RNA–Protein interactions for RNA: ENST00000413636.6

CIRBP-202, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2 BASIC

Gene CIRBP, Length 1,606 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-202ENST00000413636 PXDNQ92626 1479 aa25.39■■□□□ 1.66
CIRBP-202ENST00000413636 AHDC1Q5TGY3 1603 aaPredicted RBP25.39■■□□□ 1.65
CIRBP-202ENST00000413636 SSH2Q76I76 1423 aa25.39■■□□□ 1.65
CIRBP-202ENST00000413636 TRPM3Q9HCF6 1732 aaPredicted RBP25.38■■□□□ 1.65
CIRBP-202ENST00000413636 PER1O15534 1290 aaPredicted RBP25.37■■□□□ 1.65
CIRBP-202ENST00000413636 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.37■■□□□ 1.65
CIRBP-202ENST00000413636 TTC21BQ7Z4L5 1316 aa25.37■■□□□ 1.65
CIRBP-202ENST00000413636 KNSTRNQ9Y448 316 aa25.37■■□□□ 1.65
CIRBP-202ENST00000413636 SOS2Q07890 1332 aaPredicted RBP25.36■■□□□ 1.65
CIRBP-202ENST00000413636 PHLPP1O60346 1717 aa25.36■■□□□ 1.65
CIRBP-202ENST00000413636 PAK3O75914 559 aaPredicted RBP25.36■■□□□ 1.65
CIRBP-202ENST00000413636 BRD4O60885 1362 aaPredicted RBP25.36■■□□□ 1.65
CIRBP-202ENST00000413636 SBNO1A3KN83 1393 aa25.33■■□□□ 1.64
CIRBP-202ENST00000413636 KIF20BQ96Q89 1820 aa25.32■■□□□ 1.64
CIRBP-202ENST00000413636 TTC21AQ8NDW8 1320 aa25.32■■□□□ 1.64
CIRBP-202ENST00000413636 CGNL1Q0VF96 1302 aa25.32■■□□□ 1.64
CIRBP-202ENST00000413636 PIK3C2AO00443 1686 aa25.31■■□□□ 1.64
CIRBP-202ENST00000413636 ALS2Q96Q42 1657 aa25.31■■□□□ 1.64
CIRBP-202ENST00000413636 NME9Q86XW9 330 aa25.3■■□□□ 1.64
CIRBP-202ENST00000413636 COL16A1Q07092 1604 aaPredicted RBP25.3■■□□□ 1.64
CIRBP-202ENST00000413636 LMOD2Q6P5Q4 547 aa25.3■■□□□ 1.64
CIRBP-202ENST00000413636 TNS3Q68CZ2 1445 aa25.29■■□□□ 1.64
CIRBP-202ENST00000413636 SPATA31A3Q5VYP0 1347 aa25.29■■□□□ 1.64
CIRBP-202ENST00000413636 FYB1O15117 783 aa25.29■■□□□ 1.64
CIRBP-202ENST00000413636 AMER1Q5JTC6 1135 aaPredicted RBP25.29■■□□□ 1.64
CIRBP-202ENST00000413636 ABTB2Q8N961 1025 aa25.29■■□□□ 1.64
CIRBP-202ENST00000413636 YTHDC1Q96MU7 727 aaKnown RBP25.29■■□□□ 1.64
CIRBP-202ENST00000413636 CNGB1Q14028 1251 aaPredicted RBP25.28■■□□□ 1.64
CIRBP-202ENST00000413636 NUTM2GQ5VZR2 741 aa25.27■■□□□ 1.64
CIRBP-202ENST00000413636 ZRANB1Q9UGI0 708 aa25.27■■□□□ 1.64
CIRBP-202ENST00000413636 GGNBP2Q9H3C7 697 aa25.26■■□□□ 1.63
CIRBP-202ENST00000413636 CC2D1BQ5T0F9 858 aaKnown RBP25.26■■□□□ 1.63
CIRBP-202ENST00000413636 LRRC59Q96AG4 307 aaKnown RBP25.26■■□□□ 1.63
CIRBP-202ENST00000413636 PRKRIP1Q9H875 184 aaPredicted RBP25.25■■□□□ 1.63
CIRBP-202ENST00000413636 ANKRD26Q9UPS8 1709 aa25.24■■□□□ 1.63
CIRBP-202ENST00000413636 HSPA1LP34931 641 aa25.23■■□□□ 1.63
CIRBP-202ENST00000413636 NLRP6P59044 892 aa25.23■■□□□ 1.63
CIRBP-202ENST00000413636 ARHGEF10O15013 1369 aa25.23■■□□□ 1.63
CIRBP-202ENST00000413636 NSD2O96028 1365 aa25.23■■□□□ 1.63
CIRBP-202ENST00000413636 NPC1L1Q9UHC9 1359 aa25.23■■□□□ 1.63
CIRBP-202ENST00000413636 MARF1Q9Y4F3 1742 aaKnown RBP25.23■■□□□ 1.63
CIRBP-202ENST00000413636 FBXO41Q8TF61 875 aa25.23■■□□□ 1.63
CIRBP-202ENST00000413636 USP31Q70CQ4 1352 aa25.22■■□□□ 1.63
CIRBP-202ENST00000413636 OVOS2A0A0J9YW53 1432 aa25.21■■□□□ 1.63
CIRBP-202ENST00000413636 OVOS2Q6IE36 1432 aa25.21■■□□□ 1.63
CIRBP-202ENST00000413636 USP54Q70EL1 1684 aa25.21■■□□□ 1.63
CIRBP-202ENST00000413636 COG3Q96JB2 828 aa25.21■■□□□ 1.63
CIRBP-202ENST00000413636 PLEKHG5O94827 1062 aa25.2■■□□□ 1.62
CIRBP-202ENST00000413636 NLRP13Q86W25 1043 aa25.2■■□□□ 1.62
CIRBP-202ENST00000413636 PNPLA6Q8IY17 1366 aa25.17■■□□□ 1.62
CIRBP-202ENST00000413636 MORC1Q86VD1 984 aa25.17■■□□□ 1.62
CIRBP-202ENST00000413636 MED1Q15648 1581 aaPredicted RBP25.17■■□□□ 1.62
CIRBP-202ENST00000413636 CRYBG1Q9Y4K1 1723 aa25.15■■□□□ 1.62
CIRBP-202ENST00000413636 USP19O94966 1318 aa25.15■■□□□ 1.62
CIRBP-202ENST00000413636 COL22A1Q8NFW1 1626 aaPredicted RBP25.15■■□□□ 1.62
CIRBP-202ENST00000413636 CABLES1Q8TDN4 633 aa25.15■■□□□ 1.62
CIRBP-202ENST00000413636 SHPRHQ149N8 1683 aa25.14■■□□□ 1.61
CIRBP-202ENST00000413636 PHRF1Q9P1Y6 1649 aaKnown RBP25.14■■□□□ 1.61
CIRBP-202ENST00000413636 SOX12O15370 315 aa25.13■■□□□ 1.61
CIRBP-202ENST00000413636 TNNT2P45379 298 aaPredicted RBP25.13■■□□□ 1.61
CIRBP-202ENST00000413636 SLIT3O75094 1523 aa25.13■■□□□ 1.61
CIRBP-202ENST00000413636 ABCA3Q99758 1704 aa25.12■■□□□ 1.61
CIRBP-202ENST00000413636 JCADQ9P266 1359 aa25.12■■□□□ 1.61
CIRBP-202ENST00000413636 PARD3Q8TEW0 1356 aa25.12■■□□□ 1.61
CIRBP-202ENST00000413636 GCP02774 474 aa25.1■■□□□ 1.61
CIRBP-202ENST00000413636 FBLN1P23142 703 aa25.1■■□□□ 1.61
CIRBP-202ENST00000413636 RALBP1Q15311 655 aa25.09■■□□□ 1.61
CIRBP-202ENST00000413636 KCNH5Q8NCM2 988 aa25.08■■□□□ 1.61
CIRBP-202ENST00000413636 HAP1P54257 671 aaPredicted RBP25.08■■□□□ 1.6
CIRBP-202ENST00000413636 NFAT5O94916 1531 aa25.07■■□□□ 1.6
CIRBP-202ENST00000413636 MAP2P11137 1827 aaKnown RBP25.07■■□□□ 1.6
CIRBP-202ENST00000413636 AATKQ6ZMQ8 1374 aa25.04■■□□□ 1.6
CIRBP-202ENST00000413636 ZC3H6P61129 1189 aaKnown RBP25.04■■□□□ 1.6
CIRBP-202ENST00000413636 RRS1Q15050 365 aaKnown RBP25.04■■□□□ 1.6
CIRBP-202ENST00000413636 LTN1O94822 1766 aa25.03■■□□□ 1.6
CIRBP-202ENST00000413636 NUTM2BA6NNL0 878 aaPredicted RBP25.03■■□□□ 1.6
CIRBP-202ENST00000413636 NUTM2EB1AL46 878 aaPredicted RBP25.03■■□□□ 1.6
CIRBP-202ENST00000413636 PPP2R1AP30153 589 aa25.03■■□□□ 1.6
CIRBP-202ENST00000413636 NUTM2AQ8IVF1 878 aaPredicted RBP25.03■■□□□ 1.6
CIRBP-202ENST00000413636 SPATA31A6Q5VVP1 1343 aa25.01■■□□□ 1.59
CIRBP-202ENST00000413636 MYBBP1AQ9BQG0 1328 aaKnown RBP25.01■■□□□ 1.59
CIRBP-202ENST00000413636 ZBTB7CA1YPR0 619 aa25.01■■□□□ 1.59
CIRBP-202ENST00000413636 MRS2Q9HD23 443 aa25.01■■□□□ 1.59
CIRBP-202ENST00000413636 POLKQ9UBT6 870 aa25.01■■□□□ 1.59
CIRBP-202ENST00000413636 EMILIN1Q9Y6C2 1016 aa25.01■■□□□ 1.59
CIRBP-202ENST00000413636 MAP3K19Q56UN5 1328 aa25■■□□□ 1.59
CIRBP-202ENST00000413636 KIAA0232Q92628 1395 aa24.99■■□□□ 1.59
CIRBP-202ENST00000413636 ARHGEF25Q86VW2 580 aa24.99■■□□□ 1.59
CIRBP-202ENST00000413636 PPM1GO15355 546 aaPredicted RBP24.97■■□□□ 1.59
CIRBP-202ENST00000413636 MTHFSP49914 203 aa24.97■■□□□ 1.59
CIRBP-202ENST00000413636 PEAK1Q9H792 1746 aa24.97■■□□□ 1.59
CIRBP-202ENST00000413636 CPDO75976 1380 aa24.97■■□□□ 1.59
CIRBP-202ENST00000413636 ADAMTS2O95450 1211 aa24.97■■□□□ 1.59
CIRBP-202ENST00000413636 SMG6Q86US8 1419 aaKnown RBP24.96■■□□□ 1.59
CIRBP-202ENST00000413636 LRP6O75581 1613 aa24.95■■□□□ 1.58
CIRBP-202ENST00000413636 AMPHP49418 695 aa24.95■■□□□ 1.58
CIRBP-202ENST00000413636 PRDM11Q9NQV5 511 aa24.95■■□□□ 1.58
CIRBP-202ENST00000413636 CHRNA2Q15822 529 aa24.94■■□□□ 1.58
CIRBP-202ENST00000413636 COL18A1P39060 1754 aa24.93■■□□□ 1.58
CIRBP-202ENST00000413636 FAM83GA6ND36 823 aa24.92■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms