RNA–Protein interactions for RNA: ENST00000414558.2

ATG4C-204, Transcript of autophagy related 4C cysteine peptidase, humanhuman

TSL 5

Gene ATG4C, Length 464 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4C-204ENST00000414558 RC3H1Q5TC82 1133 aaKnown RBP12.25□□□□□ -0.45
ATG4C-204ENST00000414558 MRGPRX2Q96LB1 330 aa12.25□□□□□ -0.45
ATG4C-204ENST00000414558 TOR4AQ9NXH8 423 aa12.25□□□□□ -0.45
ATG4C-204ENST00000414558 MAP10Q9P2G4 905 aa12.25□□□□□ -0.45
ATG4C-204ENST00000414558 FAM187AA6NFU0 413 aa12.24□□□□□ -0.45
ATG4C-204ENST00000414558 TTC24A2A3L6 582 aaPredicted RBP12.23□□□□□ -0.45
ATG4C-204ENST00000414558 SH3BP2P78314 561 aa12.23□□□□□ -0.45
ATG4C-204ENST00000414558 TRAF7Q6Q0C0 670 aa12.23□□□□□ -0.45
ATG4C-204ENST00000414558 LINC01559Q495D7 138 aa12.22□□□□□ -0.45
ATG4C-204ENST00000414558 FBXO31Q5XUX0 539 aaPredicted RBP12.22□□□□□ -0.45
ATG4C-204ENST00000414558 ZNF511Q8NB15 262 aa12.22□□□□□ -0.45
ATG4C-204ENST00000414558 SNIP1Q8TAD8 396 aaKnown RBP12.22□□□□□ -0.45
ATG4C-204ENST00000414558 BAP1Q92560 729 aa12.22□□□□□ -0.45
ATG4C-204ENST00000414558 CTDSPL2Q05D32 466 aa12.21□□□□□ -0.45
ATG4C-204ENST00000414558 EHBP1Q8NDI1 1231 aa12.21□□□□□ -0.45
ATG4C-204ENST00000414558 ARMC2Q8NEN0 867 aa12.2□□□□□ -0.46
ATG4C-204ENST00000414558 AP1G2O75843 785 aa12.19□□□□□ -0.46
ATG4C-204ENST00000414558 RFC5P40937 340 aa12.18□□□□□ -0.46
ATG4C-204ENST00000414558 LCE2BO14633 110 aa12.16□□□□□ -0.46
ATG4C-204ENST00000414558 NBPF14Q5TI25 921 aa12.16□□□□□ -0.46
ATG4C-204ENST00000414558 LRRN4Q8WUT4 740 aa12.16□□□□□ -0.46
ATG4C-204ENST00000414558 VARSP26640 1264 aaKnown RBP12.15□□□□□ -0.46
ATG4C-204ENST00000414558 MYT1Q01538 1121 aa12.14□□□□□ -0.47
ATG4C-204ENST00000414558 TMEM259Q4ZIN3 620 aa12.14□□□□□ -0.47
ATG4C-204ENST00000414558 SIAH2O43255 324 aa12.13□□□□□ -0.47
ATG4C-204ENST00000414558 SMPD1P17405 629 aa12.13□□□□□ -0.47
ATG4C-204ENST00000414558 J3QL48 77 aa12.12□□□□□ -0.47
ATG4C-204ENST00000414558 AVPP01185 164 aa12.12□□□□□ -0.47
ATG4C-204ENST00000414558 USP17L8P0C7I0 530 aa12.12□□□□□ -0.47
ATG4C-204ENST00000414558 AGERQ15109 404 aa12.12□□□□□ -0.47
ATG4C-204ENST00000414558 BPHLQ86WA6 291 aaPredicted RBP12.12□□□□□ -0.47
ATG4C-204ENST00000414558 GPKOWQ92917 476 aaPredicted RBP eCLIP12.12□□□□□ -0.47
ATG4C-204ENST00000414558 ALDH1A1P00352 501 aa12.11□□□□□ -0.47
ATG4C-204ENST00000414558 FOXJ1Q92949 421 aa12.11□□□□□ -0.47
ATG4C-204ENST00000414558 FAM174AQ8TBP5 190 aa12.1□□□□□ -0.47
ATG4C-204ENST00000414558 NR6A1Q15406 480 aa12.09□□□□□ -0.47
ATG4C-204ENST00000414558 CTC1Q2NKJ3 1217 aa12.09□□□□□ -0.47
ATG4C-204ENST00000414558 MPNDQ8N594 471 aa12.09□□□□□ -0.47
ATG4C-204ENST00000414558 CRIPAKQ8N1N5 446 aa12.08□□□□□ -0.48
ATG4C-204ENST00000414558 PNMA1Q8ND90 353 aa12.08□□□□□ -0.48
ATG4C-204ENST00000414558 FKBPLQ9UIM3 349 aa12.08□□□□□ -0.48
ATG4C-204ENST00000414558 WASF2Q9Y6W5 498 aa12.08□□□□□ -0.48
ATG4C-204ENST00000414558 ZC3H4Q9UPT8 1303 aaKnown RBP12.08□□□□□ -0.48
ATG4C-204ENST00000414558 TLL2Q9Y6L7 1015 aa12.07□□□□□ -0.48
ATG4C-204ENST00000414558 SH3BP5LQ7L8J4 393 aa12.06□□□□□ -0.48
ATG4C-204ENST00000414558 AAASQ9NRG9 546 aa12.06□□□□□ -0.48
ATG4C-204ENST00000414558 SMCPP49901 116 aaPredicted RBP12.05□□□□□ -0.48
ATG4C-204ENST00000414558 C4orf48Q5BLP8 95 aa12.05□□□□□ -0.48
ATG4C-204ENST00000414558 PDXDC2PQ6P474 469 aa12.05□□□□□ -0.48
ATG4C-204ENST00000414558 SH3RF1Q7Z6J0 888 aa12.05□□□□□ -0.48
ATG4C-204ENST00000414558 HMX1Q9NP08 348 aaPredicted RBP12.05□□□□□ -0.48
ATG4C-204ENST00000414558 AXIN1O15169 862 aa12.04□□□□□ -0.48
ATG4C-204ENST00000414558 ST8SIA5O15466 376 aa12.04□□□□□ -0.48
ATG4C-204ENST00000414558 HPS1Q92902 700 aa12.03□□□□□ -0.48
ATG4C-204ENST00000414558 MAGEB6P1A0A0J9YX57 407 aa12.02□□□□□ -0.49
ATG4C-204ENST00000414558 BANK1Q8NDB2 785 aa12.02□□□□□ -0.49
ATG4C-204ENST00000414558 CDK15Q96Q40 435 aa12.02□□□□□ -0.49
ATG4C-204ENST00000414558 C1QTNF2Q9BXJ5 285 aa12.02□□□□□ -0.49
ATG4C-204ENST00000414558 EPS8L1Q8TE68 723 aa12.01□□□□□ -0.49
ATG4C-204ENST00000414558 ADH1CP00326 375 aa12□□□□□ -0.49
ATG4C-204ENST00000414558 ARID5BQ14865 1188 aa12□□□□□ -0.49
ATG4C-204ENST00000414558 ARHGAP9Q9BRR9 750 aa12□□□□□ -0.49
ATG4C-204ENST00000414558 CARD14Q9BXL6 1004 aa12□□□□□ -0.49
ATG4C-204ENST00000414558 GPSM3Q9Y4H4 160 aa12□□□□□ -0.49
ATG4C-204ENST00000414558 PTK2Q05397 1052 aa11.99□□□□□ -0.49
ATG4C-204ENST00000414558 TRMT44Q8IYL2 757 aaKnown RBP11.99□□□□□ -0.49
ATG4C-204ENST00000414558 TRIM34Q9BYJ4 488 aa11.98□□□□□ -0.49
ATG4C-204ENST00000414558 SOCS7O14512 581 aa11.97□□□□□ -0.49
ATG4C-204ENST00000414558 NNTQ13423 1086 aa11.97□□□□□ -0.49
ATG4C-204ENST00000414558 MAP4K5Q9Y4K4 846 aa11.97□□□□□ -0.49
ATG4C-204ENST00000414558 APBB1O00213 710 aa11.96□□□□□ -0.49
ATG4C-204ENST00000414558 ERFEQ4G0M1 354 aa11.96□□□□□ -0.49
ATG4C-204ENST00000414558 ZNF787Q6DD87 383 aa11.96□□□□□ -0.49
ATG4C-204ENST00000414558 ZBTB33Q86T24 672 aa11.96□□□□□ -0.49
ATG4C-204ENST00000414558 NR5A1Q13285 461 aa11.95□□□□□ -0.5
ATG4C-204ENST00000414558 GJD4Q96KN9 370 aaPredicted RBP11.95□□□□□ -0.5
ATG4C-204ENST00000414558 VASH1Q7L8A9 365 aaPredicted RBP11.94□□□□□ -0.5
ATG4C-204ENST00000414558 CAPN5O15484 640 aaPredicted RBP11.93□□□□□ -0.5
ATG4C-204ENST00000414558 SLC10A4Q96EP9 437 aa11.93□□□□□ -0.5
ATG4C-204ENST00000414558 DACH1Q9UI36 760 aa11.93□□□□□ -0.5
ATG4C-204ENST00000414558 CDV3Q9UKY7 258 aaKnown RBP11.93□□□□□ -0.5
ATG4C-204ENST00000414558 GRM5P41594 1212 aa11.92□□□□□ -0.5
ATG4C-204ENST00000414558 FSHRP23945 695 aa11.91□□□□□ -0.5
ATG4C-204ENST00000414558 MTMR14Q8NCE2 650 aa11.91□□□□□ -0.5
ATG4C-204ENST00000414558 ADAM32Q8TC27 787 aa11.91□□□□□ -0.5
ATG4C-204ENST00000414558 ATP13A2Q9NQ11 1180 aa11.91□□□□□ -0.5
ATG4C-204ENST00000414558 OCSTAMPQ9BR26 566 aa11.9□□□□□ -0.5
ATG4C-204ENST00000414558 SNRKQ9NRH2 765 aa11.9□□□□□ -0.5
ATG4C-204ENST00000414558 WDR4P57081 412 aaKnown RBP11.89□□□□□ -0.51
ATG4C-204ENST00000414558 NDUFB9Q9Y6M9 179 aa11.89□□□□□ -0.51
ATG4C-204ENST00000414558 POTECB2RU33 542 aa11.87□□□□□ -0.51
ATG4C-204ENST00000414558 NR3C2P08235 984 aa11.87□□□□□ -0.51
ATG4C-204ENST00000414558 TIMP2P16035 220 aa11.87□□□□□ -0.51
ATG4C-204ENST00000414558 GMPR2Q9P2T1 348 aaKnown RBP11.87□□□□□ -0.51
ATG4C-204ENST00000414558 ZBBXA8MT70 800 aa11.86□□□□□ -0.51
ATG4C-204ENST00000414558 KLF16Q9BXK1 252 aaPredicted RBP11.86□□□□□ -0.51
ATG4C-204ENST00000414558 SENP2Q9HC62 589 aa11.86□□□□□ -0.51
ATG4C-204ENST00000414558 NBPF20Q3BBV1 942 aa11.85□□□□□ -0.51
ATG4C-204ENST00000414558 CCDC116Q8IYX3 515 aa11.85□□□□□ -0.51
ATG4C-204ENST00000414558 KCTD15Q96SI1 283 aaPredicted RBP11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms