RNA–Protein interactions for RNA: ENST00000413146.6

TNFRSF8-202, Transcript of TNF receptor superfamily member 8, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF8, Length 2,363 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF8-202ENST00000413146 IDI1Q13907 227 aa24.18■■□□□ 1.46
TNFRSF8-202ENST00000413146 PLEKHF1Q96S99 279 aa24.18■■□□□ 1.46
TNFRSF8-202ENST00000413146 ATAD2Q6PL18 1390 aa24.18■■□□□ 1.46
TNFRSF8-202ENST00000413146 TMPOP42166 694 aaKnown RBP24.18■■□□□ 1.46
TNFRSF8-202ENST00000413146 BRPF3Q9ULD4 1205 aa24.18■■□□□ 1.46
TNFRSF8-202ENST00000413146 EXOSC9Q06265 439 aaKnown RBP24.17■■□□□ 1.46
TNFRSF8-202ENST00000413146 FAM69CQ0P6D2 419 aa24.16■■□□□ 1.46
TNFRSF8-202ENST00000413146 TERF2IPQ9NYB0 399 aa24.16■■□□□ 1.46
TNFRSF8-202ENST00000413146 SLKQ9H2G2 1235 aaPredicted RBP24.16■■□□□ 1.46
TNFRSF8-202ENST00000413146 SLC52A1Q9NWF4 448 aa24.16■■□□□ 1.46
TNFRSF8-202ENST00000413146 CLTCQ00610 1675 aaKnown RBP24.15■■□□□ 1.46
TNFRSF8-202ENST00000413146 MED14O60244 1454 aa24.15■■□□□ 1.46
TNFRSF8-202ENST00000413146 PTPRMP28827 1452 aa24.15■■□□□ 1.46
TNFRSF8-202ENST00000413146 TRIM35Q9UPQ4 493 aa24.15■■□□□ 1.46
TNFRSF8-202ENST00000413146 TRIM27P14373 513 aa24.14■■□□□ 1.45
TNFRSF8-202ENST00000413146 DDX19BQ9UMR2 479 aa24.14■■□□□ 1.45
TNFRSF8-202ENST00000413146 PRKCSHP14314 528 aaPredicted RBP24.13■■□□□ 1.45
TNFRSF8-202ENST00000413146 SENP3Q9H4L4 574 aaPredicted RBP24.13■■□□□ 1.45
TNFRSF8-202ENST00000413146 IL16Q14005 1332 aa24.13■■□□□ 1.45
TNFRSF8-202ENST00000413146 MINK1Q8N4C8 1332 aaPredicted RBP24.12■■□□□ 1.45
TNFRSF8-202ENST00000413146 TMEM131LA2VDJ0 1609 aa24.12■■□□□ 1.45
TNFRSF8-202ENST00000413146 PREX1Q8TCU6 1659 aa24.12■■□□□ 1.45
TNFRSF8-202ENST00000413146 ITPRIPQ8IWB1 547 aa24.12■■□□□ 1.45
TNFRSF8-202ENST00000413146 SSH1Q8WYL5 1049 aa24.12■■□□□ 1.45
TNFRSF8-202ENST00000413146 FYB1O15117 783 aa24.11■■□□□ 1.45
TNFRSF8-202ENST00000413146 ATF7IPQ6VMQ6 1270 aa24.11■■□□□ 1.45
TNFRSF8-202ENST00000413146 RICTORQ6R327 1708 aa24.11■■□□□ 1.45
TNFRSF8-202ENST00000413146 KIF13AQ9H1H9 1805 aa24.1■■□□□ 1.45
TNFRSF8-202ENST00000413146 HDAC1Q13547 482 aaPredicted RBP24.1■■□□□ 1.45
TNFRSF8-202ENST00000413146 PRAM1Q96QH2 718 aa24.1■■□□□ 1.45
TNFRSF8-202ENST00000413146 POGKQ9P215 609 aa24.1■■□□□ 1.45
TNFRSF8-202ENST00000413146 CD163L1Q9NR16 1453 aa24.1■■□□□ 1.45
TNFRSF8-202ENST00000413146 TSPOAP1O95153 1857 aa24.1■■□□□ 1.45
TNFRSF8-202ENST00000413146 KIF20BQ96Q89 1820 aa24.09■■□□□ 1.45
TNFRSF8-202ENST00000413146 PNNQ9H307 717 aaKnown RBP24.09■■□□□ 1.45
TNFRSF8-202ENST00000413146 YTHDC2Q9H6S0 1430 aaKnown RBP24.09■■□□□ 1.45
TNFRSF8-202ENST00000413146 RIPK4P57078 832 aa24.09■■□□□ 1.45
TNFRSF8-202ENST00000413146 TBC1D2Q9BYX2 928 aa24.09■■□□□ 1.45
TNFRSF8-202ENST00000413146 DIAPH1O60610 1272 aaKnown RBP24.08■■□□□ 1.45
TNFRSF8-202ENST00000413146 HDGFL2Q7Z4V5 671 aaPredicted RBP24.08■■□□□ 1.45
TNFRSF8-202ENST00000413146 ANTXR1Q9H6X2 564 aa24.08■■□□□ 1.45
TNFRSF8-202ENST00000413146 NOB1Q9ULX3 412 aaKnown RBP24.07■■□□□ 1.44
TNFRSF8-202ENST00000413146 KIF16BQ96L93 1317 aa24.07■■□□□ 1.44
TNFRSF8-202ENST00000413146 IPO8O15397 1037 aaKnown RBP24.04■■□□□ 1.44
TNFRSF8-202ENST00000413146 PNPLA6Q8IY17 1366 aa24.04■■□□□ 1.44
TNFRSF8-202ENST00000413146 YEATS2Q9ULM3 1422 aa24.04■■□□□ 1.44
TNFRSF8-202ENST00000413146 TMEM57Q8N5G2 664 aa24.03■■□□□ 1.44
TNFRSF8-202ENST00000413146 CDC42BPGQ6DT37 1551 aa24.02■■□□□ 1.44
TNFRSF8-202ENST00000413146 SMC5Q8IY18 1101 aa24.02■■□□□ 1.44
TNFRSF8-202ENST00000413146 C22orf23Q9BZE7 217 aa24.02■■□□□ 1.44
TNFRSF8-202ENST00000413146 LRRC7Q96NW7 1537 aa24.02■■□□□ 1.44
TNFRSF8-202ENST00000413146 MFAP1P55081 439 aaKnown RBP24.02■■□□□ 1.44
TNFRSF8-202ENST00000413146 ALKQ9UM73 1620 aa24.01■■□□□ 1.43
TNFRSF8-202ENST00000413146 CDK19Q9BWU1 502 aa24.01■■□□□ 1.43
TNFRSF8-202ENST00000413146 ZBTB40Q9NUA8 1239 aa24■■□□□ 1.43
TNFRSF8-202ENST00000413146 ALDH1L2Q3SY69 923 aa24■■□□□ 1.43
TNFRSF8-202ENST00000413146 ARHGEF40Q8TER5 1519 aa23.99■■□□□ 1.43
TNFRSF8-202ENST00000413146 FCHSD2O94868 740 aa23.99■■□□□ 1.43
TNFRSF8-202ENST00000413146 CABP1Q9NZU7 370 aa23.99■■□□□ 1.43
TNFRSF8-202ENST00000413146 FAM135BQ49AJ0 1406 aa23.96■■□□□ 1.43
TNFRSF8-202ENST00000413146 PRKAR2BP31323 418 aa23.95■■□□□ 1.42
TNFRSF8-202ENST00000413146 SPRYD3Q8NCJ5 442 aa23.95■■□□□ 1.42
TNFRSF8-202ENST00000413146 ZNF428Q96B54 188 aa23.94■■□□□ 1.42
TNFRSF8-202ENST00000413146 RSPH6AQ9H0K4 717 aa23.94■■□□□ 1.42
TNFRSF8-202ENST00000413146 STAG3Q9UJ98 1225 aa23.94■■□□□ 1.42
TNFRSF8-202ENST00000413146 NUCB1Q02818 461 aa23.93■■□□□ 1.42
TNFRSF8-202ENST00000413146 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.93■■□□□ 1.42
TNFRSF8-202ENST00000413146 ATP7BP35670 1465 aa23.93■■□□□ 1.42
TNFRSF8-202ENST00000413146 FBXO31Q5XUX0 539 aaPredicted RBP23.92■■□□□ 1.42
TNFRSF8-202ENST00000413146 PPIP5K1Q6PFW1 1433 aa23.92■■□□□ 1.42
TNFRSF8-202ENST00000413146 POLKQ9UBT6 870 aa23.91■■□□□ 1.42
TNFRSF8-202ENST00000413146 MAP2P11137 1827 aaKnown RBP23.91■■□□□ 1.42
TNFRSF8-202ENST00000413146 L1TD1Q5T7N2 865 aaKnown RBP23.91■■□□□ 1.42
TNFRSF8-202ENST00000413146 HSCBQ8IWL3 235 aa23.91■■□□□ 1.42
TNFRSF8-202ENST00000413146 CHMP5Q9NZZ3 219 aa23.91■■□□□ 1.42
TNFRSF8-202ENST00000413146 DLC1Q96QB1 1528 aa23.9■■□□□ 1.42
TNFRSF8-202ENST00000413146 BRPF1P55201 1214 aaPredicted RBP23.9■■□□□ 1.42
TNFRSF8-202ENST00000413146 LNPKQ9C0E8 428 aa23.89■■□□□ 1.42
TNFRSF8-202ENST00000413146 ANO8Q9HCE9 1232 aaPredicted RBP23.89■■□□□ 1.42
TNFRSF8-202ENST00000413146 CALD1Q05682 793 aaKnown RBP23.89■■□□□ 1.41
TNFRSF8-202ENST00000413146 NFE2L2Q16236 605 aa23.88■■□□□ 1.41
TNFRSF8-202ENST00000413146 CHD1LQ86WJ1 897 aa23.88■■□□□ 1.41
TNFRSF8-202ENST00000413146 CHMP4BQ9H444 224 aaKnown RBP23.88■■□□□ 1.41
TNFRSF8-202ENST00000413146 MCM4P33991 863 aa23.87■■□□□ 1.41
TNFRSF8-202ENST00000413146 HMOX1P09601 288 aa23.86■■□□□ 1.41
TNFRSF8-202ENST00000413146 FBLN1P23142 703 aa23.86■■□□□ 1.41
TNFRSF8-202ENST00000413146 PTCH1Q13635 1447 aa23.85■■□□□ 1.41
TNFRSF8-202ENST00000413146 FAM43AQ8N2R8 423 aa23.85■■□□□ 1.41
TNFRSF8-202ENST00000413146 PHACTR3Q96KR7 559 aa23.85■■□□□ 1.41
TNFRSF8-202ENST00000413146 RBM25P49756 843 aaKnown RBP23.84■■□□□ 1.41
TNFRSF8-202ENST00000413146 GNAI1P63096 354 aa23.84■■□□□ 1.41
TNFRSF8-202ENST00000413146 WAPLQ7Z5K2 1190 aa23.84■■□□□ 1.41
TNFRSF8-202ENST00000413146 ARHGAP45Q92619 1136 aa23.84■■□□□ 1.41
TNFRSF8-202ENST00000413146 VAMP4O75379 141 aa23.84■■□□□ 1.41
TNFRSF8-202ENST00000413146 MRPL50Q8N5N7 158 aaKnown RBP23.84■■□□□ 1.41
TNFRSF8-202ENST00000413146 GCC1Q96CN9 775 aa23.83■■□□□ 1.41
TNFRSF8-202ENST00000413146 THUMPD2Q9BTF0 503 aaKnown RBP23.83■■□□□ 1.41
TNFRSF8-202ENST00000413146 SETD1AO15047 1707 aaKnown RBP23.83■■□□□ 1.4
TNFRSF8-202ENST00000413146 ZBTB7BO15156 539 aaPredicted RBP23.83■■□□□ 1.4
TNFRSF8-202ENST00000413146 BMP2KLQ5H9B9 411 aa23.83■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms