RNA–Protein interactions for RNA: ENST00000413164.6

SLC13A3-204, Transcript of solute carrier family 13 member 3, humanhuman

TSL 2 BASIC

Gene SLC13A3, Length 2,008 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC13A3-204ENST00000413164 CPSF1Q10570 1443 aaKnown RBP27.29■■□□□ 1.96
SLC13A3-204ENST00000413164 PNPLA6Q8IY17 1366 aa27.28■■□□□ 1.96
SLC13A3-204ENST00000413164 ADAMTS13Q76LX8 1427 aa27.28■■□□□ 1.96
SLC13A3-204ENST00000413164 U2AF1L5P0DN76 240 aaPredicted RBP27.28■■□□□ 1.96
SLC13A3-204ENST00000413164 U2AF1Q01081 240 aaKnown RBP eCLIP27.28■■□□□ 1.96
SLC13A3-204ENST00000413164 WDR63Q8IWG1 891 aa27.28■■□□□ 1.96
SLC13A3-204ENST00000413164 RRP7AQ9Y3A4 280 aaKnown RBP27.27■■□□□ 1.96
SLC13A3-204ENST00000413164 SLC26A8Q96RN1 970 aa27.26■■□□□ 1.95
SLC13A3-204ENST00000413164 NEUROD2Q15784 382 aa27.24■■□□□ 1.95
SLC13A3-204ENST00000413164 PPIP5K1Q6PFW1 1433 aa27.23■■□□□ 1.95
SLC13A3-204ENST00000413164 PLEKHF1Q96S99 279 aa27.23■■□□□ 1.95
SLC13A3-204ENST00000413164 EDC4Q6P2E9 1401 aaKnown RBP27.22■■□□□ 1.95
SLC13A3-204ENST00000413164 BCAR3O75815 825 aa27.22■■□□□ 1.95
SLC13A3-204ENST00000413164 CDC42BPGQ6DT37 1551 aa27.21■■□□□ 1.95
SLC13A3-204ENST00000413164 HSPA2P54652 639 aa27.21■■□□□ 1.95
SLC13A3-204ENST00000413164 NCKAP5LQ9HCH0 1330 aa27.2■■□□□ 1.94
SLC13A3-204ENST00000413164 ROBO2Q9HCK4 1378 aa27.19■■□□□ 1.94
SLC13A3-204ENST00000413164 MON2Q7Z3U7 1717 aa27.19■■□□□ 1.94
SLC13A3-204ENST00000413164 NUDT16Q96DE0 195 aaKnown RBP27.18■■□□□ 1.94
SLC13A3-204ENST00000413164 TBX22Q9Y458 520 aa27.18■■□□□ 1.94
SLC13A3-204ENST00000413164 TCERG1O14776 1098 aaKnown RBP27.17■■□□□ 1.94
SLC13A3-204ENST00000413164 SUGP2Q8IX01 1082 aaKnown RBP eCLIP27.17■■□□□ 1.943e-7■■□□□ 14.3
SLC13A3-204ENST00000413164 KDM2BQ8NHM5 1336 aa27.17■■□□□ 1.94
SLC13A3-204ENST00000413164 CCDC61Q9Y6R9 512 aa27.17■■□□□ 1.94
SLC13A3-204ENST00000413164 LMTK3Q96Q04 1460 aa27.16■■□□□ 1.94
SLC13A3-204ENST00000413164 MSH5O43196 834 aa27.16■■□□□ 1.94
SLC13A3-204ENST00000413164 U2SURPO15042 1029 aaKnown RBP27.16■■□□□ 1.94
SLC13A3-204ENST00000413164 DIAPH1O60610 1272 aaKnown RBP27.16■■□□□ 1.94
SLC13A3-204ENST00000413164 AKAP12Q02952 1782 aa27.15■■□□□ 1.94
SLC13A3-204ENST00000413164 POLKQ9UBT6 870 aa27.14■■□□□ 1.94
SLC13A3-204ENST00000413164 NPHP4O75161 1426 aaPredicted RBP27.14■■□□□ 1.94
SLC13A3-204ENST00000413164 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.13■■□□□ 1.93
SLC13A3-204ENST00000413164 DIP2AQ14689 1571 aa27.13■■□□□ 1.93
SLC13A3-204ENST00000413164 PDE3AQ14432 1141 aa27.12■■□□□ 1.93
SLC13A3-204ENST00000413164 MAP2P11137 1827 aaKnown RBP27.12■■□□□ 1.93
SLC13A3-204ENST00000413164 PRR36Q9H6K5 1346 aa27.12■■□□□ 1.93
SLC13A3-204ENST00000413164 TMPOP42166 694 aaKnown RBP27.12■■□□□ 1.93
SLC13A3-204ENST00000413164 MYH16Q9H6N6 1097 aa27.11■■□□□ 1.93
SLC13A3-204ENST00000413164 ITSN1Q15811 1721 aa27.11■■□□□ 1.93
SLC13A3-204ENST00000413164 MS4A1P11836 297 aa27.11■■□□□ 1.93
SLC13A3-204ENST00000413164 RARSP54136 660 aaKnown RBP27.11■■□□□ 1.93
SLC13A3-204ENST00000413164 AATKQ6ZMQ8 1374 aa27.1■■□□□ 1.93
SLC13A3-204ENST00000413164 CENPQQ7L2Z9 268 aaPredicted RBP27.09■■□□□ 1.93
SLC13A3-204ENST00000413164 TRIM35Q9UPQ4 493 aa27.09■■□□□ 1.93
SLC13A3-204ENST00000413164 PTPRUQ92729 1446 aa27.09■■□□□ 1.93
SLC13A3-204ENST00000413164 TOPAZ1Q8N9V7 1692 aa27.08■■□□□ 1.93
SLC13A3-204ENST00000413164 NME9Q86XW9 330 aa27.08■■□□□ 1.93
SLC13A3-204ENST00000413164 MAPK8IP3Q9UPT6 1336 aa27.08■■□□□ 1.93
SLC13A3-204ENST00000413164 PNNQ9H307 717 aaKnown RBP27.07■■□□□ 1.92
SLC13A3-204ENST00000413164 AMOTL2Q9Y2J4 779 aa27.07■■□□□ 1.92
SLC13A3-204ENST00000413164 LRRC7Q96NW7 1537 aa27.07■■□□□ 1.92
SLC13A3-204ENST00000413164 FCHSD2O94868 740 aa27.07■■□□□ 1.92
SLC13A3-204ENST00000413164 FBLN1P23142 703 aa27.07■■□□□ 1.92
SLC13A3-204ENST00000413164 ZNF692Q9BU19 519 aaPredicted RBP27.06■■□□□ 1.92
SLC13A3-204ENST00000413164 CDK12Q9NYV4 1490 aaPredicted RBP27.06■■□□□ 1.92
SLC13A3-204ENST00000413164 ANP32EQ9BTT0 268 aa27.06■■□□□ 1.92
SLC13A3-204ENST00000413164 IL16Q14005 1332 aa27.04■■□□□ 1.92
SLC13A3-204ENST00000413164 NRKQ7Z2Y5 1582 aa27.04■■□□□ 1.92
SLC13A3-204ENST00000413164 PIK3R4Q99570 1358 aa27.03■■□□□ 1.92
SLC13A3-204ENST00000413164 RSPH6AQ9H0K4 717 aa27.02■■□□□ 1.92
SLC13A3-204ENST00000413164 ZRANB1Q9UGI0 708 aa27.02■■□□□ 1.92
SLC13A3-204ENST00000413164 CT47B1P0C2W7 299 aaPredicted RBP27.02■■□□□ 1.92
SLC13A3-204ENST00000413164 EMILIN1Q9Y6C2 1016 aa27.01■■□□□ 1.91
SLC13A3-204ENST00000413164 PTCH1Q13635 1447 aa27■■□□□ 1.91
SLC13A3-204ENST00000413164 PPM1GO15355 546 aaPredicted RBP27■■□□□ 1.91
SLC13A3-204ENST00000413164 COG3Q96JB2 828 aa27■■□□□ 1.91
SLC13A3-204ENST00000413164 PLEKHG3A1L390 1219 aa26.99■■□□□ 1.91
SLC13A3-204ENST00000413164 RIPK4P57078 832 aa26.99■■□□□ 1.91
SLC13A3-204ENST00000413164 PDE4AP27815 886 aa26.99■■□□□ 1.91
SLC13A3-204ENST00000413164 KCNA6P17658 529 aa26.98■■□□□ 1.91
SLC13A3-204ENST00000413164 IL13P35225 146 aa26.98■■□□□ 1.91
SLC13A3-204ENST00000413164 PANK1Q8TE04 598 aa26.98■■□□□ 1.91
SLC13A3-204ENST00000413164 BACH2Q9BYV9 841 aa26.98■■□□□ 1.91
SLC13A3-204ENST00000413164 CANXP27824 592 aaKnown RBP26.97■■□□□ 1.91
SLC13A3-204ENST00000413164 SKAP1Q86WV1 359 aa26.97■■□□□ 1.91
SLC13A3-204ENST00000413164 CHD2O14647 1828 aaKnown RBP26.97■■□□□ 1.91
SLC13A3-204ENST00000413164 TSR2Q969E8 191 aaKnown RBP26.97■■□□□ 1.91
SLC13A3-204ENST00000413164 STRCQ7RTU9 1775 aa26.96■■□□□ 1.91
SLC13A3-204ENST00000413164 PRKAR2BP31323 418 aa26.96■■□□□ 1.91
SLC13A3-204ENST00000413164 FRAT1Q92837 279 aaPredicted RBP26.96■■□□□ 1.91
SLC13A3-204ENST00000413164 COG6Q9Y2V7 657 aa26.95■■□□□ 1.9
SLC13A3-204ENST00000413164 ACEP12821 1306 aa26.94■■□□□ 1.9
SLC13A3-204ENST00000413164 XRN1Q8IZH2 1706 aaKnown RBP26.94■■□□□ 1.9
SLC13A3-204ENST00000413164 USP6P35125 1406 aa26.94■■□□□ 1.9
SLC13A3-204ENST00000413164 TTC21BQ7Z4L5 1316 aa26.94■■□□□ 1.9
SLC13A3-204ENST00000413164 CLUAP1Q96AJ1 413 aa26.94■■□□□ 1.9
SLC13A3-204ENST00000413164 AAMPQ13685 434 aa26.93■■□□□ 1.9
SLC13A3-204ENST00000413164 BCL2L13Q9BXK5 485 aa26.92■■□□□ 1.9
SLC13A3-204ENST00000413164 OVOS2A0A0J9YW53 1432 aa26.92■■□□□ 1.9
SLC13A3-204ENST00000413164 OVOS2Q6IE36 1432 aa26.92■■□□□ 1.9
SLC13A3-204ENST00000413164 SSH2Q76I76 1423 aa26.92■■□□□ 1.9
SLC13A3-204ENST00000413164 RLBP1P12271 317 aa26.92■■□□□ 1.9
SLC13A3-204ENST00000413164 EXOSC9Q06265 439 aaKnown RBP26.92■■□□□ 1.9
SLC13A3-204ENST00000413164 NALCNQ8IZF0 1738 aa26.91■■□□□ 1.9
SLC13A3-204ENST00000413164 RRS1Q15050 365 aaKnown RBP26.9■■□□□ 1.9
SLC13A3-204ENST00000413164 PHACTR3Q96KR7 559 aa26.9■■□□□ 1.9
SLC13A3-204ENST00000413164 TNNQ9UQP3 1299 aa26.89■■□□□ 1.9
SLC13A3-204ENST00000413164 HMOX1P09601 288 aa26.89■■□□□ 1.89
SLC13A3-204ENST00000413164 ANP32AP39687 249 aaKnown RBP26.89■■□□□ 1.89
SLC13A3-204ENST00000413164 NFE2L2Q16236 605 aa26.89■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms