RNA–Protein interactions for RNA: ENST00000413023.1

HMGN1P34-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 34, humanhuman

BASIC

Gene HMGN1P34, Length 290 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P34-201ENST00000413023 SPINK5Q9NQ38 1064 aaPredicted RBP11.49□□□□□ -0.57
HMGN1P34-201ENST00000413023 EDC4Q6P2E9 1401 aaKnown RBP11.49□□□□□ -0.57
HMGN1P34-201ENST00000413023 SSH2Q76I76 1423 aa11.49□□□□□ -0.57
HMGN1P34-201ENST00000413023 NKTRP30414 1462 aaKnown RBP11.49□□□□□ -0.57
HMGN1P34-201ENST00000413023 PDE3BQ13370 1112 aa11.48□□□□□ -0.57
HMGN1P34-201ENST00000413023 RNF123Q5XPI4 1314 aa11.48□□□□□ -0.57
HMGN1P34-201ENST00000413023 PNPLA6Q8IY17 1366 aa11.48□□□□□ -0.57
HMGN1P34-201ENST00000413023 CDC42BPGQ6DT37 1551 aa11.48□□□□□ -0.57
HMGN1P34-201ENST00000413023 COL3A1P02461 1466 aaPredicted RBP11.47□□□□□ -0.57
HMGN1P34-201ENST00000413023 TRMT2AQ8IZ69 625 aaKnown RBP11.47□□□□□ -0.57
HMGN1P34-201ENST00000413023 EMILIN1Q9Y6C2 1016 aa11.47□□□□□ -0.57
HMGN1P34-201ENST00000413023 CFAP53Q96M91 514 aa11.46□□□□□ -0.57
HMGN1P34-201ENST00000413023 PLEKHF1Q96S99 279 aa11.46□□□□□ -0.57
HMGN1P34-201ENST00000413023 SHPRHQ149N8 1683 aa11.46□□□□□ -0.58
HMGN1P34-201ENST00000413023 SLFN5Q08AF3 891 aa11.45□□□□□ -0.58
HMGN1P34-201ENST00000413023 TCP11L2Q8N4U5 519 aa11.45□□□□□ -0.58
HMGN1P34-201ENST00000413023 RUNDC1Q96C34 613 aa11.45□□□□□ -0.58
HMGN1P34-201ENST00000413023 RRP7AQ9Y3A4 280 aaKnown RBP11.45□□□□□ -0.58
HMGN1P34-201ENST00000413023 USP6P35125 1406 aa11.44□□□□□ -0.58
HMGN1P34-201ENST00000413023 CHD2O14647 1828 aaKnown RBP11.44□□□□□ -0.58
HMGN1P34-201ENST00000413023 U2AF1L5P0DN76 240 aaPredicted RBP11.44□□□□□ -0.58
HMGN1P34-201ENST00000413023 U2AF1Q01081 240 aaKnown RBP eCLIP11.44□□□□□ -0.58
HMGN1P34-201ENST00000413023 RRS1Q15050 365 aaKnown RBP11.44□□□□□ -0.58
HMGN1P34-201ENST00000413023 DUSP27Q5VZP5 1158 aa11.44□□□□□ -0.58
HMGN1P34-201ENST00000413023 COG3Q96JB2 828 aa11.44□□□□□ -0.58
HMGN1P34-201ENST00000413023 PPM1GO15355 546 aaPredicted RBP11.43□□□□□ -0.58
HMGN1P34-201ENST00000413023 DIAPH1O60610 1272 aaKnown RBP11.43□□□□□ -0.58
HMGN1P34-201ENST00000413023 IL13P35225 146 aa11.43□□□□□ -0.58
HMGN1P34-201ENST00000413023 PROSER2Q86WR7 435 aaPredicted RBP11.43□□□□□ -0.58
HMGN1P34-201ENST00000413023 NGDNQ8NEJ9 315 aaKnown RBP11.43□□□□□ -0.58
HMGN1P34-201ENST00000413023 TOPAZ1Q8N9V7 1692 aa11.43□□□□□ -0.58
HMGN1P34-201ENST00000413023 AATKQ6ZMQ8 1374 aa11.42□□□□□ -0.58
HMGN1P34-201ENST00000413023 AKAP12Q02952 1782 aa11.42□□□□□ -0.58
HMGN1P34-201ENST00000413023 U2SURPO15042 1029 aaKnown RBP11.42□□□□□ -0.58
HMGN1P34-201ENST00000413023 WWC1Q8IX03 1113 aa11.42□□□□□ -0.58
HMGN1P34-201ENST00000413023 ORAI2Q96SN7 254 aa11.42□□□□□ -0.58
HMGN1P34-201ENST00000413023 ANKARQ7Z5J8 1434 aa11.42□□□□□ -0.58
HMGN1P34-201ENST00000413023 MON2Q7Z3U7 1717 aa11.41□□□□□ -0.58
HMGN1P34-201ENST00000413023 GOLGA2Q08379 1002 aa11.41□□□□□ -0.58
HMGN1P34-201ENST00000413023 NEUROD2Q15784 382 aa11.41□□□□□ -0.58
HMGN1P34-201ENST00000413023 RCAN3Q9UKA8 241 aa11.41□□□□□ -0.58
HMGN1P34-201ENST00000413023 PHF8Q9UPP1 1060 aa11.41□□□□□ -0.58
HMGN1P34-201ENST00000413023 USP31Q70CQ4 1352 aa11.41□□□□□ -0.58
HMGN1P34-201ENST00000413023 ANKRD26Q9UPS8 1709 aa11.4□□□□□ -0.58
HMGN1P34-201ENST00000413023 NEFLP07196 543 aa11.4□□□□□ -0.58
HMGN1P34-201ENST00000413023 NUTM2GQ5VZR2 741 aa11.4□□□□□ -0.58
HMGN1P34-201ENST00000413023 ADGRL3Q9HAR2 1447 aa11.4□□□□□ -0.58
HMGN1P34-201ENST00000413023 TTC21AQ8NDW8 1320 aa11.39□□□□□ -0.59
HMGN1P34-201ENST00000413023 RGPD8O14715 1765 aaPredicted RBP11.39□□□□□ -0.59
HMGN1P34-201ENST00000413023 OVOS2A0A0J9YW53 1432 aa11.39□□□□□ -0.59
HMGN1P34-201ENST00000413023 OVOS2Q6IE36 1432 aa11.39□□□□□ -0.59
HMGN1P34-201ENST00000413023 PHACTR3Q96KR7 559 aa11.39□□□□□ -0.59
HMGN1P34-201ENST00000413023 RSPH6AQ9H0K4 717 aa11.39□□□□□ -0.59
HMGN1P34-201ENST00000413023 FMN2Q9NZ56 1722 aa11.39□□□□□ -0.59
HMGN1P34-201ENST00000413023 TRIM35Q9UPQ4 493 aa11.39□□□□□ -0.59
HMGN1P34-201ENST00000413023 KIF20BQ96Q89 1820 aa11.39□□□□□ -0.59
HMGN1P34-201ENST00000413023 IQSEC2Q5JU85 1478 aa11.38□□□□□ -0.59
HMGN1P34-201ENST00000413023 NRKQ7Z2Y5 1582 aa11.38□□□□□ -0.59
HMGN1P34-201ENST00000413023 FCHSD2O94868 740 aa11.38□□□□□ -0.59
HMGN1P34-201ENST00000413023 TMPOP42166 694 aaKnown RBP11.38□□□□□ -0.59
HMGN1P34-201ENST00000413023 HSP90AB2PQ58FF8 381 aa11.38□□□□□ -0.59
HMGN1P34-201ENST00000413023 ESCO1Q5FWF5 840 aa11.38□□□□□ -0.59
HMGN1P34-201ENST00000413023 NALCNQ8IZF0 1738 aa11.38□□□□□ -0.59
HMGN1P34-201ENST00000413023 SOX12O15370 315 aa11.37□□□□□ -0.59
HMGN1P34-201ENST00000413023 HMOX1P09601 288 aa11.37□□□□□ -0.59
HMGN1P34-201ENST00000413023 NLRP6P59044 892 aa11.37□□□□□ -0.59
HMGN1P34-201ENST00000413023 CCDC27Q2M243 656 aa11.37□□□□□ -0.59
HMGN1P34-201ENST00000413023 NCBP3Q53F19 620 aaKnown RBP11.37□□□□□ -0.59
HMGN1P34-201ENST00000413023 NGEFQ8N5V2 710 aa11.37□□□□□ -0.59
HMGN1P34-201ENST00000413023 NWD1Q149M9 1564 aa11.37□□□□□ -0.59
HMGN1P34-201ENST00000413023 MAP3K19Q56UN5 1328 aa11.36□□□□□ -0.59
HMGN1P34-201ENST00000413023 PLIN1O60240 522 aa11.36□□□□□ -0.59
HMGN1P34-201ENST00000413023 RRP1P56182 461 aaKnown RBP11.36□□□□□ -0.59
HMGN1P34-201ENST00000413023 EIF4A2Q14240 407 aaKnown RBP11.36□□□□□ -0.59
HMGN1P34-201ENST00000413023 C14orf37Q86TY3 774 aa11.36□□□□□ -0.59
HMGN1P34-201ENST00000413023 WDR63Q8IWG1 891 aa11.36□□□□□ -0.59
HMGN1P34-201ENST00000413023 C19orf44Q9H6X5 657 aa11.36□□□□□ -0.59
HMGN1P34-201ENST00000413023 LMTK3Q96Q04 1460 aa11.36□□□□□ -0.59
HMGN1P34-201ENST00000413023 ITSN1Q15811 1721 aa11.35□□□□□ -0.59
HMGN1P34-201ENST00000413023 FOXO3O43524 673 aa11.35□□□□□ -0.59
HMGN1P34-201ENST00000413023 PRKAR2BP31323 418 aa11.35□□□□□ -0.59
HMGN1P34-201ENST00000413023 XPCQ01831 940 aaPredicted RBP11.35□□□□□ -0.59
HMGN1P34-201ENST00000413023 TMEM94Q12767 1356 aa11.35□□□□□ -0.59
HMGN1P34-201ENST00000413023 E9PSI1 815 aa11.34□□□□□ -0.59
HMGN1P34-201ENST00000413023 ERICH6BQ5W0A0 696 aa11.34□□□□□ -0.59
HMGN1P34-201ENST00000413023 AEBP1Q8IUX7 1158 aa11.34□□□□□ -0.59
HMGN1P34-201ENST00000413023 ABTB2Q8N961 1025 aa11.34□□□□□ -0.59
HMGN1P34-201ENST00000413023 PPP4R2Q9NY27 417 aa11.34□□□□□ -0.59
HMGN1P34-201ENST00000413023 STRCP1A6NGW2 1772 aa11.33□□□□□ -0.59
HMGN1P34-201ENST00000413023 CDK12Q9NYV4 1490 aaPredicted RBP11.33□□□□□ -0.6
HMGN1P34-201ENST00000413023 MAP2P11137 1827 aaKnown RBP11.33□□□□□ -0.6
HMGN1P34-201ENST00000413023 PAK3O75914 559 aaPredicted RBP11.33□□□□□ -0.6
HMGN1P34-201ENST00000413023 RIPK4P57078 832 aa11.33□□□□□ -0.6
HMGN1P34-201ENST00000413023 PSME1Q06323 249 aa11.33□□□□□ -0.6
HMGN1P34-201ENST00000413023 C20orf194Q5TEA3 1177 aa11.33□□□□□ -0.6
HMGN1P34-201ENST00000413023 PEAK1Q9H792 1746 aa11.32□□□□□ -0.6
HMGN1P34-201ENST00000413023 KRT28Q7Z3Y7 464 aa11.32□□□□□ -0.6
HMGN1P34-201ENST00000413023 EXOC6Q8TAG9 804 aa11.32□□□□□ -0.6
HMGN1P34-201ENST00000413023 DDX17Q92841 729 aaKnown RBP11.32□□□□□ -0.6
HMGN1P34-201ENST00000413023 C1orf167Q5SNV9 1468 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms