RNA–Protein interactions for RNA: ENST00000414255.1

ZNF440-202, Transcript of zinc finger protein 440, humanhuman

TSL 2

Gene ZNF440, Length 796 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF440-202ENST00000414255 PARP9Q8IXQ6 854 aa8.72□□□□□ -1.01
ZNF440-202ENST00000414255 MPNDQ8N594 471 aa8.72□□□□□ -1.01
ZNF440-202ENST00000414255 AK7Q96M32 723 aa8.72□□□□□ -1.01
ZNF440-202ENST00000414255 TERTO14746 1132 aaKnown RBP8.71□□□□□ -1.02
ZNF440-202ENST00000414255 TRIM66O15016 1216 aa8.71□□□□□ -1.02
ZNF440-202ENST00000414255 CAPN5O15484 640 aaPredicted RBP8.71□□□□□ -1.02
ZNF440-202ENST00000414255 WIPF1O43516 503 aa8.71□□□□□ -1.02
ZNF440-202ENST00000414255 ZNF511Q8NB15 262 aa8.71□□□□□ -1.02
ZNF440-202ENST00000414255 BAP1Q92560 729 aa8.71□□□□□ -1.02
ZNF440-202ENST00000414255 ZBTB3Q9H5J0 574 aa8.71□□□□□ -1.02
ZNF440-202ENST00000414255 SPTLC1O15269 473 aa8.7□□□□□ -1.02
ZNF440-202ENST00000414255 LINC01559Q495D7 138 aa8.7□□□□□ -1.02
ZNF440-202ENST00000414255 PRPF38BQ5VTL8 546 aaKnown RBP8.7□□□□□ -1.02
ZNF440-202ENST00000414255 LYPD8Q6UX82 237 aa8.7□□□□□ -1.02
ZNF440-202ENST00000414255 INSM1Q01101 510 aaPredicted RBP8.69□□□□□ -1.02
ZNF440-202ENST00000414255 RB1CC1Q8TDY2 1594 aa8.69□□□□□ -1.02
ZNF440-202ENST00000414255 CTHP32929 405 aa8.67□□□□□ -1.02
ZNF440-202ENST00000414255 FAM174AQ8TBP5 190 aa8.67□□□□□ -1.02
ZNF440-202ENST00000414255 TLL2Q9Y6L7 1015 aa8.67□□□□□ -1.02
ZNF440-202ENST00000414255 HRCP23327 699 aa8.66□□□□□ -1.02
ZNF440-202ENST00000414255 RIC3Q7Z5B4 369 aa8.66□□□□□ -1.02
ZNF440-202ENST00000414255 SLC16A10Q8TF71 515 aa8.66□□□□□ -1.02
ZNF440-202ENST00000414255 STK17AQ9UEE5 414 aa8.66□□□□□ -1.02
ZNF440-202ENST00000414255 PCDHB15Q9Y5E8 787 aa8.66□□□□□ -1.02
ZNF440-202ENST00000414255 CFAP99D6REC4 459 aa8.65□□□□□ -1.02
ZNF440-202ENST00000414255 BMP1P13497 986 aa8.65□□□□□ -1.02
ZNF440-202ENST00000414255 NNTQ13423 1086 aa8.65□□□□□ -1.02
ZNF440-202ENST00000414255 TUSC1Q2TAM9 212 aa8.65□□□□□ -1.02
ZNF440-202ENST00000414255 TRIM46Q7Z4K8 759 aa8.65□□□□□ -1.02
ZNF440-202ENST00000414255 NPAS3Q8IXF0 933 aa8.65□□□□□ -1.02
ZNF440-202ENST00000414255 F12P00748 615 aaPredicted RBP8.64□□□□□ -1.03
ZNF440-202ENST00000414255 NXF1Q9UBU9 619 aaKnown RBP8.64□□□□□ -1.03
ZNF440-202ENST00000414255 ADH1CP00326 375 aa8.63□□□□□ -1.03
ZNF440-202ENST00000414255 PDE4DQ08499 809 aa8.62□□□□□ -1.03
ZNF440-202ENST00000414255 CDK15Q96Q40 435 aa8.62□□□□□ -1.03
ZNF440-202ENST00000414255 SCARF1Q14162 830 aa8.61□□□□□ -1.03
ZNF440-202ENST00000414255 ARMC2Q8NEN0 867 aa8.61□□□□□ -1.03
ZNF440-202ENST00000414255 MAP10Q9P2G4 905 aa8.61□□□□□ -1.03
ZNF440-202ENST00000414255 WDR4P57081 412 aaKnown RBP8.6□□□□□ -1.03
ZNF440-202ENST00000414255 MYSM1Q5VVJ2 828 aa8.6□□□□□ -1.03
ZNF440-202ENST00000414255 MRPL14Q6P1L8 145 aaKnown RBP8.6□□□□□ -1.03
ZNF440-202ENST00000414255 BPHLQ86WA6 291 aaPredicted RBP8.6□□□□□ -1.03
ZNF440-202ENST00000414255 CABLES1Q8TDN4 633 aa8.6□□□□□ -1.03
ZNF440-202ENST00000414255 NUTM2BA6NNL0 878 aaPredicted RBP8.59□□□□□ -1.03
ZNF440-202ENST00000414255 NUTM2EB1AL46 878 aaPredicted RBP8.59□□□□□ -1.03
ZNF440-202ENST00000414255 TIMP2P16035 220 aa8.59□□□□□ -1.03
ZNF440-202ENST00000414255 AGERQ15109 404 aa8.59□□□□□ -1.03
ZNF440-202ENST00000414255 CSPP1Q1MSJ5 1256 aa8.59□□□□□ -1.03
ZNF440-202ENST00000414255 NUTM2DQ5VT03 806 aaPredicted RBP8.59□□□□□ -1.03
ZNF440-202ENST00000414255 NUTM2AQ8IVF1 878 aaPredicted RBP8.59□□□□□ -1.03
ZNF440-202ENST00000414255 HELBQ8NG08 1087 aaPredicted RBP8.59□□□□□ -1.03
ZNF440-202ENST00000414255 FOXJ1Q92949 421 aa8.59□□□□□ -1.03
ZNF440-202ENST00000414255 IRF7Q92985 503 aa8.59□□□□□ -1.03
ZNF440-202ENST00000414255 ZFP42Q96MM3 310 aa8.59□□□□□ -1.03
ZNF440-202ENST00000414255 BAZ1AQ9NRL2 1556 aaPredicted RBP8.58□□□□□ -1.04
ZNF440-202ENST00000414255 NR5A1Q13285 461 aa8.58□□□□□ -1.04
ZNF440-202ENST00000414255 LCE2CQ5TA81 110 aa8.58□□□□□ -1.04
ZNF440-202ENST00000414255 NBPF14Q5TI25 921 aa8.58□□□□□ -1.04
ZNF440-202ENST00000414255 TSC1Q92574 1164 aa8.58□□□□□ -1.04
ZNF440-202ENST00000414255 LIMD1Q9UGP4 676 aa8.58□□□□□ -1.04
ZNF440-202ENST00000414255 LILRB3O75022 631 aa8.57□□□□□ -1.04
ZNF440-202ENST00000414255 RSPH6AQ9H0K4 717 aa8.57□□□□□ -1.04
ZNF440-202ENST00000414255 FAM181BA6NEQ2 426 aa8.56□□□□□ -1.04
ZNF440-202ENST00000414255 PER1O15534 1290 aaPredicted RBP8.56□□□□□ -1.04
ZNF440-202ENST00000414255 ARID5BQ14865 1188 aa8.56□□□□□ -1.04
ZNF440-202ENST00000414255 KLF16Q9BXK1 252 aaPredicted RBP8.56□□□□□ -1.04
ZNF440-202ENST00000414255 MROH2BQ7Z745 1585 aa8.56□□□□□ -1.04
ZNF440-202ENST00000414255 H3BM21 787 aa8.55□□□□□ -1.04
ZNF440-202ENST00000414255 CLK2P49760 499 aaKnown RBP8.55□□□□□ -1.04
ZNF440-202ENST00000414255 QPCTQ16769 361 aa8.55□□□□□ -1.04
ZNF440-202ENST00000414255 CECR2Q9BXF3 1484 aa8.55□□□□□ -1.04
ZNF440-202ENST00000414255 ZIC2O95409 532 aaPredicted RBP8.54□□□□□ -1.04
ZNF440-202ENST00000414255 GPKOWQ92917 476 aaPredicted RBP eCLIP8.54□□□□□ -1.04
ZNF440-202ENST00000414255 PURBQ96QR8 312 aaKnown RBP8.54□□□□□ -1.04
ZNF440-202ENST00000414255 MAP4K5Q9Y4K4 846 aa8.54□□□□□ -1.04
ZNF440-202ENST00000414255 C4orf48Q5BLP8 95 aa8.53□□□□□ -1.04
ZNF440-202ENST00000414255 SH3RF1Q7Z6J0 888 aa8.53□□□□□ -1.04
ZNF440-202ENST00000414255 C1QTNF2Q9BXJ5 285 aa8.53□□□□□ -1.04
ZNF440-202ENST00000414255 SLC24A3Q9HC58 644 aa8.53□□□□□ -1.04
ZNF440-202ENST00000414255 UPP2O95045 317 aa8.52□□□□□ -1.05
ZNF440-202ENST00000414255 TRMT44Q8IYL2 757 aaKnown RBP8.52□□□□□ -1.05
ZNF440-202ENST00000414255 GMPRP36959 345 aa8.51□□□□□ -1.05
ZNF440-202ENST00000414255 GRM5P41594 1212 aa8.51□□□□□ -1.05
ZNF440-202ENST00000414255 ITPKCQ96DU7 683 aa8.51□□□□□ -1.05
ZNF440-202ENST00000414255 ZFAND3Q9H8U3 227 aa8.51□□□□□ -1.05
ZNF440-202ENST00000414255 NR3C2P08235 984 aa8.5□□□□□ -1.05
ZNF440-202ENST00000414255 SH3BP5LQ7L8J4 393 aa8.5□□□□□ -1.05
ZNF440-202ENST00000414255 MAN1A2O60476 641 aa8.49□□□□□ -1.05
ZNF440-202ENST00000414255 RTL5Q5HYW3 569 aaPredicted RBP8.49□□□□□ -1.05
ZNF440-202ENST00000414255 VASH1Q7L8A9 365 aaPredicted RBP8.49□□□□□ -1.05
ZNF440-202ENST00000414255 MEIOBQ8N635 442 aa8.49□□□□□ -1.05
ZNF440-202ENST00000414255 ZSCAN1Q8NBB4 408 aa8.49□□□□□ -1.05
ZNF440-202ENST00000414255 FSHRP23945 695 aa8.48□□□□□ -1.05
ZNF440-202ENST00000414255 VEGFBP49765 207 aa8.48□□□□□ -1.05
ZNF440-202ENST00000414255 EMILIN1Q9Y6C2 1016 aa8.48□□□□□ -1.05
ZNF440-202ENST00000414255 TOP2AP11388 1531 aaKnown RBP8.48□□□□□ -1.05
ZNF440-202ENST00000414255 EIF4G1Q04637 1599 aaKnown RBP8.48□□□□□ -1.05
ZNF440-202ENST00000414255 SMARCA4P51532 1647 aa8.47□□□□□ -1.05
ZNF440-202ENST00000414255 MAGEB6P1A0A0J9YX57 407 aa8.47□□□□□ -1.05
ZNF440-202ENST00000414255 VSIG8P0DPA2 414 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms