST00000416319 POLR3GLQ9BT43 218 aa27.42■■□□□ 1.98
FAM3A-207ENST00000416319 CCDC7Q96M83 1385 aa27.42■■□□□ 1.98
FAM3A-207ENST00000416319 WASHC2AQ641Q2 1341 aa27.41■■□□□ 1.98
FAM3A-207ENST00000416319 ALS2Q96Q42 1657 aa27.4■■□□□ 1.98
FAM3A-207ENST00000416319 LMOD2Q6P5Q4 547 aa27.4■■□□□ 1.98
FAM3A-207ENST00000416319 MYOM1P52179 1685 aa27.4■■□□□ 1.98
FAM3A-207ENST00000416319 MON2Q7Z3U7 1717 aa27.39■■□□□ 1.98
FAM3A-207ENST00000416319 ABTB2Q8N961 1025 aa27.39■■□□□ 1.98
FAM3A-207ENST00000416319 NRKQ7Z2Y5 1582 aa27.38■■□□□ 1.97
FAM3A-207ENST00000416319 MED1Q15648 1581 aaPredicted RBP27.36■■□□□ 1.97
FAM3A-207ENST00000416319 NLRP13Q86W25 1043 aa27.35■■□□□ 1.97
FAM3A-207ENST00000416319 CARD14Q9BXL6 1004 aa27.34■■□□□ 1.97
FAM3A-207ENST00000416319 USP19O94966 1318 aa27.34■■□□□ 1.97
FAM3A-207ENST00000416319 USP31Q70CQ4 1352 aa27.34■■□□□ 1.97
FAM3A-207ENST00000416319 SUGP2Q8IX01 1082 aaKnown RBP eCLIP27.33■■□□□ 1.97
FAM3A-207ENST00000416319 NLRP6P59044 892 aa27.32■■□□□ 1.96
FAM3A-207ENST00000416319 PANK3Q9H999 370 aa27.32■■□□□ 1.96
FAM3A-207ENST00000416319 LRP6O75581 1613 aa27.31■■□□□ 1.96
FAM3A-207ENST00000416319 NUTM2BA6NNL0 878 aaPredicted RBP27.3■■□□□ 1.96
FAM3A-207ENST00000416319 NUTM2EB1AL46 878 aaPredicted RBP27.3■■□□□ 1.96
FAM3A-207ENST00000416319 NUTM2AQ8IVF1 878 aaPredicted RBP27.3■■□□□ 1.96
FAM3A-207ENST00000416319 NUTM2GQ5VZR2 741 aa27.29■■□□□ 1.96
FAM3A-207ENST00000416319 CABLES1Q8TDN4 633 aa27.29■■□□□ 1.96
FAM3A-207ENST00000416319 NSD3Q9BZ95 1437 aa27.29■■□□□ 1.96
FAM3A-207ENST00000416319 PIK3C2AO00443 1686 aa27.28■■□□□ 1.96
FAM3A-207ENST00000416319 NME9Q86XW9 330 aa27.28■■□□□ 1.96
FAM3A-207ENST00000416319 HAP1P54257 671 aaPredicted RBP27.26■■□□□ 1.95
FAM3A-207ENST00000416319 CGNL1Q0VF96 1302 aa27.25■■□□□ 1.95
FAM3A-207ENST00000416319 FYB1O15117 783 aa27.25■■□□□ 1.95
FAM3A-207ENST00000416319 GCP02774 474 aa27.24■■□□□ 1.95
FAM3A-207ENST00000416319 KCNH5Q8NCM2 988 aa27.24■■□□□ 1.95
FAM3A-207ENST00000416319 SLIT3O75094 1523 aa27.24■■□□□ 1.95
FAM3A-207ENST00000416319 OVOS2A0A0J9YW53 1432 aa27.24■■□□□ 1.95
FAM3A-207ENST00000416319 OVOS2Q6IE36 1432 aa27.24■■□□□ 1.95
FAM3A-207ENST00000416319 ADAMTS2O95450 1211 aa27.23■■□□□ 1.95
FAM3A-207ENST00000416319 MEX3CQ5U5Q3 659 aaKnown RBP27.23■■□□□ 1.95
FAM3A-207ENST00000416319 USP54Q70EL1 1684 aa27.22■■□□□ 1.95
FAM3A-207ENST00000416319 CRYBG1Q9Y4K1 1723 aa27.21■■□□□ 1.95
FAM3A-207ENST00000416319 COG3Q96JB2 828 aa27.21■■□□□ 1.95
FAM3A-207ENST00000416319 ZRANB1Q9UGI0 708 aa27.21■■□□□ 1.95
FAM3A-207ENST00000416319 CPDO75976 1380 aa27.21■■□□□ 1.95
FAM3A-207ENST00000416319 PER1O15534 1290 aaPredicted RBP27.2■■□□□ 1.94
FAM3A-207ENST00000416319 ABCA3Q99758 1704 aa27.2■■□□□ 1.94
FAM3A-207ENST00000416319 KNSTRNQ9Y448 316 aa27.2■■□□□ 1.94
FAM3A-207ENST00000416319 PLEKHG5O94827 1062 aa27.19■■□□□ 1.94
FAM3A-207ENST00000416319 NSD2O96028 1365 aa27.19■■□□□ 1.94
FAM3A-207ENST00000416319 PHRF1Q9P1Y6 1649 aaKnown RBP27.18■■□□□ 1.94
FAM3A-207ENST00000416319 FNBP4Q8N3X1 1017 aaPredicted RBP27.17■■□□□ 1.94
FAM3A-207ENST00000416319 C8orf37Q96NL8 207 aa27.17■■□□□ 1.94
FAM3A-207ENST00000416319 GGNBP2Q9H3C7 697 aa27.17■■□□□ 1.94
FAM3A-207ENST00000416319 KIAA0232Q92628 1395 aa27.15■■□□□ 1.94
FAM3A-207ENST00000416319 NGLY1Q96IV0 654 aa27.15■■□□□ 1.94
FAM3A-207ENST00000416319 MARF1Q9Y4F3 1742 aaKnown RBP27.15■■□□□ 1.94
FAM3A-207ENST00000416319 FAM83GA6ND36 823 aa27.14■■□□□ 1.94
FAM3A-207ENST00000416319 AMER1Q5JTC6 1135 aaPredicted RBP27.14■■□□□ 1.94
FAM3A-207ENST00000416319 NFAT5O94916 1531 aa27.13■■□□□ 1.93
FAM3A-207ENST00000416319 ZNF316A6NFI3 1004 aaPredicted RBP27.13■■□□□ 1.93
FAM3A-207ENST00000416319 ZC3H6P61129 1189 aaKnown RBP27.13■■□□□ 1.93
FAM3A-207ENST00000416319 PRDM11Q9NQV5 511 aa27.13■■□□□ 1.93
FAM3A-207ENST00000416319 NPC1L1Q9UHC9 1359 aa27.12■■□□□ 1.93
FAM3A-207ENST00000416319 ARHGEF25Q86VW2 580 aa27.12■■□□□ 1.93
FAM3A-207ENST00000416319 SLIT2O94813 1529 aa27.11■■□□□ 1.93
FAM3A-207ENST00000416319 PHF23Q9BUL5 403 aaPredicted RBP27.11■■□□□ 1.93
FAM3A-207ENST00000416319 AFF2P51816 1311 aa27.1■■□□□ 1.93
FAM3A-207ENST00000416319 AATKQ6ZMQ8 1374 aa27.09■■□□□ 1.93
FAM3A-207ENST00000416319 ZNF772Q68DY9 489 aaPredicted RBP27.09■■□□□ 1.93
FAM3A-207ENST00000416319 KIF20BQ96Q89 1820 aa27.08■■□□□ 1.93
FAM3A-207ENST00000416319 RGS17Q9UGC6 210 aaPredicted RBP27.07■■□□□ 1.92
FAM3A-207ENST00000416319 COL14A1Q05707 1796 aaKnown RBP27.07■■□□□ 1.92
FAM3A-207ENST00000416319 SOX12O15370 315 aa27.06■■□□□ 1.92
FAM3A-207ENST00000416319 USP21Q9UK80 565 aa27.06■■□□□ 1.92
FAM3A-207ENST00000416319 BCL9LQ86UU0 1499 aa27.06■■□□□ 1.92
FAM3A-207ENST00000416319 CHRNA2Q15822 529 aa27.05■■□□□ 1.92
FAM3A-207ENST00000416319 UNC5CLQ8IV45 518 aa27.05■■□□□ 1.92
FAM3A-207ENST00000416319 ABCC6O95255 1503 aa27.05■■□□□ 1.92
FAM3A-207ENST00000416319 DDX10Q13206 875 aaKnown RBP27.03■■□□□ 1.92
FAM3A-207ENST00000416319 BTG4Q9NY30 223 aa27.03■■□□□ 1.92
FAM3A-207ENST00000416319 MORC1Q86VD1 984 aa27.02■■□□□ 1.92
FAM3A-207ENST00000416319 KIF24Q5T7B8 1368 aa27.01■■□□□ 1.91
FAM3A-207ENST00000416319 MAP3K19Q56UN5 1328 aa27■■□□□ 1.91
FAM3A-207ENST00000416319 NWD2Q9ULI1 1742 aa27■■□□□ 1.91
FAM3A-207ENST00000416319 TRPC5Q9UL62 973 aaPredicted RBP27■■□□□ 1.91
FAM3A-207ENST00000416319 LMO7Q8WWI1 1683 aa27■■□□□ 1.91
FAM3A-207ENST00000416319 RTL1A6NKG5 1358 aa26.99■■□□□ 1.91
FAM3A-207ENST00000416319 ANKRD26Q9UPS8 1709 aa26.99■■□□□ 1.91
FAM3A-207ENST00000416319 IP6K1Q92551 441 aa26.98■■□□□ 1.91
FAM3A-207ENST00000416319 CAMTA1Q9Y6Y1 1673 aa26.98■■□□□ 1.91
FAM3A-207ENST00000416319 ATRNO75882 1429 aa26.98■■□□□ 1.91
FAM3A-207ENST00000416319 ZBTB7CA1YPR0 619 aa26.97■■□□□ 1.91
FAM3A-207ENST00000416319 FBLN1P23142 703 aa26.97■■□□□ 1.91
FAM3A-207ENST00000416319 VPS72Q15906 364 aa26.97■■□□□ 1.91
FAM3A-207ENST00000416319 CC2D1BQ5T0F9 858 aaKnown RBP26.97■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms