RNA–Protein interactions for RNA: ENST00000415541.5

SIK3-203, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 3,816 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-203ENST00000415541 HMGN5P82970 282 aaKnown RBP9.67□□□□□ -0.86
SIK3-203ENST00000415541 BCL2L13Q9BXK5 485 aa9.67□□□□□ -0.86
SIK3-203ENST00000415541 PLA2R1Q13018 1463 aa9.67□□□□□ -0.86
SIK3-203ENST00000415541 NOL7Q9UMY1 257 aaKnown RBP9.67□□□□□ -0.86
SIK3-203ENST00000415541 USP19O94966 1318 aa9.66□□□□□ -0.86
SIK3-203ENST00000415541 AMPHP49418 695 aa9.66□□□□□ -0.86
SIK3-203ENST00000415541 ZNF771Q7L3S4 317 aaPredicted RBP9.66□□□□□ -0.86
SIK3-203ENST00000415541 HMOX1P09601 288 aa9.66□□□□□ -0.86
SIK3-203ENST00000415541 CBX1P83916 185 aa9.66□□□□□ -0.86
SIK3-203ENST00000415541 CLUAP1Q96AJ1 413 aa9.66□□□□□ -0.86
SIK3-203ENST00000415541 TBC1D32Q96NH3 1257 aa9.66□□□□□ -0.86
SIK3-203ENST00000415541 SHROOM2Q13796 1616 aa9.66□□□□□ -0.86
SIK3-203ENST00000415541 VGLL3A8MV65 326 aa9.66□□□□□ -0.86
SIK3-203ENST00000415541 KLHL34Q8N239 644 aa9.66□□□□□ -0.86
SIK3-203ENST00000415541 NPATQ14207 1427 aa9.65□□□□□ -0.86
SIK3-203ENST00000415541 NEO1Q92859 1461 aa9.65□□□□□ -0.86
SIK3-203ENST00000415541 UNC13BO14795 1591 aa9.65□□□□□ -0.86
SIK3-203ENST00000415541 IRX3P78415 501 aaPredicted RBP9.65□□□□□ -0.86
SIK3-203ENST00000415541 DNAJC2Q99543 621 aaKnown RBP9.65□□□□□ -0.86
SIK3-203ENST00000415541 CIZ1Q9ULV3 898 aaPredicted RBP9.65□□□□□ -0.86
SIK3-203ENST00000415541 PPP6R1Q9UPN7 881 aa9.65□□□□□ -0.86
SIK3-203ENST00000415541 MAST1Q9Y2H9 1570 aa9.65□□□□□ -0.87
SIK3-203ENST00000415541 CCDC66A2RUB6 948 aa9.65□□□□□ -0.87
SIK3-203ENST00000415541 ELL2O00472 640 aaPredicted RBP9.65□□□□□ -0.87
SIK3-203ENST00000415541 DIAPH1O60610 1272 aaKnown RBP9.65□□□□□ -0.87
SIK3-203ENST00000415541 BRD2P25440 801 aaKnown RBP9.65□□□□□ -0.87
SIK3-203ENST00000415541 XPCQ01831 940 aaPredicted RBP9.65□□□□□ -0.87
SIK3-203ENST00000415541 CCDC39Q9UFE4 941 aa9.65□□□□□ -0.87
SIK3-203ENST00000415541 NSD3Q9BZ95 1437 aa9.65□□□□□ -0.87
SIK3-203ENST00000415541 TSPOAP1O95153 1857 aa9.64□□□□□ -0.87
SIK3-203ENST00000415541 ZNF830Q96NB3 372 aaPredicted RBP9.64□□□□□ -0.87
SIK3-203ENST00000415541 CGNQ9P2M7 1197 aaKnown RBP9.64□□□□□ -0.87
SIK3-203ENST00000415541 UGGT1Q9NYU2 1555 aa9.64□□□□□ -0.87
SIK3-203ENST00000415541 ZMYM3Q14202 1370 aa9.64□□□□□ -0.87
SIK3-203ENST00000415541 FBLN1P23142 703 aa9.64□□□□□ -0.87
SIK3-203ENST00000415541 C20orf194Q5TEA3 1177 aa9.64□□□□□ -0.87
SIK3-203ENST00000415541 TEX2Q8IWB9 1127 aa9.64□□□□□ -0.87
SIK3-203ENST00000415541 PARD3Q8TEW0 1356 aa9.64□□□□□ -0.87
SIK3-203ENST00000415541 ATP10AO60312 1499 aa9.64□□□□□ -0.87
SIK3-203ENST00000415541 NUDT16Q96DE0 195 aaKnown RBP9.63□□□□□ -0.87
SIK3-203ENST00000415541 ZKSCAN5Q9Y2L8 839 aa9.63□□□□□ -0.87
SIK3-203ENST00000415541 TNRQ92752 1358 aa9.63□□□□□ -0.87
SIK3-203ENST00000415541 LAMC1P11047 1609 aa9.63□□□□□ -0.87
SIK3-203ENST00000415541 AMER1Q5JTC6 1135 aaPredicted RBP9.63□□□□□ -0.87
SIK3-203ENST00000415541 ANKLE2Q86XL3 938 aa9.63□□□□□ -0.87
SIK3-203ENST00000415541 TCP11L2Q8N4U5 519 aa9.63□□□□□ -0.87
SIK3-203ENST00000415541 PRIMPOLQ96LW4 560 aa9.63□□□□□ -0.87
SIK3-203ENST00000415541 PRDM15P57071 1507 aaPredicted RBP9.63□□□□□ -0.87
SIK3-203ENST00000415541 GPRASP1Q5JY77 1395 aa9.63□□□□□ -0.87
SIK3-203ENST00000415541 PER1O15534 1290 aaPredicted RBP9.62□□□□□ -0.87
SIK3-203ENST00000415541 GAS2L3Q86XJ1 694 aa9.62□□□□□ -0.87
SIK3-203ENST00000415541 AMOTL2Q9Y2J4 779 aa9.62□□□□□ -0.87
SIK3-203ENST00000415541 PTMAP06454 111 aaKnown RBP9.62□□□□□ -0.87
SIK3-203ENST00000415541 NLRP6P59044 892 aa9.62□□□□□ -0.87
SIK3-203ENST00000415541 PSME1Q06323 249 aa9.62□□□□□ -0.87
SIK3-203ENST00000415541 CCDC61Q9Y6R9 512 aa9.62□□□□□ -0.87
SIK3-203ENST00000415541 INSRP06213 1382 aa9.62□□□□□ -0.87
SIK3-203ENST00000415541 ZFYVE16Q7Z3T8 1539 aa9.61□□□□□ -0.87
SIK3-203ENST00000415541 CARD14Q9BXL6 1004 aa9.61□□□□□ -0.87
SIK3-203ENST00000415541 IQGAP3Q86VI3 1631 aa9.61□□□□□ -0.87
SIK3-203ENST00000415541 SEC24BO95487 1268 aa9.61□□□□□ -0.87
SIK3-203ENST00000415541 RBM25P49756 843 aaKnown RBP9.61□□□□□ -0.87
SIK3-203ENST00000415541 RTF1Q92541 710 aaKnown RBP9.61□□□□□ -0.87
SIK3-203ENST00000415541 RUNDC1Q96C34 613 aa9.61□□□□□ -0.87
SIK3-203ENST00000415541 COL17A1Q9UMD9 1497 aaPredicted RBP9.61□□□□□ -0.87
SIK3-203ENST00000415541 HSP90AB1P08238 724 aaKnown RBP9.61□□□□□ -0.87
SIK3-203ENST00000415541 RRS1Q15050 365 aaKnown RBP9.61□□□□□ -0.87
SIK3-203ENST00000415541 AEBP2Q6ZN18 517 aaPredicted RBP9.61□□□□□ -0.87
SIK3-203ENST00000415541 MYRIPQ8NFW9 859 aa9.61□□□□□ -0.87
SIK3-203ENST00000415541 ZFP91Q96JP5 570 aaPredicted RBP9.61□□□□□ -0.87
SIK3-203ENST00000415541 TSPYL1Q9H0U9 437 aa9.61□□□□□ -0.87
SIK3-203ENST00000415541 MLH3Q9UHC1 1453 aa9.61□□□□□ -0.87
SIK3-203ENST00000415541 PROSER2Q86WR7 435 aaPredicted RBP9.6□□□□□ -0.87
SIK3-203ENST00000415541 DDX49Q9Y6V7 483 aaKnown RBP9.6□□□□□ -0.87
SIK3-203ENST00000415541 NCKAP5LQ9HCH0 1330 aa9.6□□□□□ -0.87
SIK3-203ENST00000415541 KIAA2012Q0VF49 1180 aa9.6□□□□□ -0.87
SIK3-203ENST00000415541 ESCO1Q5FWF5 840 aa9.6□□□□□ -0.87
SIK3-203ENST00000415541 NME9Q86XW9 330 aa9.6□□□□□ -0.87
SIK3-203ENST00000415541 C22orf23Q9BZE7 217 aa9.6□□□□□ -0.87
SIK3-203ENST00000415541 PLXNC1O60486 1568 aa9.6□□□□□ -0.87
SIK3-203ENST00000415541 IBTKQ9P2D0 1353 aaPredicted RBP9.59□□□□□ -0.87
SIK3-203ENST00000415541 WASLO00401 505 aaPredicted RBP9.59□□□□□ -0.87
SIK3-203ENST00000415541 SMC4Q9NTJ3 1288 aa9.59□□□□□ -0.87
SIK3-203ENST00000415541 ATAD2Q6PL18 1390 aa9.59□□□□□ -0.87
SIK3-203ENST00000415541 CSB-PGBD3P0DP91 1061 aa9.59□□□□□ -0.87
SIK3-203ENST00000415541 MAGI2Q86UL8 1455 aa9.59□□□□□ -0.87
SIK3-203ENST00000415541 RIMS2Q9UQ26 1411 aa9.59□□□□□ -0.87
SIK3-203ENST00000415541 E9PSI1 815 aa9.59□□□□□ -0.87
SIK3-203ENST00000415541 CHAF1AQ13111 956 aaPredicted RBP9.59□□□□□ -0.87
SIK3-203ENST00000415541 TNPO1Q92973 898 aaKnown RBP9.59□□□□□ -0.87
SIK3-203ENST00000415541 RNF17Q9BXT8 1623 aaKnown RBP9.59□□□□□ -0.87
SIK3-203ENST00000415541 PDCL2Q8N4E4 241 aa9.58□□□□□ -0.88
SIK3-203ENST00000415541 ABTB2Q8N961 1025 aa9.58□□□□□ -0.88
SIK3-203ENST00000415541 KIF3AQ9Y496 699 aa9.58□□□□□ -0.88
SIK3-203ENST00000415541 KCNJ4P48050 445 aa9.58□□□□□ -0.88
SIK3-203ENST00000415541 BLMP54132 1417 aaPredicted RBP9.57□□□□□ -0.88
SIK3-203ENST00000415541 PRKAR2BP31323 418 aa9.57□□□□□ -0.88
SIK3-203ENST00000415541 NCBP3Q53F19 620 aaKnown RBP9.57□□□□□ -0.88
SIK3-203ENST00000415541 SLC20A2Q08357 652 aa9.57□□□□□ -0.88
SIK3-203ENST00000415541 KLHL40Q2TBA0 621 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms