RNA–Protein interactions for RNA: ENST00000413517.1

HERPUD2-203, Transcript of HERPUD family member 2, humanhuman

TSL 5

Gene HERPUD2, Length 808 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-203ENST00000413517 PMFBP1Q8TBY8 1022 aa12.3□□□□□ -0.44
HERPUD2-203ENST00000413517 SPATA31A3Q5VYP0 1347 aa12.3□□□□□ -0.44
HERPUD2-203ENST00000413517 TNS3Q68CZ2 1445 aa12.29□□□□□ -0.44
HERPUD2-203ENST00000413517 MKRN4PQ13434 485 aaPredicted RBP12.29□□□□□ -0.44
HERPUD2-203ENST00000413517 KRT28Q7Z3Y7 464 aa12.29□□□□□ -0.44
HERPUD2-203ENST00000413517 AFF2P51816 1311 aa12.29□□□□□ -0.44
HERPUD2-203ENST00000413517 GPRASP1Q5JY77 1395 aa12.29□□□□□ -0.44
HERPUD2-203ENST00000413517 ADAMTS2O95450 1211 aa12.28□□□□□ -0.44
HERPUD2-203ENST00000413517 CENPJQ9HC77 1338 aaPredicted RBP12.28□□□□□ -0.44
HERPUD2-203ENST00000413517 EIF3AQ14152 1382 aaKnown RBP12.28□□□□□ -0.44
HERPUD2-203ENST00000413517 RALGAPBQ86X10 1494 aa12.27□□□□□ -0.44
HERPUD2-203ENST00000413517 PLCH1Q4KWH8 1693 aa12.27□□□□□ -0.45
HERPUD2-203ENST00000413517 CDK19Q9BWU1 502 aa12.27□□□□□ -0.45
HERPUD2-203ENST00000413517 SBNO1A3KN83 1393 aa12.27□□□□□ -0.45
HERPUD2-203ENST00000413517 ROCK2O75116 1388 aaKnown RBP12.27□□□□□ -0.45
HERPUD2-203ENST00000413517 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.26□□□□□ -0.45
HERPUD2-203ENST00000413517 NUDT16Q96DE0 195 aaKnown RBP12.26□□□□□ -0.45
HERPUD2-203ENST00000413517 CFAP44Q96MT7 982 aa12.26□□□□□ -0.45
HERPUD2-203ENST00000413517 C8orf37Q96NL8 207 aa12.26□□□□□ -0.45
HERPUD2-203ENST00000413517 TONSLQ96HA7 1378 aa12.26□□□□□ -0.45
HERPUD2-203ENST00000413517 CABLES1Q8TDN4 633 aa12.24□□□□□ -0.45
HERPUD2-203ENST00000413517 PCGF6Q9BYE7 350 aa12.24□□□□□ -0.45
HERPUD2-203ENST00000413517 PHRF1Q9P1Y6 1649 aaKnown RBP12.24□□□□□ -0.45
HERPUD2-203ENST00000413517 AKAP12Q02952 1782 aa12.23□□□□□ -0.45
HERPUD2-203ENST00000413517 POLR3AO14802 1390 aaPredicted RBP12.23□□□□□ -0.45
HERPUD2-203ENST00000413517 PSME1Q06323 249 aa12.23□□□□□ -0.45
HERPUD2-203ENST00000413517 ZNF772Q68DY9 489 aaPredicted RBP12.23□□□□□ -0.45
HERPUD2-203ENST00000413517 NRAPQ86VF7 1730 aa12.23□□□□□ -0.45
HERPUD2-203ENST00000413517 BCL9LQ86UU0 1499 aa12.22□□□□□ -0.45
HERPUD2-203ENST00000413517 CABP2Q9NPB3 220 aa12.22□□□□□ -0.45
HERPUD2-203ENST00000413517 NWD2Q9ULI1 1742 aa12.22□□□□□ -0.45
HERPUD2-203ENST00000413517 SLIT2O94813 1529 aa12.21□□□□□ -0.45
HERPUD2-203ENST00000413517 ATRNO75882 1429 aa12.21□□□□□ -0.45
HERPUD2-203ENST00000413517 PPIP5K1Q6PFW1 1433 aa12.21□□□□□ -0.45
HERPUD2-203ENST00000413517 ARHGEF10O15013 1369 aa12.21□□□□□ -0.45
HERPUD2-203ENST00000413517 ACEP12821 1306 aa12.21□□□□□ -0.45
HERPUD2-203ENST00000413517 PLEKHG5O94827 1062 aa12.21□□□□□ -0.45
HERPUD2-203ENST00000413517 FNBP4Q8N3X1 1017 aaPredicted RBP12.21□□□□□ -0.45
HERPUD2-203ENST00000413517 NGDNQ8NEJ9 315 aaKnown RBP12.21□□□□□ -0.45
HERPUD2-203ENST00000413517 NGLY1Q96IV0 654 aa12.21□□□□□ -0.45
HERPUD2-203ENST00000413517 RGS12O14924 1447 aa12.2□□□□□ -0.46
HERPUD2-203ENST00000413517 PLEKHG3A1L390 1219 aa12.2□□□□□ -0.46
HERPUD2-203ENST00000413517 ECM2O94769 699 aaPredicted RBP12.2□□□□□ -0.46
HERPUD2-203ENST00000413517 LMOD2Q6P5Q4 547 aa12.2□□□□□ -0.46
HERPUD2-203ENST00000413517 CCDC61Q9Y6R9 512 aa12.2□□□□□ -0.46
HERPUD2-203ENST00000413517 GLI3P10071 1580 aa12.2□□□□□ -0.46
HERPUD2-203ENST00000413517 NRKQ7Z2Y5 1582 aa12.2□□□□□ -0.46
HERPUD2-203ENST00000413517 CDK12Q9NYV4 1490 aaPredicted RBP12.2□□□□□ -0.46
HERPUD2-203ENST00000413517 SBNO2Q9Y2G9 1366 aa12.19□□□□□ -0.46
HERPUD2-203ENST00000413517 SRPK2P78362 688 aaKnown RBP12.19□□□□□ -0.46
HERPUD2-203ENST00000413517 CARD11Q9BXL7 1154 aa12.19□□□□□ -0.46
HERPUD2-203ENST00000413517 QTRT2Q9H974 415 aaKnown RBP12.19□□□□□ -0.46
HERPUD2-203ENST00000413517 USP21Q9UK80 565 aa12.19□□□□□ -0.46
HERPUD2-203ENST00000413517 MON2Q7Z3U7 1717 aa12.19□□□□□ -0.46
HERPUD2-203ENST00000413517 BRWD3Q6RI45 1802 aa12.18□□□□□ -0.46
HERPUD2-203ENST00000413517 COL14A1Q05707 1796 aaKnown RBP12.18□□□□□ -0.46
HERPUD2-203ENST00000413517 PIK3C2AO00443 1686 aa12.18□□□□□ -0.46
HERPUD2-203ENST00000413517 RXRBP28702 533 aa12.17□□□□□ -0.46
HERPUD2-203ENST00000413517 RNF39Q9H2S5 420 aa12.17□□□□□ -0.46
HERPUD2-203ENST00000413517 EVC2Q86UK5 1308 aa12.16□□□□□ -0.46
HERPUD2-203ENST00000413517 PAK3O75914 559 aaPredicted RBP12.16□□□□□ -0.46
HERPUD2-203ENST00000413517 SPOCK2Q92563 424 aa12.16□□□□□ -0.46
HERPUD2-203ENST00000413517 CABP1Q9NZU7 370 aa12.16□□□□□ -0.46
HERPUD2-203ENST00000413517 USP6P35125 1406 aa12.16□□□□□ -0.46
HERPUD2-203ENST00000413517 SSH2Q76I76 1423 aa12.16□□□□□ -0.46
HERPUD2-203ENST00000413517 RBM6P78332 1123 aaKnown RBP12.15□□□□□ -0.46
HERPUD2-203ENST00000413517 NUTM2GQ5VZR2 741 aa12.15□□□□□ -0.46
HERPUD2-203ENST00000413517 SPRYD3Q8NCJ5 442 aa12.15□□□□□ -0.46
HERPUD2-203ENST00000413517 CD163L1Q9NR16 1453 aa12.14□□□□□ -0.47
HERPUD2-203ENST00000413517 LMO7Q8WWI1 1683 aa12.14□□□□□ -0.47
HERPUD2-203ENST00000413517 FAM83GA6ND36 823 aa12.14□□□□□ -0.47
HERPUD2-203ENST00000413517 CACNB1Q02641 598 aaPredicted RBP12.14□□□□□ -0.47
HERPUD2-203ENST00000413517 TRPC5Q9UL62 973 aaPredicted RBP12.14□□□□□ -0.47
HERPUD2-203ENST00000413517 CLSPNQ9HAW4 1339 aa12.13□□□□□ -0.47
HERPUD2-203ENST00000413517 CPSF1Q10570 1443 aaKnown RBP12.13□□□□□ -0.47
HERPUD2-203ENST00000413517 TESK2Q96S53 571 aa12.13□□□□□ -0.47
HERPUD2-203ENST00000413517 USP19O94966 1318 aa12.12□□□□□ -0.47
HERPUD2-203ENST00000413517 SLIT3O75094 1523 aa12.12□□□□□ -0.47
HERPUD2-203ENST00000413517 UNC5CLQ8IV45 518 aa12.12□□□□□ -0.47
HERPUD2-203ENST00000413517 KLHL34Q8N239 644 aa12.12□□□□□ -0.47
HERPUD2-203ENST00000413517 EP400Q96L91 3159 aa12.12□□□□□ -0.47
HERPUD2-203ENST00000413517 USP54Q70EL1 1684 aa12.12□□□□□ -0.47
HERPUD2-203ENST00000413517 COL18A1P39060 1754 aa12.12□□□□□ -0.47
HERPUD2-203ENST00000413517 RGPD5Q99666 1765 aa12.12□□□□□ -0.47
HERPUD2-203ENST00000413517 ATAD2Q6PL18 1390 aa12.11□□□□□ -0.47
HERPUD2-203ENST00000413517 KIAA0232Q92628 1395 aa12.11□□□□□ -0.47
HERPUD2-203ENST00000413517 ST20-MTHFSA0A0A6YYL1 179 aa12.11□□□□□ -0.47
HERPUD2-203ENST00000413517 GJD4Q96KN9 370 aaPredicted RBP12.11□□□□□ -0.47
HERPUD2-203ENST00000413517 TSHZ2Q9NRE2 1034 aa12.11□□□□□ -0.47
HERPUD2-203ENST00000413517 TIMELESSQ9UNS1 1208 aa12.11□□□□□ -0.47
HERPUD2-203ENST00000413517 BRD4O60885 1362 aaPredicted RBP12.1□□□□□ -0.47
HERPUD2-203ENST00000413517 USP47Q96K76 1375 aa12.1□□□□□ -0.47
HERPUD2-203ENST00000413517 ABTB2Q8N961 1025 aa12.1□□□□□ -0.47
HERPUD2-203ENST00000413517 CAMTA1Q9Y6Y1 1673 aa12.1□□□□□ -0.47
HERPUD2-203ENST00000413517 CHRNA2Q15822 529 aa12.09□□□□□ -0.47
HERPUD2-203ENST00000413517 BTG4Q9NY30 223 aa12.09□□□□□ -0.47
HERPUD2-203ENST00000413517 MYOM1P52179 1685 aa12.09□□□□□ -0.47
HERPUD2-203ENST00000413517 THSD7AQ9UPZ6 1657 aa12.08□□□□□ -0.48
HERPUD2-203ENST00000413517 ZC3H6P61129 1189 aaKnown RBP12.08□□□□□ -0.48
HERPUD2-203ENST00000413517 NBR1Q14596 966 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms