RNA–Protein interactions for RNA: ENST00000412866.2

VSIG4-202, Transcript of V-set and immunoglobulin domain containing 4, humanhuman

TSL 2 BASIC

Gene VSIG4, Length 1,474 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSIG4-202ENST00000412866 SSH2Q76I76 1423 aa12.95□□□□□ -0.34
VSIG4-202ENST00000412866 PROSER2Q86WR7 435 aaPredicted RBP12.95□□□□□ -0.34
VSIG4-202ENST00000412866 NGDNQ8NEJ9 315 aaKnown RBP12.95□□□□□ -0.34
VSIG4-202ENST00000412866 PMFBP1Q8TBY8 1022 aa12.95□□□□□ -0.34
VSIG4-202ENST00000412866 GTF3C3Q9Y5Q9 886 aa12.95□□□□□ -0.34
VSIG4-202ENST00000412866 STRCQ7RTU9 1775 aa12.95□□□□□ -0.34
VSIG4-202ENST00000412866 TTC21AQ8NDW8 1320 aa12.93□□□□□ -0.34
VSIG4-202ENST00000412866 COL3A1P02461 1466 aaPredicted RBP12.93□□□□□ -0.34
VSIG4-202ENST00000412866 STRCP1A6NGW2 1772 aa12.93□□□□□ -0.34
VSIG4-202ENST00000412866 COG3Q96JB2 828 aa12.93□□□□□ -0.34
VSIG4-202ENST00000412866 AATKQ6ZMQ8 1374 aa12.93□□□□□ -0.34
VSIG4-202ENST00000412866 OVOS2A0A0J9YW53 1432 aa12.92□□□□□ -0.34
VSIG4-202ENST00000412866 OVOS2Q6IE36 1432 aa12.92□□□□□ -0.34
VSIG4-202ENST00000412866 SMG6Q86US8 1419 aaKnown RBP12.92□□□□□ -0.34
VSIG4-202ENST00000412866 NCOA3Q9Y6Q9 1424 aa12.92□□□□□ -0.34
VSIG4-202ENST00000412866 ZRANB1Q9UGI0 708 aa12.91□□□□□ -0.34
VSIG4-202ENST00000412866 PHF8Q9UPP1 1060 aa12.91□□□□□ -0.34
VSIG4-202ENST00000412866 TMEM94Q12767 1356 aa12.91□□□□□ -0.34
VSIG4-202ENST00000412866 SENP3-EIF4A1A0A087X0R7 540 aa12.91□□□□□ -0.34
VSIG4-202ENST00000412866 PNPLA6Q8IY17 1366 aa12.9□□□□□ -0.34
VSIG4-202ENST00000412866 DCCP43146 1447 aa12.9□□□□□ -0.34
VSIG4-202ENST00000412866 C19orf44Q9H6X5 657 aa12.9□□□□□ -0.34
VSIG4-202ENST00000412866 CDK12Q9NYV4 1490 aaPredicted RBP12.9□□□□□ -0.34
VSIG4-202ENST00000412866 PIK3C2AO00443 1686 aa12.9□□□□□ -0.34
VSIG4-202ENST00000412866 USP31Q70CQ4 1352 aa12.89□□□□□ -0.35
VSIG4-202ENST00000412866 POLKQ9UBT6 870 aa12.89□□□□□ -0.35
VSIG4-202ENST00000412866 ESCO1Q5FWF5 840 aa12.88□□□□□ -0.35
VSIG4-202ENST00000412866 CCDC146Q8IYE0 955 aa12.88□□□□□ -0.35
VSIG4-202ENST00000412866 NUDCQ9Y266 331 aa12.88□□□□□ -0.35
VSIG4-202ENST00000412866 LRRC7Q96NW7 1537 aa12.88□□□□□ -0.35
VSIG4-202ENST00000412866 USP54Q70EL1 1684 aa12.88□□□□□ -0.35
VSIG4-202ENST00000412866 PDE3BQ13370 1112 aa12.87□□□□□ -0.35
VSIG4-202ENST00000412866 SALL2Q9Y467 1007 aaPredicted RBP12.87□□□□□ -0.35
VSIG4-202ENST00000412866 KIF1AQ12756 1690 aa12.87□□□□□ -0.35
VSIG4-202ENST00000412866 C1orf167Q5SNV9 1468 aa12.87□□□□□ -0.35
VSIG4-202ENST00000412866 MAP2P11137 1827 aaKnown RBP12.86□□□□□ -0.35
VSIG4-202ENST00000412866 DIAPH1O60610 1272 aaKnown RBP12.86□□□□□ -0.35
VSIG4-202ENST00000412866 ATF3P18847 181 aa12.86□□□□□ -0.35
VSIG4-202ENST00000412866 EMILIN1Q9Y6C2 1016 aa12.86□□□□□ -0.35
VSIG4-202ENST00000412866 IQSEC2Q5JU85 1478 aa12.86□□□□□ -0.35
VSIG4-202ENST00000412866 MST1RQ04912 1400 aa12.85□□□□□ -0.35
VSIG4-202ENST00000412866 PPM1GO15355 546 aaPredicted RBP12.85□□□□□ -0.35
VSIG4-202ENST00000412866 U2AF1L5P0DN76 240 aaPredicted RBP12.85□□□□□ -0.35
VSIG4-202ENST00000412866 FBLN1P23142 703 aa12.85□□□□□ -0.35
VSIG4-202ENST00000412866 U2AF1Q01081 240 aaKnown RBP eCLIP12.85□□□□□ -0.35
VSIG4-202ENST00000412866 NGEFQ8N5V2 710 aa12.85□□□□□ -0.35
VSIG4-202ENST00000412866 RUNDC1Q96C34 613 aa12.85□□□□□ -0.35
VSIG4-202ENST00000412866 MSH6P52701 1360 aa12.85□□□□□ -0.35
VSIG4-202ENST00000412866 APAF1O14727 1248 aa12.85□□□□□ -0.35
VSIG4-202ENST00000412866 U2SURPO15042 1029 aaKnown RBP12.85□□□□□ -0.35
VSIG4-202ENST00000412866 RRS1Q15050 365 aaKnown RBP12.85□□□□□ -0.35
VSIG4-202ENST00000412866 PSME1Q06323 249 aa12.84□□□□□ -0.35
VSIG4-202ENST00000412866 CADPS2Q86UW7 1296 aa12.84□□□□□ -0.35
VSIG4-202ENST00000412866 ORAI2Q96SN7 254 aa12.84□□□□□ -0.35
VSIG4-202ENST00000412866 MARF1Q9Y4F3 1742 aaKnown RBP12.83□□□□□ -0.36
VSIG4-202ENST00000412866 PAK3O75914 559 aaPredicted RBP12.83□□□□□ -0.36
VSIG4-202ENST00000412866 XIRP1Q702N8 1843 aaKnown RBP12.83□□□□□ -0.36
VSIG4-202ENST00000412866 ZNF521Q96K83 1311 aa12.83□□□□□ -0.36
VSIG4-202ENST00000412866 ZNF335Q9H4Z2 1342 aaPredicted RBP12.83□□□□□ -0.36
VSIG4-202ENST00000412866 NEFLP07196 543 aa12.82□□□□□ -0.36
VSIG4-202ENST00000412866 NLRP6P59044 892 aa12.82□□□□□ -0.36
VSIG4-202ENST00000412866 ABTB2Q8N961 1025 aa12.82□□□□□ -0.36
VSIG4-202ENST00000412866 DMRT2Q9Y5R5 561 aa12.82□□□□□ -0.36
VSIG4-202ENST00000412866 PEAK1Q9H792 1746 aa12.81□□□□□ -0.36
VSIG4-202ENST00000412866 TRPM3Q9HCF6 1732 aaPredicted RBP12.8□□□□□ -0.36
VSIG4-202ENST00000412866 SOX12O15370 315 aa12.8□□□□□ -0.36
VSIG4-202ENST00000412866 FOXO3O43524 673 aa12.8□□□□□ -0.36
VSIG4-202ENST00000412866 IL13P35225 146 aa12.8□□□□□ -0.36
VSIG4-202ENST00000412866 PNNQ9H307 717 aaKnown RBP12.8□□□□□ -0.36
VSIG4-202ENST00000412866 SUPT16HQ9Y5B9 1047 aaKnown RBP12.8□□□□□ -0.36
VSIG4-202ENST00000412866 SBNO1A3KN83 1393 aa12.8□□□□□ -0.36
VSIG4-202ENST00000412866 NCBP3Q53F19 620 aaKnown RBP12.79□□□□□ -0.36
VSIG4-202ENST00000412866 NUTM2GQ5VZR2 741 aa12.79□□□□□ -0.36
VSIG4-202ENST00000412866 TCP11L2Q8N4U5 519 aa12.79□□□□□ -0.36
VSIG4-202ENST00000412866 CDCA7LQ96GN5 454 aa12.79□□□□□ -0.36
VSIG4-202ENST00000412866 MAP3K19Q56UN5 1328 aa12.79□□□□□ -0.36
VSIG4-202ENST00000412866 MAPK8IP3Q9UPT6 1336 aa12.79□□□□□ -0.36
VSIG4-202ENST00000412866 FLT4P35916 1363 aa12.79□□□□□ -0.36
VSIG4-202ENST00000412866 GOLGA2Q08379 1002 aa12.78□□□□□ -0.36
VSIG4-202ENST00000412866 KIF24Q5T7B8 1368 aa12.78□□□□□ -0.36
VSIG4-202ENST00000412866 PLEKHF1Q96S99 279 aa12.78□□□□□ -0.36
VSIG4-202ENST00000412866 FCHSD2O94868 740 aa12.78□□□□□ -0.36
VSIG4-202ENST00000412866 NFAT5O94916 1531 aa12.77□□□□□ -0.37
VSIG4-202ENST00000412866 XPCQ01831 940 aaPredicted RBP12.77□□□□□ -0.37
VSIG4-202ENST00000412866 EIF4A2Q14240 407 aaKnown RBP12.77□□□□□ -0.37
VSIG4-202ENST00000412866 CCDC27Q2M243 656 aa12.77□□□□□ -0.37
VSIG4-202ENST00000412866 KRT28Q7Z3Y7 464 aa12.77□□□□□ -0.37
VSIG4-202ENST00000412866 PHF23Q9BUL5 403 aaPredicted RBP12.77□□□□□ -0.37
VSIG4-202ENST00000412866 RSPH6AQ9H0K4 717 aa12.77□□□□□ -0.37
VSIG4-202ENST00000412866 RRP7AQ9Y3A4 280 aaKnown RBP12.77□□□□□ -0.37
VSIG4-202ENST00000412866 SLIT3O75094 1523 aa12.76□□□□□ -0.37
VSIG4-202ENST00000412866 RTL1A6NKG5 1358 aa12.76□□□□□ -0.37
VSIG4-202ENST00000412866 AMPHP49418 695 aa12.76□□□□□ -0.37
VSIG4-202ENST00000412866 FKBP8Q14318 412 aa12.76□□□□□ -0.37
VSIG4-202ENST00000412866 WWC1Q8IX03 1113 aa12.76□□□□□ -0.37
VSIG4-202ENST00000412866 RGPD1P0DJD0 1748 aa12.75□□□□□ -0.37
VSIG4-202ENST00000412866 ALS2Q96Q42 1657 aa12.75□□□□□ -0.37
VSIG4-202ENST00000412866 NPHP3Q7Z494 1330 aa12.75□□□□□ -0.37
VSIG4-202ENST00000412866 E9PSI1 815 aa12.75□□□□□ -0.37
VSIG4-202ENST00000412866 NEFMP07197 916 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 87.9 ms