RNA–Protein interactions for RNA: ENST00000414632.5

VPS41-205, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-205ENST00000414632 C3orf67Q6ZVT6 689 aa7.41□□□□□ -1.22
VPS41-205ENST00000414632 RBM33Q96EV2 1170 aaKnown RBP7.41□□□□□ -1.22
VPS41-205ENST00000414632 ZMYM3Q14202 1370 aa7.41□□□□□ -1.22
VPS41-205ENST00000414632 NCOA1Q15788 1441 aa7.41□□□□□ -1.22
VPS41-205ENST00000414632 ERBINQ96RT1 1412 aa7.41□□□□□ -1.22
VPS41-205ENST00000414632 PRDM15P57071 1507 aaPredicted RBP7.41□□□□□ -1.22
VPS41-205ENST00000414632 SETD1BQ9UPS6 1966 aaKnown RBP7.4□□□□□ -1.22
VPS41-205ENST00000414632 CLCN1P35523 988 aa7.4□□□□□ -1.22
VPS41-205ENST00000414632 TMUB1Q9BVT8 246 aa7.4□□□□□ -1.22
VPS41-205ENST00000414632 RRBP1Q9P2E9 1410 aaKnown RBP7.4□□□□□ -1.22
VPS41-205ENST00000414632 ZNF142P52746 1687 aaPredicted RBP7.4□□□□□ -1.23
VPS41-205ENST00000414632 GCC2Q8IWJ2 1684 aa7.4□□□□□ -1.23
VPS41-205ENST00000414632 STRCQ7RTU9 1775 aa7.39□□□□□ -1.23
VPS41-205ENST00000414632 WASHC2CQ9Y4E1 1318 aa7.39□□□□□ -1.23
VPS41-205ENST00000414632 MDM2Q00987 491 aaPredicted RBP7.39□□□□□ -1.23
VPS41-205ENST00000414632 PCDHGA10Q9Y5H3 936 aa7.39□□□□□ -1.23
VPS41-205ENST00000414632 UNC13BO14795 1591 aa7.38□□□□□ -1.23
VPS41-205ENST00000414632 CEP170BQ9Y4F5 1589 aaPredicted RBP7.38□□□□□ -1.23
VPS41-205ENST00000414632 UHRF1BP1Q6BDS2 1440 aa7.38□□□□□ -1.23
VPS41-205ENST00000414632 ONECUT3O60422 494 aaPredicted RBP7.38□□□□□ -1.23
VPS41-205ENST00000414632 FBXO31Q5XUX0 539 aaPredicted RBP7.38□□□□□ -1.23
VPS41-205ENST00000414632 SLAIN1Q8ND83 568 aa7.38□□□□□ -1.23
VPS41-205ENST00000414632 PHOX2BQ99453 314 aa7.38□□□□□ -1.23
VPS41-205ENST00000414632 ARID3AQ99856 593 aa7.38□□□□□ -1.23
VPS41-205ENST00000414632 C1orf115Q9H7X2 142 aa7.38□□□□□ -1.23
VPS41-205ENST00000414632 FAM135AQ9P2D6 1515 aa7.37□□□□□ -1.23
VPS41-205ENST00000414632 PZPP20742 1482 aa7.37□□□□□ -1.23
VPS41-205ENST00000414632 ANKRD50Q9ULJ7 1429 aa7.37□□□□□ -1.23
VPS41-205ENST00000414632 APBB1O00213 710 aa7.37□□□□□ -1.23
VPS41-205ENST00000414632 SSTR3P32745 418 aaPredicted RBP7.37□□□□□ -1.23
VPS41-205ENST00000414632 TSR1Q2NL82 804 aaKnown RBP7.37□□□□□ -1.23
VPS41-205ENST00000414632 SH3D19Q5HYK7 790 aa7.37□□□□□ -1.23
VPS41-205ENST00000414632 TYW1BQ6NUM6 668 aa7.37□□□□□ -1.23
VPS41-205ENST00000414632 GPCPD1Q9NPB8 672 aa7.37□□□□□ -1.23
VPS41-205ENST00000414632 NPATQ14207 1427 aa7.36□□□□□ -1.23
VPS41-205ENST00000414632 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.36□□□□□ -1.23
VPS41-205ENST00000414632 E9PCH4 1651 aa7.36□□□□□ -1.23
VPS41-205ENST00000414632 TET3O43151 1660 aa7.36□□□□□ -1.23
VPS41-205ENST00000414632 IQGAP3Q86VI3 1631 aa7.36□□□□□ -1.23
VPS41-205ENST00000414632 VWDEQ8N2E2 1590 aa7.36□□□□□ -1.23
VPS41-205ENST00000414632 EFCAB6Q5THR3 1501 aa7.36□□□□□ -1.23
VPS41-205ENST00000414632 MYO5BQ9ULV0 1848 aa7.36□□□□□ -1.23
VPS41-205ENST00000414632 POLR1AO95602 1720 aaPredicted RBP7.35□□□□□ -1.23
VPS41-205ENST00000414632 ROCK1Q13464 1354 aa7.35□□□□□ -1.23
VPS41-205ENST00000414632 KANK1Q14678 1352 aa7.35□□□□□ -1.23
VPS41-205ENST00000414632 SPATA31D1Q6ZQQ2 1576 aa7.35□□□□□ -1.23
VPS41-205ENST00000414632 FAM161AQ3B820 660 aa7.35□□□□□ -1.23
VPS41-205ENST00000414632 PCDHGA4Q9Y5G9 962 aa7.35□□□□□ -1.23
VPS41-205ENST00000414632 ERVK-7P63135 1459 aa7.35□□□□□ -1.23
VPS41-205ENST00000414632 UBR1Q8IWV7 1749 aa7.35□□□□□ -1.23
VPS41-205ENST00000414632 PIK3C2BO00750 1634 aa7.34□□□□□ -1.23
VPS41-205ENST00000414632 TNRQ92752 1358 aa7.34□□□□□ -1.23
VPS41-205ENST00000414632 SYNMO15061 1565 aa7.34□□□□□ -1.23
VPS41-205ENST00000414632 SKIV2LQ15477 1246 aaKnown RBP7.34□□□□□ -1.23
VPS41-205ENST00000414632 POTEGQ6S5H5 508 aa7.34□□□□□ -1.23
VPS41-205ENST00000414632 FBXW7Q969H0 707 aa7.34□□□□□ -1.23
VPS41-205ENST00000414632 BEGAINQ9BUH8 593 aa7.34□□□□□ -1.23
VPS41-205ENST00000414632 PCDH10Q9P2E7 1040 aa7.34□□□□□ -1.23
VPS41-205ENST00000414632 LMTK2Q8IWU2 1503 aa7.33□□□□□ -1.24
VPS41-205ENST00000414632 A2ML1A8K2U0 1454 aa7.33□□□□□ -1.24
VPS41-205ENST00000414632 A6NJR5 290 aa7.33□□□□□ -1.24
VPS41-205ENST00000414632 OATP04181 439 aa7.33□□□□□ -1.24
VPS41-205ENST00000414632 NLRP7Q8WX94 980 aa7.33□□□□□ -1.24
VPS41-205ENST00000414632 CLUAP1Q96AJ1 413 aa7.33□□□□□ -1.24
VPS41-205ENST00000414632 NAIPQ13075 1403 aa7.33□□□□□ -1.24
VPS41-205ENST00000414632 POTEB2H3BUK9 544 aa7.32□□□□□ -1.24
VPS41-205ENST00000414632 METTL3Q86U44 580 aaKnown RBP7.32□□□□□ -1.24
VPS41-205ENST00000414632 PROCA1Q8NCQ7 364 aaPredicted RBP7.32□□□□□ -1.24
VPS41-205ENST00000414632 FAM217BQ9NTX9 383 aaPredicted RBP7.32□□□□□ -1.24
VPS41-205ENST00000414632 POLR3EQ9NVU0 708 aa7.32□□□□□ -1.24
VPS41-205ENST00000414632 UGGT1Q9NYU2 1555 aa7.32□□□□□ -1.24
VPS41-205ENST00000414632 SPHKAPQ2M3C7 1700 aa7.32□□□□□ -1.24
VPS41-205ENST00000414632 TRAK2O60296 914 aa7.31□□□□□ -1.24
VPS41-205ENST00000414632 FOSBP53539 338 aa7.31□□□□□ -1.24
VPS41-205ENST00000414632 MCM6Q14566 821 aa7.31□□□□□ -1.24
VPS41-205ENST00000414632 C6orf132Q5T0Z8 1188 aa7.31□□□□□ -1.24
VPS41-205ENST00000414632 CERKQ8TCT0 537 aa7.31□□□□□ -1.24
VPS41-205ENST00000414632 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.31□□□□□ -1.24
VPS41-205ENST00000414632 NUP155O75694 1391 aa7.31□□□□□ -1.24
VPS41-205ENST00000414632 NEURL4Q96JN8 1562 aa7.3□□□□□ -1.24
VPS41-205ENST00000414632 HFM1A2PYH4 1435 aa7.3□□□□□ -1.24
VPS41-205ENST00000414632 ARHGAP31Q2M1Z3 1444 aa7.3□□□□□ -1.24
VPS41-205ENST00000414632 POTEJP0CG39 1038 aa7.3□□□□□ -1.24
VPS41-205ENST00000414632 PADI6Q6TGC4 694 aa7.3□□□□□ -1.24
VPS41-205ENST00000414632 MAMSTRQ6ZN01 415 aa7.3□□□□□ -1.24
VPS41-205ENST00000414632 PXYLP1Q8TE99 480 aa7.3□□□□□ -1.24
VPS41-205ENST00000414632 ADGRG1Q9Y653 693 aa7.3□□□□□ -1.24
VPS41-205ENST00000414632 NLRP1Q9C000 1473 aa7.3□□□□□ -1.24
VPS41-205ENST00000414632 TRIM52Q96A61 297 aa7.29□□□□□ -1.24
VPS41-205ENST00000414632 PODXL2Q9NZ53 605 aa7.29□□□□□ -1.24
VPS41-205ENST00000414632 IQGAP1P46940 1657 aa7.28□□□□□ -1.24
VPS41-205ENST00000414632 ADGRB3O60242 1522 aa7.28□□□□□ -1.24
VPS41-205ENST00000414632 ZDHHC16Q969W1 377 aa7.28□□□□□ -1.24
VPS41-205ENST00000414632 NOS1P29475 1434 aa7.27□□□□□ -1.24
VPS41-205ENST00000414632 TMEM131LA2VDJ0 1609 aa7.27□□□□□ -1.25
VPS41-205ENST00000414632 CLTCL1P53675 1640 aa7.27□□□□□ -1.25
VPS41-205ENST00000414632 KIF1BO60333 1816 aa7.27□□□□□ -1.25
VPS41-205ENST00000414632 MYSM1Q5VVJ2 828 aa7.27□□□□□ -1.25
VPS41-205ENST00000414632 ZNF454Q8N9F8 522 aa7.27□□□□□ -1.25
VPS41-205ENST00000414632 TTC13Q8NBP0 860 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms