RNA–Protein interactions for RNA: ENST00000411615.5

LINC02539-201, Transcript of long intergenic non-protein coding RNA 2539, humanhuman

TSL 2 BASIC

Gene LINC02539, Length 737 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02539-201ENST00000411615 NUDT16Q96DE0 195 aaKnown RBP12.18□□□□□ -0.46
LINC02539-201ENST00000411615 MST1RQ04912 1400 aa12.18□□□□□ -0.46
LINC02539-201ENST00000411615 ITSN1Q15811 1721 aa12.17□□□□□ -0.46
LINC02539-201ENST00000411615 KIF7Q2M1P5 1343 aa12.17□□□□□ -0.46
LINC02539-201ENST00000411615 ATP7BP35670 1465 aa12.17□□□□□ -0.46
LINC02539-201ENST00000411615 C1orf167Q5SNV9 1468 aa12.17□□□□□ -0.46
LINC02539-201ENST00000411615 POTEIP0CG38 1075 aa12.17□□□□□ -0.46
LINC02539-201ENST00000411615 CABP2Q9NPB3 220 aa12.17□□□□□ -0.46
LINC02539-201ENST00000411615 SLAIN2Q9P270 581 aa12.17□□□□□ -0.46
LINC02539-201ENST00000411615 USP32Q8NFA0 1604 aa12.17□□□□□ -0.46
LINC02539-201ENST00000411615 CCDC7Q96M83 1385 aa12.17□□□□□ -0.46
LINC02539-201ENST00000411615 PRR36Q9H6K5 1346 aa12.16□□□□□ -0.46
LINC02539-201ENST00000411615 PLEKHG3A1L390 1219 aa12.16□□□□□ -0.46
LINC02539-201ENST00000411615 TOM1O60784 492 aa12.16□□□□□ -0.46
LINC02539-201ENST00000411615 PHF12Q96QT6 1004 aa12.16□□□□□ -0.46
LINC02539-201ENST00000411615 TOPAZ1Q8N9V7 1692 aa12.16□□□□□ -0.46
LINC02539-201ENST00000411615 RGPD8O14715 1765 aaPredicted RBP12.15□□□□□ -0.46
LINC02539-201ENST00000411615 WASHC2AQ641Q2 1341 aa12.15□□□□□ -0.46
LINC02539-201ENST00000411615 KIF1AQ12756 1690 aa12.13□□□□□ -0.47
LINC02539-201ENST00000411615 PPIP5K1Q6PFW1 1433 aa12.12□□□□□ -0.47
LINC02539-201ENST00000411615 NUTM2FA1L443 756 aa12.12□□□□□ -0.47
LINC02539-201ENST00000411615 ESCO1Q5FWF5 840 aa12.12□□□□□ -0.47
LINC02539-201ENST00000411615 SLC12A5Q9H2X9 1139 aa12.12□□□□□ -0.47
LINC02539-201ENST00000411615 TERF2IPQ9NYB0 399 aa12.12□□□□□ -0.47
LINC02539-201ENST00000411615 CABP1Q9NZU7 370 aa12.12□□□□□ -0.47
LINC02539-201ENST00000411615 PHF8Q9UPP1 1060 aa12.12□□□□□ -0.47
LINC02539-201ENST00000411615 POLR3AO14802 1390 aaPredicted RBP12.12□□□□□ -0.47
LINC02539-201ENST00000411615 BRD4O60885 1362 aaPredicted RBP12.12□□□□□ -0.47
LINC02539-201ENST00000411615 MYOM1P52179 1685 aa12.12□□□□□ -0.47
LINC02539-201ENST00000411615 CPSF1Q10570 1443 aaKnown RBP12.11□□□□□ -0.47
LINC02539-201ENST00000411615 GALR2O43603 387 aaPredicted RBP12.11□□□□□ -0.47
LINC02539-201ENST00000411615 ANKRD36BQ8N2N9 1353 aa12.1□□□□□ -0.47
LINC02539-201ENST00000411615 UBAP1LF5GYI3 381 aa12.1□□□□□ -0.47
LINC02539-201ENST00000411615 BRINP3Q76B58 766 aa12.1□□□□□ -0.47
LINC02539-201ENST00000411615 MIER1Q8N108 512 aa12.1□□□□□ -0.47
LINC02539-201ENST00000411615 ZNF579Q8NAF0 562 aaKnown RBP12.1□□□□□ -0.47
LINC02539-201ENST00000411615 TMC1Q8TDI8 760 aa12.1□□□□□ -0.47
LINC02539-201ENST00000411615 ORAI2Q96SN7 254 aa12.1□□□□□ -0.47
LINC02539-201ENST00000411615 ACEP12821 1306 aa12.1□□□□□ -0.47
LINC02539-201ENST00000411615 CD163L1Q9NR16 1453 aa12.09□□□□□ -0.47
LINC02539-201ENST00000411615 HDGFL2Q7Z4V5 671 aaPredicted RBP12.09□□□□□ -0.47
LINC02539-201ENST00000411615 AKAP12Q02952 1782 aa12.09□□□□□ -0.47
LINC02539-201ENST00000411615 NPHP3Q7Z494 1330 aa12.09□□□□□ -0.47
LINC02539-201ENST00000411615 NGDNQ8NEJ9 315 aaKnown RBP12.08□□□□□ -0.48
LINC02539-201ENST00000411615 POLR3GLQ9BT43 218 aa12.08□□□□□ -0.48
LINC02539-201ENST00000411615 ROBO1Q9Y6N7 1651 aa12.07□□□□□ -0.48
LINC02539-201ENST00000411615 MON2Q7Z3U7 1717 aa12.07□□□□□ -0.48
LINC02539-201ENST00000411615 PMFBP1Q8TBY8 1022 aa12.07□□□□□ -0.48
LINC02539-201ENST00000411615 TSPYL2Q9H2G4 693 aaPredicted RBP12.07□□□□□ -0.48
LINC02539-201ENST00000411615 PANK3Q9H999 370 aa12.07□□□□□ -0.48
LINC02539-201ENST00000411615 NHSL1Q5SYE7 1610 aa12.07□□□□□ -0.48
LINC02539-201ENST00000411615 A0A1W2PP64 1363 aa12.06□□□□□ -0.48
LINC02539-201ENST00000411615 USP6P35125 1406 aa12.06□□□□□ -0.48
LINC02539-201ENST00000411615 EDC4Q6P2E9 1401 aaKnown RBP12.06□□□□□ -0.48
LINC02539-201ENST00000411615 SSH2Q76I76 1423 aa12.06□□□□□ -0.48
LINC02539-201ENST00000411615 FOXO3O43524 673 aa12.06□□□□□ -0.48
LINC02539-201ENST00000411615 PSME1Q06323 249 aa12.06□□□□□ -0.48
LINC02539-201ENST00000411615 SOS2Q07890 1332 aaPredicted RBP12.06□□□□□ -0.48
LINC02539-201ENST00000411615 KTN1Q86UP2 1357 aaKnown RBP12.05□□□□□ -0.48
LINC02539-201ENST00000411615 AHDC1Q5TGY3 1603 aaPredicted RBP12.05□□□□□ -0.48
LINC02539-201ENST00000411615 PER1O15534 1290 aaPredicted RBP12.05□□□□□ -0.48
LINC02539-201ENST00000411615 TTC21AQ8NDW8 1320 aa12.05□□□□□ -0.48
LINC02539-201ENST00000411615 SBNO1A3KN83 1393 aa12.05□□□□□ -0.48
LINC02539-201ENST00000411615 DDX10Q13206 875 aaKnown RBP12.04□□□□□ -0.48
LINC02539-201ENST00000411615 KRT28Q7Z3Y7 464 aa12.04□□□□□ -0.48
LINC02539-201ENST00000411615 CARD14Q9BXL6 1004 aa12.04□□□□□ -0.48
LINC02539-201ENST00000411615 PXDNQ92626 1479 aa12.03□□□□□ -0.48
LINC02539-201ENST00000411615 NRKQ7Z2Y5 1582 aa12.03□□□□□ -0.48
LINC02539-201ENST00000411615 NPC1L1Q9UHC9 1359 aa12.03□□□□□ -0.48
LINC02539-201ENST00000411615 TRPM3Q9HCF6 1732 aaPredicted RBP12.03□□□□□ -0.48
LINC02539-201ENST00000411615 PIP4K2BP78356 416 aa12.02□□□□□ -0.49
LINC02539-201ENST00000411615 RASEFQ8IZ41 740 aa12.02□□□□□ -0.49
LINC02539-201ENST00000411615 KNSTRNQ9Y448 316 aa12.02□□□□□ -0.49
LINC02539-201ENST00000411615 TTC21BQ7Z4L5 1316 aa12.02□□□□□ -0.49
LINC02539-201ENST00000411615 CGNL1Q0VF96 1302 aa12.01□□□□□ -0.49
LINC02539-201ENST00000411615 NSD2O96028 1365 aa12.01□□□□□ -0.49
LINC02539-201ENST00000411615 NSD3Q9BZ95 1437 aa12.01□□□□□ -0.49
LINC02539-201ENST00000411615 PLCD3Q8N3E9 789 aa12□□□□□ -0.49
LINC02539-201ENST00000411615 FBXO41Q8TF61 875 aa12□□□□□ -0.49
LINC02539-201ENST00000411615 LRRC59Q96AG4 307 aaKnown RBP12□□□□□ -0.49
LINC02539-201ENST00000411615 SPATA31A3Q5VYP0 1347 aa12□□□□□ -0.49
LINC02539-201ENST00000411615 USP31Q70CQ4 1352 aa12□□□□□ -0.49
LINC02539-201ENST00000411615 ALS2Q96Q42 1657 aa12□□□□□ -0.49
LINC02539-201ENST00000411615 PHLPP1O60346 1717 aa12□□□□□ -0.49
LINC02539-201ENST00000411615 FYB1O15117 783 aa11.99□□□□□ -0.49
LINC02539-201ENST00000411615 AMER1Q5JTC6 1135 aaPredicted RBP11.99□□□□□ -0.49
LINC02539-201ENST00000411615 DDX17Q92841 729 aaKnown RBP11.99□□□□□ -0.49
LINC02539-201ENST00000411615 ARHGEF10O15013 1369 aa11.99□□□□□ -0.49
LINC02539-201ENST00000411615 TNS3Q68CZ2 1445 aa11.99□□□□□ -0.49
LINC02539-201ENST00000411615 USP54Q70EL1 1684 aa11.99□□□□□ -0.49
LINC02539-201ENST00000411615 COL16A1Q07092 1604 aaPredicted RBP11.98□□□□□ -0.49
LINC02539-201ENST00000411615 KIF20BQ96Q89 1820 aa11.97□□□□□ -0.49
LINC02539-201ENST00000411615 PAK3O75914 559 aaPredicted RBP11.97□□□□□ -0.49
LINC02539-201ENST00000411615 XPCQ01831 940 aaPredicted RBP11.97□□□□□ -0.49
LINC02539-201ENST00000411615 NLRP13Q86W25 1043 aa11.97□□□□□ -0.49
LINC02539-201ENST00000411615 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.97□□□□□ -0.49
LINC02539-201ENST00000411615 ABTB2Q8N961 1025 aa11.97□□□□□ -0.49
LINC02539-201ENST00000411615 PIK3C2AO00443 1686 aa11.97□□□□□ -0.49
LINC02539-201ENST00000411615 MS4A3Q96HJ5 214 aa11.96□□□□□ -0.49
LINC02539-201ENST00000411615 ANKRD26Q9UPS8 1709 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms