RNA–Protein interactions for RNA: ENST00000411042.1

RN7SKP228-201, Transcript of RNA, 7SK small nuclear pseudogene 228, humanhuman

BASIC

Gene RN7SKP228, Length 263 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP228-201ENST00000411042 NUDT16Q96DE0 195 aaKnown RBP14.09□□□□□ -0.15
RN7SKP228-201ENST00000411042 SLC26A8Q96RN1 970 aa14.09□□□□□ -0.15
RN7SKP228-201ENST00000411042 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.09□□□□□ -0.15
RN7SKP228-201ENST00000411042 CHD2O14647 1828 aaKnown RBP14.08□□□□□ -0.15
RN7SKP228-201ENST00000411042 ANKARQ7Z5J8 1434 aa14.08□□□□□ -0.15
RN7SKP228-201ENST00000411042 FYB1O15117 783 aa14.08□□□□□ -0.16
RN7SKP228-201ENST00000411042 CFAP53Q96M91 514 aa14.08□□□□□ -0.16
RN7SKP228-201ENST00000411042 PPIP5K1Q6PFW1 1433 aa14.07□□□□□ -0.16
RN7SKP228-201ENST00000411042 CNGB1Q14028 1251 aaPredicted RBP14.07□□□□□ -0.16
RN7SKP228-201ENST00000411042 ZBTB12Q9Y330 459 aaPredicted RBP14.07□□□□□ -0.16
RN7SKP228-201ENST00000411042 TOPAZ1Q8N9V7 1692 aa14.07□□□□□ -0.16
RN7SKP228-201ENST00000411042 AKAP12Q02952 1782 aa14.06□□□□□ -0.16
RN7SKP228-201ENST00000411042 ITSN1Q15811 1721 aa14.06□□□□□ -0.16
RN7SKP228-201ENST00000411042 MON2Q7Z3U7 1717 aa14.06□□□□□ -0.16
RN7SKP228-201ENST00000411042 NPHP4O75161 1426 aaPredicted RBP14.06□□□□□ -0.16
RN7SKP228-201ENST00000411042 SPINK5Q9NQ38 1064 aaPredicted RBP14.05□□□□□ -0.16
RN7SKP228-201ENST00000411042 ADAMTS8Q9UP79 889 aa14.05□□□□□ -0.16
RN7SKP228-201ENST00000411042 KIF20BQ96Q89 1820 aa14.05□□□□□ -0.16
RN7SKP228-201ENST00000411042 AATKQ6ZMQ8 1374 aa14.05□□□□□ -0.16
RN7SKP228-201ENST00000411042 NUDCQ9Y266 331 aa14.04□□□□□ -0.16
RN7SKP228-201ENST00000411042 NEFLP07196 543 aa14.03□□□□□ -0.16
RN7SKP228-201ENST00000411042 PNPLA6Q8IY17 1366 aa14.03□□□□□ -0.16
RN7SKP228-201ENST00000411042 KCNA6P17658 529 aa14.02□□□□□ -0.17
RN7SKP228-201ENST00000411042 HAP1P54257 671 aaPredicted RBP14.02□□□□□ -0.17
RN7SKP228-201ENST00000411042 NWD1Q149M9 1564 aa14.01□□□□□ -0.17
RN7SKP228-201ENST00000411042 NCOA3Q9Y6Q9 1424 aa14.01□□□□□ -0.17
RN7SKP228-201ENST00000411042 TTC21AQ8NDW8 1320 aa14.01□□□□□ -0.17
RN7SKP228-201ENST00000411042 PRR36Q9H6K5 1346 aa14.01□□□□□ -0.17
RN7SKP228-201ENST00000411042 CAPN15O75808 1086 aa14.01□□□□□ -0.17
RN7SKP228-201ENST00000411042 MTHFSP49914 203 aa14.01□□□□□ -0.17
RN7SKP228-201ENST00000411042 PNNQ9H307 717 aaKnown RBP14□□□□□ -0.17
RN7SKP228-201ENST00000411042 SSH2Q76I76 1423 aa13.99□□□□□ -0.17
RN7SKP228-201ENST00000411042 RNF123Q5XPI4 1314 aa13.99□□□□□ -0.17
RN7SKP228-201ENST00000411042 NKTRP30414 1462 aaKnown RBP13.99□□□□□ -0.17
RN7SKP228-201ENST00000411042 USP6P35125 1406 aa13.98□□□□□ -0.17
RN7SKP228-201ENST00000411042 SHPRHQ149N8 1683 aa13.98□□□□□ -0.17
RN7SKP228-201ENST00000411042 ZNF521Q96K83 1311 aa13.98□□□□□ -0.17
RN7SKP228-201ENST00000411042 GGNBP2Q9H3C7 697 aa13.98□□□□□ -0.17
RN7SKP228-201ENST00000411042 FMN2Q9NZ56 1722 aa13.98□□□□□ -0.17
RN7SKP228-201ENST00000411042 ADGRL3Q9HAR2 1447 aa13.98□□□□□ -0.17
RN7SKP228-201ENST00000411042 NRKQ7Z2Y5 1582 aa13.97□□□□□ -0.17
RN7SKP228-201ENST00000411042 USP31Q70CQ4 1352 aa13.96□□□□□ -0.17
RN7SKP228-201ENST00000411042 ACEP12821 1306 aa13.96□□□□□ -0.17
RN7SKP228-201ENST00000411042 LRRC7Q96NW7 1537 aa13.96□□□□□ -0.17
RN7SKP228-201ENST00000411042 COL3A1P02461 1466 aaPredicted RBP13.96□□□□□ -0.17
RN7SKP228-201ENST00000411042 CCDC27Q2M243 656 aa13.96□□□□□ -0.17
RN7SKP228-201ENST00000411042 RUNDC1Q96C34 613 aa13.96□□□□□ -0.17
RN7SKP228-201ENST00000411042 COG3Q96JB2 828 aa13.96□□□□□ -0.17
RN7SKP228-201ENST00000411042 RNF39Q9H2S5 420 aa13.96□□□□□ -0.17
RN7SKP228-201ENST00000411042 TTC21BQ7Z4L5 1316 aa13.95□□□□□ -0.18
RN7SKP228-201ENST00000411042 SUPT16HQ9Y5B9 1047 aaKnown RBP13.95□□□□□ -0.18
RN7SKP228-201ENST00000411042 LMTK3Q96Q04 1460 aa13.94□□□□□ -0.18
RN7SKP228-201ENST00000411042 CDK12Q9NYV4 1490 aaPredicted RBP13.94□□□□□ -0.18
RN7SKP228-201ENST00000411042 OVOS2A0A0J9YW53 1432 aa13.93□□□□□ -0.18
RN7SKP228-201ENST00000411042 OVOS2Q6IE36 1432 aa13.93□□□□□ -0.18
RN7SKP228-201ENST00000411042 MAP2P11137 1827 aaKnown RBP13.93□□□□□ -0.18
RN7SKP228-201ENST00000411042 GOLGA2Q08379 1002 aa13.93□□□□□ -0.18
RN7SKP228-201ENST00000411042 USP54Q70EL1 1684 aa13.93□□□□□ -0.18
RN7SKP228-201ENST00000411042 KIF24Q5T7B8 1368 aa13.93□□□□□ -0.18
RN7SKP228-201ENST00000411042 DCCP43146 1447 aa13.92□□□□□ -0.18
RN7SKP228-201ENST00000411042 DIAPH1O60610 1272 aaKnown RBP13.92□□□□□ -0.18
RN7SKP228-201ENST00000411042 TRMT2AQ8IZ69 625 aaKnown RBP13.92□□□□□ -0.18
RN7SKP228-201ENST00000411042 POLKQ9UBT6 870 aa13.92□□□□□ -0.18
RN7SKP228-201ENST00000411042 NALCNQ8IZF0 1738 aa13.92□□□□□ -0.18
RN7SKP228-201ENST00000411042 FCHSD2O94868 740 aa13.91□□□□□ -0.18
RN7SKP228-201ENST00000411042 TNNT2P45379 298 aaPredicted RBP13.91□□□□□ -0.18
RN7SKP228-201ENST00000411042 WDR63Q8IWG1 891 aa13.91□□□□□ -0.18
RN7SKP228-201ENST00000411042 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.91□□□□□ -0.18
RN7SKP228-201ENST00000411042 E9PSI1 815 aa13.9□□□□□ -0.18
RN7SKP228-201ENST00000411042 APAF1O14727 1248 aa13.9□□□□□ -0.18
RN7SKP228-201ENST00000411042 HSPA2P54652 639 aa13.9□□□□□ -0.18
RN7SKP228-201ENST00000411042 C1QBPQ07021 282 aaKnown RBP13.9□□□□□ -0.18
RN7SKP228-201ENST00000411042 IQSEC2Q5JU85 1478 aa13.9□□□□□ -0.18
RN7SKP228-201ENST00000411042 NCKAP5LQ9HCH0 1330 aa13.9□□□□□ -0.19
RN7SKP228-201ENST00000411042 NME9Q86XW9 330 aa13.89□□□□□ -0.19
RN7SKP228-201ENST00000411042 VSIG10Q8N0Z9 540 aa13.89□□□□□ -0.19
RN7SKP228-201ENST00000411042 NGDNQ8NEJ9 315 aaKnown RBP13.89□□□□□ -0.19
RN7SKP228-201ENST00000411042 U2AF1L5P0DN76 240 aaPredicted RBP13.88□□□□□ -0.19
RN7SKP228-201ENST00000411042 U2AF1Q01081 240 aaKnown RBP eCLIP13.88□□□□□ -0.19
RN7SKP228-201ENST00000411042 SLFN5Q08AF3 891 aa13.88□□□□□ -0.19
RN7SKP228-201ENST00000411042 PELP1Q8IZL8 1130 aaKnown RBP13.88□□□□□ -0.19
RN7SKP228-201ENST00000411042 C19orf44Q9H6X5 657 aa13.88□□□□□ -0.19
RN7SKP228-201ENST00000411042 RGPD8O14715 1765 aaPredicted RBP13.88□□□□□ -0.19
RN7SKP228-201ENST00000411042 CERKQ8TCT0 537 aa13.87□□□□□ -0.19
RN7SKP228-201ENST00000411042 SPOCK2Q92563 424 aa13.87□□□□□ -0.19
RN7SKP228-201ENST00000411042 PLEKHF1Q96S99 279 aa13.87□□□□□ -0.19
RN7SKP228-201ENST00000411042 RCAN3Q9UKA8 241 aa13.87□□□□□ -0.19
RN7SKP228-201ENST00000411042 PHF8Q9UPP1 1060 aa13.87□□□□□ -0.19
RN7SKP228-201ENST00000411042 DUSP27Q5VZP5 1158 aa13.86□□□□□ -0.19
RN7SKP228-201ENST00000411042 WWC1Q8IX03 1113 aa13.86□□□□□ -0.19
RN7SKP228-201ENST00000411042 TCP11L2Q8N4U5 519 aa13.86□□□□□ -0.19
RN7SKP228-201ENST00000411042 IL16Q14005 1332 aa13.86□□□□□ -0.19
RN7SKP228-201ENST00000411042 MST1RQ04912 1400 aa13.85□□□□□ -0.19
RN7SKP228-201ENST00000411042 PROSER2Q86WR7 435 aaPredicted RBP13.85□□□□□ -0.19
RN7SKP228-201ENST00000411042 KLHL34Q8N239 644 aa13.85□□□□□ -0.19
RN7SKP228-201ENST00000411042 NEFMP07197 916 aa13.84□□□□□ -0.19
RN7SKP228-201ENST00000411042 IL13P35225 146 aa13.84□□□□□ -0.19
RN7SKP228-201ENST00000411042 KIF1AQ12756 1690 aa13.84□□□□□ -0.19
RN7SKP228-201ENST00000411042 CT47B1P0C2W7 299 aaPredicted RBP13.83□□□□□ -0.2
RN7SKP228-201ENST00000411042 CCDC146Q8IYE0 955 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms