RNA–Protein interactions for RNA: ENST00000409627.6

SUMO1-208, Transcript of small ubiquitin-like modifier 1, humanhuman

TSL 3

Gene SUMO1, Length 722 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO1-208ENST00000409627 EDC4Q6P2E9 1401 aaKnown RBP22.97■■□□□ 1.27
SUMO1-208ENST00000409627 XPCQ01831 940 aaPredicted RBP22.96■■□□□ 1.27
SUMO1-208ENST00000409627 TNS3Q68CZ2 1445 aa22.95■■□□□ 1.26
SUMO1-208ENST00000409627 PANK3Q9H999 370 aa22.93■■□□□ 1.26
SUMO1-208ENST00000409627 PIK3C2AO00443 1686 aa22.93■■□□□ 1.26
SUMO1-208ENST00000409627 KIF20BQ96Q89 1820 aa22.92■■□□□ 1.26
SUMO1-208ENST00000409627 HSPA1LP34931 641 aa22.92■■□□□ 1.26
SUMO1-208ENST00000409627 SHPRHQ149N8 1683 aa22.92■■□□□ 1.26
SUMO1-208ENST00000409627 NSD3Q9BZ95 1437 aa22.91■■□□□ 1.26
SUMO1-208ENST00000409627 SPATA31A3Q5VYP0 1347 aa22.91■■□□□ 1.26
SUMO1-208ENST00000409627 TTC21BQ7Z4L5 1316 aa22.91■■□□□ 1.26
SUMO1-208ENST00000409627 TTC21AQ8NDW8 1320 aa22.91■■□□□ 1.26
SUMO1-208ENST00000409627 LRRC59Q96AG4 307 aaKnown RBP22.91■■□□□ 1.26
SUMO1-208ENST00000409627 USP54Q70EL1 1684 aa22.9■■□□□ 1.26
SUMO1-208ENST00000409627 COL22A1Q8NFW1 1626 aaPredicted RBP22.9■■□□□ 1.26
SUMO1-208ENST00000409627 CARD14Q9BXL6 1004 aa22.9■■□□□ 1.26
SUMO1-208ENST00000409627 PAK3O75914 559 aaPredicted RBP22.89■■□□□ 1.25
SUMO1-208ENST00000409627 ARHGEF10O15013 1369 aa22.89■■□□□ 1.25
SUMO1-208ENST00000409627 MED1Q15648 1581 aaPredicted RBP22.88■■□□□ 1.25
SUMO1-208ENST00000409627 MARF1Q9Y4F3 1742 aaKnown RBP22.88■■□□□ 1.25
SUMO1-208ENST00000409627 CRYBG1Q9Y4K1 1723 aa22.87■■□□□ 1.25
SUMO1-208ENST00000409627 ANKRD26Q9UPS8 1709 aa22.86■■□□□ 1.25
SUMO1-208ENST00000409627 PNPLA6Q8IY17 1366 aa22.86■■□□□ 1.25
SUMO1-208ENST00000409627 ABCA3Q99758 1704 aa22.85■■□□□ 1.25
SUMO1-208ENST00000409627 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.85■■□□□ 1.25
SUMO1-208ENST00000409627 JCADQ9P266 1359 aa22.85■■□□□ 1.25
SUMO1-208ENST00000409627 PHRF1Q9P1Y6 1649 aaKnown RBP22.83■■□□□ 1.25
SUMO1-208ENST00000409627 PER1O15534 1290 aaPredicted RBP22.83■■□□□ 1.25
SUMO1-208ENST00000409627 ABTB2Q8N961 1025 aa22.83■■□□□ 1.25
SUMO1-208ENST00000409627 USP31Q70CQ4 1352 aa22.83■■□□□ 1.25
SUMO1-208ENST00000409627 CGNL1Q0VF96 1302 aa22.82■■□□□ 1.24
SUMO1-208ENST00000409627 DDX10Q13206 875 aaKnown RBP22.82■■□□□ 1.24
SUMO1-208ENST00000409627 LMOD2Q6P5Q4 547 aa22.82■■□□□ 1.24
SUMO1-208ENST00000409627 KNSTRNQ9Y448 316 aa22.82■■□□□ 1.24
SUMO1-208ENST00000409627 NME9Q86XW9 330 aa22.81■■□□□ 1.24
SUMO1-208ENST00000409627 OVOS2A0A0J9YW53 1432 aa22.81■■□□□ 1.24
SUMO1-208ENST00000409627 OVOS2Q6IE36 1432 aa22.81■■□□□ 1.24
SUMO1-208ENST00000409627 NSD2O96028 1365 aa22.8■■□□□ 1.24
SUMO1-208ENST00000409627 SLIT3O75094 1523 aa22.79■■□□□ 1.24
SUMO1-208ENST00000409627 FYB1O15117 783 aa22.79■■□□□ 1.24
SUMO1-208ENST00000409627 NLRP13Q86W25 1043 aa22.79■■□□□ 1.24
SUMO1-208ENST00000409627 USP19O94966 1318 aa22.79■■□□□ 1.24
SUMO1-208ENST00000409627 NLRP6P59044 892 aa22.78■■□□□ 1.24
SUMO1-208ENST00000409627 NPC1L1Q9UHC9 1359 aa22.77■■□□□ 1.24
SUMO1-208ENST00000409627 AMER1Q5JTC6 1135 aaPredicted RBP22.77■■□□□ 1.24
SUMO1-208ENST00000409627 NUTM2GQ5VZR2 741 aa22.77■■□□□ 1.24
SUMO1-208ENST00000409627 SPATA31A6Q5VVP1 1343 aa22.76■■□□□ 1.23
SUMO1-208ENST00000409627 GGNBP2Q9H3C7 697 aa22.75■■□□□ 1.23
SUMO1-208ENST00000409627 ZRANB1Q9UGI0 708 aa22.75■■□□□ 1.23
SUMO1-208ENST00000409627 ILDR1Q86SU0 546 aaPredicted RBP22.74■■□□□ 1.23
SUMO1-208ENST00000409627 COG3Q96JB2 828 aa22.74■■□□□ 1.23
SUMO1-208ENST00000409627 NFAT5O94916 1531 aa22.72■■□□□ 1.23
SUMO1-208ENST00000409627 CABLES1Q8TDN4 633 aa22.71■■□□□ 1.23
SUMO1-208ENST00000409627 KCNH5Q8NCM2 988 aa22.7■■□□□ 1.22
SUMO1-208ENST00000409627 LRP6O75581 1613 aa22.69■■□□□ 1.22
SUMO1-208ENST00000409627 LTN1O94822 1766 aa22.68■■□□□ 1.22
SUMO1-208ENST00000409627 PLEKHG5O94827 1062 aa22.68■■□□□ 1.22
SUMO1-208ENST00000409627 GCP02774 474 aa22.68■■□□□ 1.22
SUMO1-208ENST00000409627 HAP1P54257 671 aaPredicted RBP22.67■■□□□ 1.22
SUMO1-208ENST00000409627 CC2D1BQ5T0F9 858 aaKnown RBP22.66■■□□□ 1.22
SUMO1-208ENST00000409627 CPDO75976 1380 aa22.65■■□□□ 1.22
SUMO1-208ENST00000409627 MORC1Q86VD1 984 aa22.65■■□□□ 1.22
SUMO1-208ENST00000409627 MAP2P11137 1827 aaKnown RBP22.65■■□□□ 1.22
SUMO1-208ENST00000409627 AATKQ6ZMQ8 1374 aa22.64■■□□□ 1.22
SUMO1-208ENST00000409627 NUTM2BA6NNL0 878 aaPredicted RBP22.64■■□□□ 1.21
SUMO1-208ENST00000409627 NUTM2EB1AL46 878 aaPredicted RBP22.64■■□□□ 1.21
SUMO1-208ENST00000409627 NUTM2AQ8IVF1 878 aaPredicted RBP22.64■■□□□ 1.21
SUMO1-208ENST00000409627 COL14A1Q05707 1796 aaKnown RBP22.63■■□□□ 1.21
SUMO1-208ENST00000409627 ABCC6O95255 1503 aa22.62■■□□□ 1.21
SUMO1-208ENST00000409627 PARD3Q8TEW0 1356 aa22.62■■□□□ 1.21
SUMO1-208ENST00000409627 KIAA0232Q92628 1395 aa22.62■■□□□ 1.21
SUMO1-208ENST00000409627 PLCH1Q4KWH8 1693 aa22.62■■□□□ 1.21
SUMO1-208ENST00000409627 COL18A1P39060 1754 aa22.61■■□□□ 1.21
SUMO1-208ENST00000409627 SOX12O15370 315 aa22.61■■□□□ 1.21
SUMO1-208ENST00000409627 LMO7Q8WWI1 1683 aa22.61■■□□□ 1.21
SUMO1-208ENST00000409627 ZC3H6P61129 1189 aaKnown RBP22.6■■□□□ 1.21
SUMO1-208ENST00000409627 NWD2Q9ULI1 1742 aa22.6■■□□□ 1.21
SUMO1-208ENST00000409627 ADAMTS2O95450 1211 aa22.59■■□□□ 1.21
SUMO1-208ENST00000409627 ARHGEF25Q86VW2 580 aa22.59■■□□□ 1.21
SUMO1-208ENST00000409627 PEAK1Q9H792 1746 aa22.58■■□□□ 1.21
SUMO1-208ENST00000409627 CNGB1Q14028 1251 aaPredicted RBP22.58■■□□□ 1.21
SUMO1-208ENST00000409627 PRDM11Q9NQV5 511 aa22.58■■□□□ 1.21
SUMO1-208ENST00000409627 SMG6Q86US8 1419 aaKnown RBP22.57■■□□□ 1.2
SUMO1-208ENST00000409627 TNNT2P45379 298 aaPredicted RBP22.57■■□□□ 1.2
SUMO1-208ENST00000409627 RTL1A6NKG5 1358 aa22.57■■□□□ 1.2
SUMO1-208ENST00000409627 KIF24Q5T7B8 1368 aa22.57■■□□□ 1.2
SUMO1-208ENST00000409627 MAP3K19Q56UN5 1328 aa22.57■■□□□ 1.2
SUMO1-208ENST00000409627 RGPD5Q99666 1765 aa22.56■■□□□ 1.2
SUMO1-208ENST00000409627 FBLN1P23142 703 aa22.56■■□□□ 1.2
SUMO1-208ENST00000409627 RALBP1Q15311 655 aa22.56■■□□□ 1.2
SUMO1-208ENST00000409627 RRS1Q15050 365 aaKnown RBP22.55■■□□□ 1.2
SUMO1-208ENST00000409627 MEX3CQ5U5Q3 659 aaKnown RBP22.55■■□□□ 1.2
SUMO1-208ENST00000409627 NRAPQ86VF7 1730 aa22.54■■□□□ 1.2
SUMO1-208ENST00000409627 SLIT2O94813 1529 aa22.54■■□□□ 1.2
SUMO1-208ENST00000409627 FAM83GA6ND36 823 aa22.54■■□□□ 1.2
SUMO1-208ENST00000409627 POLKQ9UBT6 870 aa22.54■■□□□ 1.2
SUMO1-208ENST00000409627 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.54■■□□□ 1.2
SUMO1-208ENST00000409627 PRKRIP1Q9H875 184 aaPredicted RBP22.53■■□□□ 1.2
SUMO1-208ENST00000409627 CAMTA1Q9Y6Y1 1673 aa22.52■■□□□ 1.2
SUMO1-208ENST00000409627 FLT4P35916 1363 aa22.52■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms