RNA–Protein interactions for RNA: ENST00000413364.6

LITAF-203, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 2 BASIC

Gene LITAF, Length 2,292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-203ENST00000413364 SPINK5Q9NQ38 1064 aaPredicted RBP16.9■□□□□ 0.3
LITAF-203ENST00000413364 KIF20BQ96Q89 1820 aa16.89■□□□□ 0.3
LITAF-203ENST00000413364 NKTRP30414 1462 aaKnown RBP16.89■□□□□ 0.29
LITAF-203ENST00000413364 PLIN1O60240 522 aa16.89■□□□□ 0.29
LITAF-203ENST00000413364 ANP32AP39687 249 aaKnown RBP16.89■□□□□ 0.29
LITAF-203ENST00000413364 WWC1Q8IX03 1113 aa16.89■□□□□ 0.29
LITAF-203ENST00000413364 ZBTB47Q9UFB7 747 aaPredicted RBP16.89■□□□□ 0.29
LITAF-203ENST00000413364 COL3A1P02461 1466 aaPredicted RBP16.89■□□□□ 0.29
LITAF-203ENST00000413364 LTKP29376 864 aa16.89■□□□□ 0.29
LITAF-203ENST00000413364 FER1L4A9Z1Z3 1794 aa16.88■□□□□ 0.29
LITAF-203ENST00000413364 TCP11L2Q8N4U5 519 aa16.88■□□□□ 0.29
LITAF-203ENST00000413364 CPSF1Q10570 1443 aaKnown RBP16.88■□□□□ 0.29
LITAF-203ENST00000413364 NCBP3Q53F19 620 aaKnown RBP16.87■□□□□ 0.29
LITAF-203ENST00000413364 PPIP5K1Q6PFW1 1433 aa16.87■□□□□ 0.29
LITAF-203ENST00000413364 PHF23Q9BUL5 403 aaPredicted RBP16.87■□□□□ 0.29
LITAF-203ENST00000413364 DMRT2Q9Y5R5 561 aa16.87■□□□□ 0.29
LITAF-203ENST00000413364 ARHGAP23Q9P227 1491 aa16.87■□□□□ 0.29
LITAF-203ENST00000413364 SLIT1O75093 1534 aa16.87■□□□□ 0.29
LITAF-203ENST00000413364 U2AF1L5P0DN76 240 aaPredicted RBP16.86■□□□□ 0.29
LITAF-203ENST00000413364 U2AF1Q01081 240 aaKnown RBP eCLIP16.86■□□□□ 0.29
LITAF-203ENST00000413364 ROBO2Q9HCK4 1378 aa16.86■□□□□ 0.29
LITAF-203ENST00000413364 EID1Q9Y6B2 187 aa16.86■□□□□ 0.29
LITAF-203ENST00000413364 EDC4Q6P2E9 1401 aaKnown RBP16.85■□□□□ 0.29
LITAF-203ENST00000413364 CCDC27Q2M243 656 aa16.85■□□□□ 0.29
LITAF-203ENST00000413364 NUDT16Q96DE0 195 aaKnown RBP16.85■□□□□ 0.29
LITAF-203ENST00000413364 CDC42BPGQ6DT37 1551 aa16.85■□□□□ 0.29
LITAF-203ENST00000413364 PNPLA6Q8IY17 1366 aa16.84■□□□□ 0.29
LITAF-203ENST00000413364 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.84■□□□□ 0.29
LITAF-203ENST00000413364 CRBNQ96SW2 442 aa16.84■□□□□ 0.29
LITAF-203ENST00000413364 ADGRB2O60241 1585 aa16.84■□□□□ 0.29
LITAF-203ENST00000413364 WDR63Q8IWG1 891 aa16.84■□□□□ 0.29
LITAF-203ENST00000413364 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.84■□□□□ 0.29
LITAF-203ENST00000413364 RRP7AQ9Y3A4 280 aaKnown RBP16.84■□□□□ 0.29
LITAF-203ENST00000413364 CCDC61Q9Y6R9 512 aa16.84■□□□□ 0.29
LITAF-203ENST00000413364 NEUROD2Q15784 382 aa16.82■□□□□ 0.28
LITAF-203ENST00000413364 C20orf194Q5TEA3 1177 aa16.82■□□□□ 0.28
LITAF-203ENST00000413364 FAM43AQ8N2R8 423 aa16.81■□□□□ 0.28
LITAF-203ENST00000413364 THEMISQ8N1K5 641 aaPredicted RBP16.81■□□□□ 0.28
LITAF-203ENST00000413364 PTPRUQ92729 1446 aa16.8■□□□□ 0.28
LITAF-203ENST00000413364 U2SURPO15042 1029 aaKnown RBP16.8■□□□□ 0.28
LITAF-203ENST00000413364 DIAPH1O60610 1272 aaKnown RBP16.8■□□□□ 0.28
LITAF-203ENST00000413364 PLEKHF1Q96S99 279 aa16.8■□□□□ 0.28
LITAF-203ENST00000413364 MON2Q7Z3U7 1717 aa16.8■□□□□ 0.28
LITAF-203ENST00000413364 PRR36Q9H6K5 1346 aa16.8■□□□□ 0.28
LITAF-203ENST00000413364 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.8■□□□□ 0.28
LITAF-203ENST00000413364 SLC26A8Q96RN1 970 aa16.8■□□□□ 0.28
LITAF-203ENST00000413364 TBX22Q9Y458 520 aa16.8■□□□□ 0.28
LITAF-203ENST00000413364 PLPPR3Q6T4P5 718 aa16.79■□□□□ 0.28
LITAF-203ENST00000413364 AKAP12Q02952 1782 aa16.78■□□□□ 0.28
LITAF-203ENST00000413364 NCKAP5LQ9HCH0 1330 aa16.78■□□□□ 0.28
LITAF-203ENST00000413364 NEFMP07197 916 aa16.78■□□□□ 0.28
LITAF-203ENST00000413364 ZNF692Q9BU19 519 aaPredicted RBP16.78■□□□□ 0.28
LITAF-203ENST00000413364 POLKQ9UBT6 870 aa16.78■□□□□ 0.28
LITAF-203ENST00000413364 DIP2AQ14689 1571 aa16.78■□□□□ 0.28
LITAF-203ENST00000413364 NME9Q86XW9 330 aa16.77■□□□□ 0.28
LITAF-203ENST00000413364 ITSN1Q15811 1721 aa16.77■□□□□ 0.28
LITAF-203ENST00000413364 FGD1P98174 961 aa16.77■□□□□ 0.27
LITAF-203ENST00000413364 BRPF3Q9ULD4 1205 aa16.77■□□□□ 0.27
LITAF-203ENST00000413364 PNNQ9H307 717 aaKnown RBP16.76■□□□□ 0.27
LITAF-203ENST00000413364 AATKQ6ZMQ8 1374 aa16.76■□□□□ 0.27
LITAF-203ENST00000413364 BCAR3O75815 825 aa16.76■□□□□ 0.27
LITAF-203ENST00000413364 MAPK8IP3Q9UPT6 1336 aa16.76■□□□□ 0.27
LITAF-203ENST00000413364 PTCH1Q13635 1447 aa16.75■□□□□ 0.27
LITAF-203ENST00000413364 TOPAZ1Q8N9V7 1692 aa16.75■□□□□ 0.27
LITAF-203ENST00000413364 PDE4CQ08493 712 aa16.75■□□□□ 0.27
LITAF-203ENST00000413364 AMOTL2Q9Y2J4 779 aa16.75■□□□□ 0.27
LITAF-203ENST00000413364 TMPOP42166 694 aaKnown RBP16.75■□□□□ 0.27
LITAF-203ENST00000413364 MYH16Q9H6N6 1097 aa16.75■□□□□ 0.27
LITAF-203ENST00000413364 PLEKHG3A1L390 1219 aa16.74■□□□□ 0.27
LITAF-203ENST00000413364 PPM1GO15355 546 aaPredicted RBP16.74■□□□□ 0.27
LITAF-203ENST00000413364 COG3Q96JB2 828 aa16.73■□□□□ 0.27
LITAF-203ENST00000413364 ZRANB1Q9UGI0 708 aa16.73■□□□□ 0.27
LITAF-203ENST00000413364 CDK12Q9NYV4 1490 aaPredicted RBP16.73■□□□□ 0.27
LITAF-203ENST00000413364 RRP9O43818 475 aaKnown RBP16.73■□□□□ 0.27
LITAF-203ENST00000413364 FCHSD2O94868 740 aa16.73■□□□□ 0.27
LITAF-203ENST00000413364 FBLN1P23142 703 aa16.73■□□□□ 0.27
LITAF-203ENST00000413364 CEP170BQ9Y4F5 1589 aaPredicted RBP16.72■□□□□ 0.27
LITAF-203ENST00000413364 MAP2P11137 1827 aaKnown RBP16.72■□□□□ 0.27
LITAF-203ENST00000413364 GSE1Q14687 1217 aa16.71■□□□□ 0.27
LITAF-203ENST00000413364 TRIM35Q9UPQ4 493 aa16.71■□□□□ 0.27
LITAF-203ENST00000413364 EMILIN1Q9Y6C2 1016 aa16.71■□□□□ 0.27
LITAF-203ENST00000413364 NRKQ7Z2Y5 1582 aa16.71■□□□□ 0.27
LITAF-203ENST00000413364 RARSP54136 660 aaKnown RBP16.71■□□□□ 0.27
LITAF-203ENST00000413364 AAMPQ13685 434 aa16.71■□□□□ 0.27
LITAF-203ENST00000413364 PDE3AQ14432 1141 aa16.71■□□□□ 0.27
LITAF-203ENST00000413364 ACEP12821 1306 aa16.7■□□□□ 0.26
LITAF-203ENST00000413364 IL16Q14005 1332 aa16.7■□□□□ 0.26
LITAF-203ENST00000413364 RIMS1Q86UR5 1692 aaKnown RBP16.7■□□□□ 0.26
LITAF-203ENST00000413364 LRRC7Q96NW7 1537 aa16.7■□□□□ 0.26
LITAF-203ENST00000413364 XRN1Q8IZH2 1706 aaKnown RBP16.7■□□□□ 0.26
LITAF-203ENST00000413364 TTC21BQ7Z4L5 1316 aa16.7■□□□□ 0.26
LITAF-203ENST00000413364 TCERG1O14776 1098 aaKnown RBP16.69■□□□□ 0.26
LITAF-203ENST00000413364 USP6P35125 1406 aa16.69■□□□□ 0.26
LITAF-203ENST00000413364 KDM2BQ8NHM5 1336 aa16.69■□□□□ 0.26
LITAF-203ENST00000413364 IL13P35225 146 aa16.68■□□□□ 0.26
LITAF-203ENST00000413364 PIK3R4Q99570 1358 aa16.68■□□□□ 0.26
LITAF-203ENST00000413364 RIPK4P57078 832 aa16.68■□□□□ 0.26
LITAF-203ENST00000413364 PRKAR2BP31323 418 aa16.67■□□□□ 0.26
LITAF-203ENST00000413364 RBM10P98175 930 aaKnown RBP16.67■□□□□ 0.26
LITAF-203ENST00000413364 HSP90AA2PQ14568 343 aaPredicted RBP16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms