RNA–Protein interactions for RNA: ENST00000414670.2

ITGB1-203, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 500 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-203ENST00000414670 PNISRQ8TF01 805 aaKnown RBP8.35□□□□□ -1.07
ITGB1-203ENST00000414670 GGNBP2Q9H3C7 697 aa8.35□□□□□ -1.07
ITGB1-203ENST00000414670 C19orf44Q9H6X5 657 aa8.35□□□□□ -1.07
ITGB1-203ENST00000414670 CHD2O14647 1828 aaKnown RBP8.35□□□□□ -1.07
ITGB1-203ENST00000414670 EDC4Q6P2E9 1401 aaKnown RBP8.35□□□□□ -1.07
ITGB1-203ENST00000414670 NCOA3Q9Y6Q9 1424 aa8.35□□□□□ -1.07
ITGB1-203ENST00000414670 PHF8Q9UPP1 1060 aa8.34□□□□□ -1.07
ITGB1-203ENST00000414670 CDC42BPGQ6DT37 1551 aa8.34□□□□□ -1.07
ITGB1-203ENST00000414670 POLR3AO14802 1390 aaPredicted RBP8.34□□□□□ -1.07
ITGB1-203ENST00000414670 TTC21BQ7Z4L5 1316 aa8.33□□□□□ -1.08
ITGB1-203ENST00000414670 USP32Q8NFA0 1604 aa8.33□□□□□ -1.08
ITGB1-203ENST00000414670 ATF3P18847 181 aa8.33□□□□□ -1.08
ITGB1-203ENST00000414670 TNNT2P45379 298 aaPredicted RBP8.33□□□□□ -1.08
ITGB1-203ENST00000414670 ZNF335Q9H4Z2 1342 aaPredicted RBP8.32□□□□□ -1.08
ITGB1-203ENST00000414670 USP6P35125 1406 aa8.32□□□□□ -1.08
ITGB1-203ENST00000414670 ESCO1Q5FWF5 840 aa8.32□□□□□ -1.08
ITGB1-203ENST00000414670 ERICH6Q7L0X2 663 aa8.32□□□□□ -1.08
ITGB1-203ENST00000414670 NME9Q86XW9 330 aa8.32□□□□□ -1.08
ITGB1-203ENST00000414670 COG3Q96JB2 828 aa8.32□□□□□ -1.08
ITGB1-203ENST00000414670 DCCP43146 1447 aa8.31□□□□□ -1.08
ITGB1-203ENST00000414670 NEFLP07196 543 aa8.31□□□□□ -1.08
ITGB1-203ENST00000414670 MTHFSP49914 203 aa8.31□□□□□ -1.08
ITGB1-203ENST00000414670 HNRNPUQ00839 825 aaKnown RBP eCLIP8.31□□□□□ -1.08
ITGB1-203ENST00000414670 FKBP8Q14318 412 aa8.31□□□□□ -1.08
ITGB1-203ENST00000414670 CADPS2Q86UW7 1296 aa8.31□□□□□ -1.08
ITGB1-203ENST00000414670 MSH6P52701 1360 aa8.31□□□□□ -1.08
ITGB1-203ENST00000414670 TTC21AQ8NDW8 1320 aa8.3□□□□□ -1.08
ITGB1-203ENST00000414670 STRCQ7RTU9 1775 aa8.3□□□□□ -1.08
ITGB1-203ENST00000414670 SSH2Q76I76 1423 aa8.3□□□□□ -1.08
ITGB1-203ENST00000414670 NALCNQ8IZF0 1738 aa8.3□□□□□ -1.08
ITGB1-203ENST00000414670 WDR43Q15061 677 aaKnown RBP eCLIP8.3□□□□□ -1.08
ITGB1-203ENST00000414670 CFAP53Q96M91 514 aa8.3□□□□□ -1.08
ITGB1-203ENST00000414670 ORAI2Q96SN7 254 aa8.3□□□□□ -1.08
ITGB1-203ENST00000414670 ZRANB1Q9UGI0 708 aa8.3□□□□□ -1.08
ITGB1-203ENST00000414670 TOPAZ1Q8N9V7 1692 aa8.3□□□□□ -1.08
ITGB1-203ENST00000414670 LRRC7Q96NW7 1537 aa8.29□□□□□ -1.08
ITGB1-203ENST00000414670 FMN2Q9NZ56 1722 aa8.29□□□□□ -1.08
ITGB1-203ENST00000414670 C1orf167Q5SNV9 1468 aa8.29□□□□□ -1.08
ITGB1-203ENST00000414670 INSRP06213 1382 aa8.28□□□□□ -1.08
ITGB1-203ENST00000414670 FOXO3O43524 673 aa8.28□□□□□ -1.08
ITGB1-203ENST00000414670 PSME1Q06323 249 aa8.28□□□□□ -1.08
ITGB1-203ENST00000414670 MST1RQ04912 1400 aa8.28□□□□□ -1.08
ITGB1-203ENST00000414670 AATKQ6ZMQ8 1374 aa8.27□□□□□ -1.09
ITGB1-203ENST00000414670 USP31Q70CQ4 1352 aa8.27□□□□□ -1.09
ITGB1-203ENST00000414670 PAK3O75914 559 aaPredicted RBP8.27□□□□□ -1.09
ITGB1-203ENST00000414670 POLKQ9UBT6 870 aa8.27□□□□□ -1.09
ITGB1-203ENST00000414670 ADAMTS8Q9UP79 889 aa8.27□□□□□ -1.09
ITGB1-203ENST00000414670 OVOS2A0A0J9YW53 1432 aa8.27□□□□□ -1.09
ITGB1-203ENST00000414670 OVOS2Q6IE36 1432 aa8.27□□□□□ -1.09
ITGB1-203ENST00000414670 FBLN1P23142 703 aa8.26□□□□□ -1.09
ITGB1-203ENST00000414670 NLRP6P59044 892 aa8.26□□□□□ -1.09
ITGB1-203ENST00000414670 KRT28Q7Z3Y7 464 aa8.26□□□□□ -1.09
ITGB1-203ENST00000414670 ABTB2Q8N961 1025 aa8.26□□□□□ -1.09
ITGB1-203ENST00000414670 ZBED9Q6R2W3 1325 aa8.26□□□□□ -1.09
ITGB1-203ENST00000414670 ITSN1Q15811 1721 aa8.26□□□□□ -1.09
ITGB1-203ENST00000414670 MON2Q7Z3U7 1717 aa8.26□□□□□ -1.09
ITGB1-203ENST00000414670 STRCP1A6NGW2 1772 aa8.25□□□□□ -1.09
ITGB1-203ENST00000414670 PNPLA6Q8IY17 1366 aa8.25□□□□□ -1.09
ITGB1-203ENST00000414670 PPM1GO15355 546 aaPredicted RBP8.25□□□□□ -1.09
ITGB1-203ENST00000414670 XPCQ01831 940 aaPredicted RBP8.25□□□□□ -1.09
ITGB1-203ENST00000414670 SLAIN2Q9P270 581 aa8.25□□□□□ -1.09
ITGB1-203ENST00000414670 NUDCQ9Y266 331 aa8.25□□□□□ -1.09
ITGB1-203ENST00000414670 EMILIN1Q9Y6C2 1016 aa8.25□□□□□ -1.09
ITGB1-203ENST00000414670 NRKQ7Z2Y5 1582 aa8.24□□□□□ -1.09
ITGB1-203ENST00000414670 BLMP54132 1417 aaPredicted RBP8.24□□□□□ -1.09
ITGB1-203ENST00000414670 DIAPH1O60610 1272 aaKnown RBP8.24□□□□□ -1.09
ITGB1-203ENST00000414670 RRS1Q15050 365 aaKnown RBP8.24□□□□□ -1.09
ITGB1-203ENST00000414670 NUTM2GQ5VZR2 741 aa8.24□□□□□ -1.09
ITGB1-203ENST00000414670 AKAP12Q02952 1782 aa8.24□□□□□ -1.09
ITGB1-203ENST00000414670 NPHP3Q7Z494 1330 aa8.24□□□□□ -1.09
ITGB1-203ENST00000414670 SMG6Q86US8 1419 aaKnown RBP8.23□□□□□ -1.09
ITGB1-203ENST00000414670 U2SURPO15042 1029 aaKnown RBP8.23□□□□□ -1.09
ITGB1-203ENST00000414670 SOX12O15370 315 aa8.23□□□□□ -1.09
ITGB1-203ENST00000414670 U2AF1L5P0DN76 240 aaPredicted RBP8.23□□□□□ -1.09
ITGB1-203ENST00000414670 U2AF1Q01081 240 aaKnown RBP eCLIP8.23□□□□□ -1.09
ITGB1-203ENST00000414670 BRINP3Q76B58 766 aa8.23□□□□□ -1.09
ITGB1-203ENST00000414670 COL3A1P02461 1466 aaPredicted RBP8.22□□□□□ -1.09
ITGB1-203ENST00000414670 SENP3-EIF4A1A0A087X0R7 540 aa8.22□□□□□ -1.09
ITGB1-203ENST00000414670 LMOD2Q6P5Q4 547 aa8.22□□□□□ -1.09
ITGB1-203ENST00000414670 CCDC146Q8IYE0 955 aa8.22□□□□□ -1.09
ITGB1-203ENST00000414670 DDX17Q92841 729 aaKnown RBP8.22□□□□□ -1.09
ITGB1-203ENST00000414670 MAP3K19Q56UN5 1328 aa8.22□□□□□ -1.09
ITGB1-203ENST00000414670 KIF20BQ96Q89 1820 aa8.22□□□□□ -1.09
ITGB1-203ENST00000414670 SBNO1A3KN83 1393 aa8.22□□□□□ -1.09
ITGB1-203ENST00000414670 CDK12Q9NYV4 1490 aaPredicted RBP8.21□□□□□ -1.09
ITGB1-203ENST00000414670 ANKRD26Q9UPS8 1709 aa8.21□□□□□ -1.09
ITGB1-203ENST00000414670 IL13P35225 146 aa8.21□□□□□ -1.1
ITGB1-203ENST00000414670 KCNH5Q8NCM2 988 aa8.21□□□□□ -1.1
ITGB1-203ENST00000414670 RUNDC1Q96C34 613 aa8.21□□□□□ -1.1
ITGB1-203ENST00000414670 KIF1AQ12756 1690 aa8.21□□□□□ -1.1
ITGB1-203ENST00000414670 APAF1O14727 1248 aa8.2□□□□□ -1.1
ITGB1-203ENST00000414670 AMPHP49418 695 aa8.2□□□□□ -1.1
ITGB1-203ENST00000414670 HSP90AB2PQ58FF8 381 aa8.2□□□□□ -1.1
ITGB1-203ENST00000414670 NGEFQ8N5V2 710 aa8.2□□□□□ -1.1
ITGB1-203ENST00000414670 PNNQ9H307 717 aaKnown RBP8.2□□□□□ -1.1
ITGB1-203ENST00000414670 SALL2Q9Y467 1007 aaPredicted RBP8.2□□□□□ -1.1
ITGB1-203ENST00000414670 LTBP4Q8N2S1 1624 aa8.2□□□□□ -1.1
ITGB1-203ENST00000414670 FLT4P35916 1363 aa8.2□□□□□ -1.1
ITGB1-203ENST00000414670 KIF24Q5T7B8 1368 aa8.2□□□□□ -1.1
ITGB1-203ENST00000414670 RGPD8O14715 1765 aaPredicted RBP8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms